Wall clock time and date at job start Sat Mar 6 2021 13:16:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.46954 * 2 1 4 4 C 1.50705 * 109.47514 * 239.99945 * 2 1 3 5 5 C 1.38241 * 119.97218 * 119.99654 * 4 2 1 6 6 C 1.38287 * 120.10676 * 180.02562 * 5 4 2 7 7 C 1.38116 * 120.06102 * 359.97438 * 6 5 4 8 8 C 1.38755 * 119.94123 * 0.02562 * 7 6 5 9 9 O 1.35903 * 120.05492 * 179.72926 * 8 7 6 10 10 C 1.42902 * 117.00224 * 359.97438 * 9 8 7 11 11 C 1.50692 * 109.47301 * 180.02562 * 10 9 8 12 12 O 1.21286 * 120.00333 * 359.97438 * 11 10 9 13 13 N 1.34782 * 120.00090 * 180.02562 * 11 10 9 14 14 C 1.46498 * 119.99958 * 179.97438 * 13 11 10 15 15 H 1.08997 * 112.85508 * 336.20126 * 14 13 11 16 16 C 1.53785 * 113.61005 * 107.50631 * 14 13 11 17 17 C 1.53778 * 87.08057 * 89.11450 * 16 14 13 18 18 H 1.08999 * 113.61212 * 270.87940 * 17 16 14 19 19 C 1.50706 * 113.68733 * 139.99384 * 17 16 14 20 20 C 1.38326 * 120.00618 * 142.46516 * 19 17 16 21 21 Cl 1.73601 * 120.01592 * 359.94953 * 20 19 17 22 22 C 1.38379 * 119.97374 * 179.97438 * 20 19 17 23 23 C 1.38190 * 119.98436 * 359.97438 * 22 20 19 24 24 C 1.38259 * 120.01548 * 0.02562 * 23 22 20 25 25 C 1.38222 * 120.02765 * 359.74133 * 24 23 22 26 26 C 1.53779 * 87.08528 * 25.43196 * 17 16 14 27 27 C 1.38168 * 119.97009 * 299.99850 * 4 2 1 28 28 H 0.96703 * 113.99630 * 60.00341 * 1 2 3 29 29 H 1.09001 * 109.47639 * 119.99829 * 2 1 3 30 30 H 1.48488 * 110.00281 * 59.99717 * 3 2 1 31 31 H 1.48503 * 109.99947 * 181.31950 * 3 2 1 32 32 H 1.07999 * 119.94448 * 0.02583 * 5 4 2 33 33 H 1.08002 * 119.96764 * 179.97438 * 6 5 4 34 34 H 1.08000 * 120.03192 * 180.02562 * 7 6 5 35 35 H 1.09004 * 109.46917 * 300.00870 * 10 9 8 36 36 H 1.08998 * 109.46815 * 60.00240 * 10 9 8 37 37 H 0.97004 * 119.99396 * 0.02562 * 13 11 10 38 38 H 1.09003 * 113.60934 * 203.66518 * 16 14 13 39 39 H 1.09002 * 113.61233 * 334.56392 * 16 14 13 40 40 H 1.07997 * 120.00465 * 179.97438 * 22 20 19 41 41 H 1.07999 * 119.99009 * 179.97438 * 23 22 20 42 42 H 1.07996 * 119.99039 * 180.02562 * 24 23 22 43 43 H 1.07999 * 119.99824 * 180.27662 * 25 24 23 44 44 H 1.08998 * 113.61636 * 220.01997 * 26 17 16 45 45 H 1.09000 * 113.61088 * 89.11364 * 26 17 16 46 46 H 1.08008 * 120.02680 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7262 -0.0380 -2.1401 6 6 3.1883 -0.6870 -3.2703 7 6 2.8572 -2.0093 -3.4929 8 6 2.0597 -2.6864 -2.5814 9 8 1.7280 -3.9859 -2.8009 10 6 2.2348 -4.5928 -3.9912 11 6 1.7665 -6.0232 -4.0644 12 8 1.0678 -6.4785 -3.1837 13 7 2.1248 -6.7971 -5.1081 14 6 1.6700 -8.1879 -5.1790 15 1 1.4227 -8.6027 -4.2019 16 6 0.5872 -8.4283 -6.2443 17 6 1.7325 -8.6964 -7.2348 18 1 2.0880 -7.8007 -7.7441 19 6 1.4605 -9.8381 -8.1802 20 6 1.8817 -9.7623 -9.4956 21 17 2.7226 -8.3516 -10.0583 22 6 1.6320 -10.8112 -10.3630 23 6 0.9626 -11.9338 -9.9146 24 6 0.5418 -12.0090 -8.5997 25 6 0.7951 -10.9637 -7.7315 26 6 2.5861 -9.0936 -6.0189 27 6 1.5974 -2.0333 -1.4485 28 1 -0.3933 0.4417 -0.7651 29 1 1.7924 -0.5138 0.8900 30 1 1.5614 2.4679 1.2083 31 1 3.5346 1.7704 -0.0321 32 1 2.9865 0.9959 -1.9676 33 1 3.8087 -0.1594 -3.9797 34 1 3.2187 -2.5159 -4.3756 35 1 1.8703 -4.0464 -4.8611 36 1 3.3244 -4.5672 -3.9765 37 1 2.6846 -6.4333 -5.8119 38 1 -0.0330 -9.3026 -6.0468 39 1 0.0035 -7.5389 -6.4820 40 1 1.9603 -10.7523 -11.3902 41 1 0.7673 -12.7523 -10.5915 42 1 0.0190 -12.8867 -8.2495 43 1 0.4702 -11.0248 -6.7034 44 1 3.6161 -8.7413 -6.0747 45 1 2.5123 -10.1498 -5.7599 46 1 0.9761 -2.5580 -0.7377 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:22 Heat of formation + Delta-G solvation = -20.778067 kcal Electronic energy + Delta-G solvation = -29624.995822 eV Core-core repulsion = 25280.515840 eV Total energy + Delta-G solvation = -4344.479982 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.112 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -41.81656 -41.29825 -40.38895 -39.22167 -38.61185 -37.41403 -37.22965 -34.77417 -32.47522 -32.10177 -31.67368 -31.47781 -29.27659 -26.86367 -26.75413 -26.10040 -23.81657 -23.67433 -22.99710 -22.45736 -21.67510 -20.21671 -19.35074 -18.67761 -18.17287 -17.66929 -17.47903 -17.33622 -17.05172 -16.81195 -16.44217 -16.37631 -16.17379 -15.66966 -15.50101 -15.15118 -15.05941 -14.81232 -14.77417 -14.70438 -14.41846 -14.20146 -14.02834 -13.66752 -13.45628 -13.33083 -12.99396 -12.91969 -12.70363 -12.61969 -12.48247 -12.17218 -12.13259 -12.00268 -11.79199 -11.68442 -11.53056 -11.29095 -11.06575 -10.51463 -10.22393 -9.92624 -9.84217 -9.58867 -9.29615 -4.98957 0.17554 0.19873 0.28075 0.38164 1.16257 1.27343 1.37195 1.44952 1.65021 1.96936 2.54815 2.62258 2.66786 3.38627 3.45374 3.52173 3.58470 3.64131 3.66748 3.83085 3.84833 3.93432 3.98477 4.05893 4.09845 4.11881 4.15903 4.23994 4.34958 4.38401 4.39406 4.48984 4.59443 4.62616 4.70929 4.74268 4.79773 4.88200 4.96321 4.97298 4.99969 5.08975 5.23606 5.29149 5.36170 5.38360 5.44131 5.48795 5.55715 5.68735 5.85937 6.24599 6.41753 6.74175 7.06378 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.086 4.086 3 Si 0.796 3.204 4 C -0.084 4.084 5 C -0.157 4.157 6 C -0.070 4.070 7 C -0.203 4.203 8 C 0.113 3.887 9 O -0.323 6.323 10 C 0.038 3.962 11 C 0.516 3.484 12 O -0.570 6.570 13 N -0.693 5.693 14 C 0.117 3.883 15 H 0.088 0.912 16 C -0.140 4.140 17 C -0.075 4.075 18 H 0.108 0.892 19 C -0.070 4.070 20 C -0.049 4.049 21 Cl -0.073 7.073 22 C -0.122 4.122 23 C -0.117 4.117 24 C -0.117 4.117 25 C -0.112 4.112 26 C -0.121 4.121 27 C -0.150 4.150 28 H 0.395 0.605 29 H 0.101 0.899 30 H -0.301 1.301 31 H -0.280 1.280 32 H 0.150 0.850 33 H 0.163 0.837 34 H 0.160 0.840 35 H 0.126 0.874 36 H 0.125 0.875 37 H 0.420 0.580 38 H 0.102 0.898 39 H 0.068 0.932 40 H 0.139 0.861 41 H 0.148 0.852 42 H 0.147 0.853 43 H 0.146 0.854 44 H 0.088 0.912 45 H 0.105 0.895 46 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.385 0.828 -8.060 8.781 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.195 4.195 3 Si 0.701 3.299 4 C -0.085 4.085 5 C -0.175 4.175 6 C -0.088 4.088 7 C -0.221 4.221 8 C 0.068 3.932 9 O -0.236 6.236 10 C -0.040 4.040 11 C 0.302 3.698 12 O -0.448 6.448 13 N -0.347 5.347 14 C 0.011 3.989 15 H 0.106 0.894 16 C -0.178 4.178 17 C -0.093 4.093 18 H 0.126 0.874 19 C -0.071 4.071 20 C -0.075 4.075 21 Cl -0.044 7.044 22 C -0.140 4.140 23 C -0.135 4.135 24 C -0.135 4.135 25 C -0.130 4.130 26 C -0.159 4.159 27 C -0.169 4.169 28 H 0.245 0.755 29 H 0.118 0.882 30 H -0.230 1.230 31 H -0.206 1.206 32 H 0.167 0.833 33 H 0.181 0.819 34 H 0.178 0.822 35 H 0.144 0.856 36 H 0.143 0.857 37 H 0.258 0.742 38 H 0.120 0.880 39 H 0.087 0.913 40 H 0.157 0.843 41 H 0.166 0.834 42 H 0.165 0.835 43 H 0.164 0.836 44 H 0.107 0.893 45 H 0.123 0.877 46 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 3.409 0.767 -6.405 7.296 hybrid contribution 0.229 -0.673 -0.124 0.722 sum 3.638 0.095 -6.529 7.475 Atomic orbital electron populations 1.86477 1.17400 1.82311 1.50438 1.25435 0.85303 1.11895 0.96869 0.93504 0.77728 0.74126 0.84567 1.20213 0.97890 0.93285 0.97095 1.21220 1.00118 1.00799 0.95351 1.21336 0.97206 0.93496 0.96730 1.21630 1.02423 0.96936 1.01119 1.19199 0.95773 0.82890 0.95300 1.86123 1.71376 1.23535 1.42590 1.22719 1.01974 0.90570 0.88724 1.20543 0.79690 0.87994 0.81526 1.90768 1.38792 1.75209 1.40071 1.45365 1.53326 1.11661 1.24332 1.21848 0.96315 0.81351 0.99344 0.89366 1.23560 0.96446 1.02974 0.94829 1.21695 0.97896 0.96469 0.93257 0.87421 1.19700 0.98376 0.96774 0.92249 1.21024 1.01452 0.90348 0.94705 1.98359 1.76610 1.40323 1.89150 1.21304 0.99564 0.92909 1.00238 1.21439 0.97457 0.97865 0.96780 1.21589 0.98915 0.99398 0.93575 1.21255 0.98198 0.92447 1.01132 1.23368 0.98984 1.00660 0.92877 1.20282 1.04018 0.94928 0.97626 0.75459 0.88168 1.22961 1.20624 0.83334 0.81934 0.82231 0.85606 0.85693 0.74231 0.88011 0.91291 0.84302 0.83395 0.83504 0.83607 0.89312 0.87651 0.87089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.98 12.77 -148.98 -1.90 -3.88 16 2 C -0.09 -0.18 2.82 71.24 0.20 0.02 16 3 Si 0.80 -1.51 29.79 68.60 2.04 0.53 16 4 C -0.08 -0.22 5.39 -19.88 -0.11 -0.32 16 5 C -0.16 0.31 8.67 22.28 0.19 0.51 16 6 C -0.07 0.29 10.04 22.25 0.22 0.51 16 7 C -0.20 0.48 9.04 22.36 0.20 0.68 16 8 C 0.11 0.54 6.69 22.50 0.15 0.69 16 9 O -0.32 -2.41 9.67 -73.42 -0.71 -3.12 16 10 C 0.04 -0.09 5.22 71.23 0.37 0.28 16 11 C 0.52 1.71 7.91 87.65 0.69 2.40 16 12 O -0.57 -8.62 16.10 15.99 0.26 -8.37 16 13 N -0.69 2.55 5.26 -440.03 -2.32 0.24 16 14 C 0.12 -0.24 4.33 45.52 0.20 -0.05 16 15 H 0.09 0.23 7.46 -2.39 -0.02 0.21 16 16 C -0.14 0.39 7.26 31.12 0.23 0.61 16 17 C -0.07 0.30 3.64 -11.01 -0.04 0.26 16 18 H 0.11 -0.48 6.57 -2.39 -0.02 -0.50 16 19 C -0.07 0.09 5.29 -19.84 -0.11 -0.02 16 20 C -0.05 -0.03 6.31 22.32 0.14 0.11 16 21 Cl -0.07 -0.02 27.16 -2.72 -0.07 -0.09 16 22 C -0.12 0.05 9.83 22.29 0.22 0.27 16 23 C -0.12 0.29 10.04 22.26 0.22 0.52 16 24 C -0.12 0.37 10.05 22.27 0.22 0.60 16 25 C -0.11 0.31 8.60 22.27 0.19 0.50 16 26 C -0.12 0.67 7.29 31.12 0.23 0.89 16 27 C -0.15 -1.06 9.55 22.36 0.21 -0.84 16 28 H 0.40 -2.01 8.70 -74.06 -0.64 -2.65 16 29 H 0.10 0.43 7.96 -2.39 -0.02 0.41 16 30 H -0.30 -1.75 7.11 99.48 0.71 -1.05 16 31 H -0.28 -0.48 7.11 99.48 0.71 0.23 16 32 H 0.15 -0.98 4.87 -2.91 -0.01 -0.99 16 33 H 0.16 -1.69 8.06 -2.91 -0.02 -1.72 16 34 H 0.16 -1.48 6.30 -2.91 -0.02 -1.50 16 35 H 0.13 -1.12 7.67 -2.39 -0.02 -1.14 16 36 H 0.13 -1.10 7.66 -2.39 -0.02 -1.12 16 37 H 0.42 -4.44 8.70 -92.71 -0.81 -5.25 16 38 H 0.10 -0.38 6.34 -2.39 -0.02 -0.39 16 39 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 40 H 0.14 -0.35 8.06 -2.91 -0.02 -0.38 16 41 H 0.15 -0.96 8.06 -2.91 -0.02 -0.98 16 42 H 0.15 -1.05 8.06 -2.91 -0.02 -1.08 16 43 H 0.15 -0.89 6.68 -2.91 -0.02 -0.91 16 44 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 45 H 0.11 -0.64 7.71 -2.39 -0.02 -0.66 16 46 H 0.11 1.19 8.06 -2.91 -0.02 1.17 16 Total: 0.00 -26.64 396.11 0.58 -26.06 By element: Atomic # 1 Polarization: -18.63 SS G_CDS: -0.37 Total: -19.00 kcal Atomic # 6 Polarization: 3.98 SS G_CDS: 3.64 Total: 7.63 kcal Atomic # 7 Polarization: 2.55 SS G_CDS: -2.32 Total: 0.24 kcal Atomic # 8 Polarization: -13.01 SS G_CDS: -2.35 Total: -15.36 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: 2.04 Total: 0.53 kcal Atomic # 17 Polarization: -0.02 SS G_CDS: -0.07 Total: -0.09 kcal Total: -26.64 0.58 -26.06 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.286 kcal (2) G-P(sol) polarization free energy of solvation -26.640 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.355 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.577 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.064 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.778 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds