Wall clock time and date at job start Sat Mar 6 2021 13:16:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35982 * 117.00229 * 2 1 4 4 C 1.38678 * 119.99866 * 180.02562 * 3 2 1 5 5 C 1.38153 * 119.99937 * 180.27958 * 4 3 2 6 6 C 1.50693 * 120.00251 * 179.74715 * 5 4 3 7 7 O 1.42900 * 109.47483 * 104.99592 * 6 5 4 8 8 Si 1.86303 * 109.46895 * 344.99455 * 6 5 4 9 9 C 1.38679 * 119.99479 * 359.46734 * 5 4 3 10 10 O 1.35987 * 120.00091 * 180.29897 * 9 5 4 11 11 C 1.42900 * 117.00458 * 180.22976 * 10 9 5 12 12 C 1.50698 * 109.46934 * 180.02562 * 11 10 9 13 13 O 1.21275 * 120.00149 * 0.02562 * 12 11 10 14 14 N 1.34776 * 119.99352 * 179.97438 * 12 11 10 15 15 C 1.46504 * 119.99757 * 180.02562 * 14 12 11 16 16 H 1.09003 * 112.84587 * 336.19050 * 15 14 12 17 17 C 1.53781 * 113.61622 * 107.50290 * 15 14 12 18 18 C 1.53775 * 87.07961 * 89.11842 * 17 15 14 19 19 H 1.09000 * 113.69113 * 270.86951 * 18 17 15 20 20 C 1.50704 * 113.61671 * 139.98357 * 18 17 15 21 21 C 1.38328 * 120.00805 * 142.22575 * 20 18 17 22 22 Cl 1.73597 * 120.01602 * 359.97438 * 21 20 18 23 23 C 1.38378 * 119.97083 * 179.70169 * 21 20 18 24 24 C 1.38192 * 119.98431 * 0.54984 * 23 21 20 25 25 C 1.38257 * 120.01768 * 359.74516 * 24 23 21 26 26 C 1.38224 * 120.02386 * 359.97438 * 25 24 23 27 27 C 1.53780 * 113.61305 * 205.00393 * 15 14 12 28 28 C 1.38723 * 120.00234 * 0.53255 * 9 5 4 29 29 C 1.38104 * 119.99814 * 359.74544 * 28 9 5 30 30 H 1.09003 * 109.46690 * 60.00090 * 1 2 3 31 31 H 1.09003 * 109.47071 * 179.97438 * 1 2 3 32 32 H 1.08995 * 109.46807 * 299.99940 * 1 2 3 33 33 H 1.08002 * 119.99875 * 359.97438 * 4 3 2 34 34 H 1.09006 * 109.47048 * 224.99713 * 6 5 4 35 35 H 0.96703 * 113.99645 * 60.00008 * 7 6 5 36 36 H 1.48501 * 109.99718 * 178.68378 * 8 6 5 37 37 H 1.48500 * 110.00049 * 299.99992 * 8 6 5 38 38 H 1.09003 * 109.46572 * 300.00181 * 11 10 9 39 39 H 1.09001 * 109.46914 * 59.99879 * 11 10 9 40 40 H 0.96998 * 120.00509 * 0.02562 * 14 12 11 41 41 H 1.09006 * 113.61219 * 203.66540 * 17 15 14 42 42 H 1.08994 * 113.61106 * 334.56612 * 17 15 14 43 43 H 1.07995 * 120.00746 * 180.27257 * 23 21 20 44 44 H 1.07999 * 119.99079 * 179.76607 * 24 23 21 45 45 H 1.07994 * 119.99034 * 179.97438 * 25 24 23 46 46 H 1.07998 * 119.99319 * 180.02562 * 26 25 24 47 47 H 1.08992 * 113.61879 * 25.42754 * 27 15 14 48 48 H 1.09006 * 113.61405 * 156.25381 * 27 15 14 49 49 H 1.08001 * 119.99759 * 179.72754 * 28 9 5 50 50 H 1.08005 * 119.99845 * 180.02562 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4313 1.2841 -0.0005 5 6 4.0586 2.5150 0.0053 6 6 5.5634 2.5938 0.0105 7 8 6.0252 2.9708 -1.2882 8 14 6.2708 0.9306 0.4625 9 6 3.3033 3.6780 0.0005 10 8 3.9206 4.8897 0.0001 11 6 3.0807 6.0458 0.0002 12 6 3.9350 7.2873 -0.0009 13 8 5.1440 7.1914 -0.0022 14 7 3.3554 8.5040 -0.0016 15 6 4.1858 9.7109 -0.0032 16 1 5.1831 9.5390 0.4017 17 6 4.1850 10.4575 -1.3476 18 6 2.9642 11.2338 -0.8262 19 1 2.0116 10.7534 -1.0495 20 6 2.9802 12.6970 -1.1865 21 6 1.8025 13.3393 -1.5241 22 17 0.3057 12.4600 -1.5334 23 6 1.8172 14.6843 -1.8488 24 6 3.0099 15.3823 -1.8468 25 6 4.1875 14.7384 -1.5152 26 6 4.1727 13.3962 -1.1851 27 6 3.4834 10.9428 0.5918 28 6 1.9180 3.6055 0.0011 29 6 1.2910 2.3750 0.0010 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 4.0195 0.3782 -0.0005 34 1 5.8859 3.3363 0.7405 35 1 5.6956 3.8287 -1.5891 36 1 7.7546 0.9867 0.4401 37 1 5.7981 0.5271 1.8112 38 1 2.4512 6.0375 -0.8896 39 1 2.4518 6.0379 0.8904 40 1 2.3885 8.5806 -0.0009 41 1 5.0658 11.0810 -1.5014 42 1 3.9634 9.8180 -2.2020 43 1 0.8974 15.1874 -2.1082 44 1 3.0220 16.4312 -2.1039 45 1 5.1194 15.2842 -1.5142 46 1 5.0929 12.8938 -0.9258 47 1 2.6955 10.6951 1.3030 48 1 4.1724 11.6983 0.9695 49 1 1.3298 4.5113 0.0018 50 1 0.2124 2.3185 0.0010 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:26 Heat of formation + Delta-G solvation = -57.013203 kcal Electronic energy + Delta-G solvation = -34517.053554 eV Core-core repulsion = 29696.782488 eV Total energy + Delta-G solvation = -4820.271066 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.127 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -41.92453 -41.54941 -40.59494 -39.86958 -38.87749 -38.06787 -37.42566 -36.93374 -34.77054 -32.82919 -32.01114 -31.68366 -30.96695 -29.39858 -27.96877 -26.76327 -26.60052 -26.17915 -24.04560 -23.60330 -22.63862 -22.42275 -21.89387 -20.23762 -19.54495 -18.85844 -18.58645 -18.24340 -18.00282 -17.50611 -17.44941 -17.05069 -16.62470 -16.60793 -16.37817 -16.11065 -15.74229 -15.65906 -15.44993 -15.31298 -15.13774 -14.84178 -14.78142 -14.57495 -14.37940 -14.19459 -14.10212 -13.62951 -13.53686 -13.46000 -13.35533 -13.05325 -12.97853 -12.71020 -12.53821 -12.48346 -12.30854 -12.17904 -12.03683 -11.79579 -11.54553 -11.45715 -11.31508 -11.29897 -11.24260 -11.03175 -10.22176 -10.10585 -9.85167 -9.59854 -8.83220 -4.93833 0.05595 0.16562 0.27110 0.32356 1.15113 1.33094 1.38051 1.40313 1.57749 1.91002 2.34124 2.52520 2.55050 2.61312 3.37922 3.43542 3.53056 3.57638 3.63132 3.72592 3.83768 3.85028 3.92455 3.92692 4.05408 4.08401 4.09009 4.12274 4.15012 4.20580 4.27004 4.37408 4.38485 4.44362 4.44951 4.58990 4.69240 4.70045 4.73397 4.78852 4.79537 4.87496 4.95551 4.96655 4.99154 5.08415 5.11409 5.19882 5.28186 5.37093 5.41134 5.47936 5.55348 5.84986 6.10993 6.37361 6.44343 6.51372 7.06432 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.091 3.909 4 C -0.118 4.118 5 C -0.118 4.118 6 C -0.081 4.081 7 O -0.545 6.545 8 Si 0.811 3.189 9 C 0.089 3.911 10 O -0.315 6.315 11 C 0.037 3.963 12 C 0.517 3.483 13 O -0.567 6.567 14 N -0.694 5.694 15 C 0.118 3.882 16 H 0.088 0.912 17 C -0.139 4.139 18 C -0.075 4.075 19 H 0.108 0.892 20 C -0.070 4.070 21 C -0.049 4.049 22 Cl -0.073 7.073 23 C -0.122 4.122 24 C -0.117 4.117 25 C -0.117 4.117 26 C -0.112 4.112 27 C -0.122 4.122 28 C -0.160 4.160 29 C -0.162 4.162 30 H 0.067 0.933 31 H 0.115 0.885 32 H 0.066 0.934 33 H 0.153 0.847 34 H 0.062 0.938 35 H 0.372 0.628 36 H -0.294 1.294 37 H -0.264 1.264 38 H 0.126 0.874 39 H 0.123 0.877 40 H 0.419 0.581 41 H 0.101 0.899 42 H 0.069 0.931 43 H 0.139 0.861 44 H 0.148 0.852 45 H 0.147 0.853 46 H 0.146 0.854 47 H 0.088 0.912 48 H 0.104 0.896 49 H 0.166 0.834 50 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.167 3.512 -0.036 8.891 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.046 3.954 4 C -0.136 4.136 5 C -0.119 4.119 6 C -0.189 4.189 7 O -0.351 6.351 8 Si 0.712 3.288 9 C 0.045 3.955 10 O -0.229 6.229 11 C -0.041 4.041 12 C 0.303 3.697 13 O -0.445 6.445 14 N -0.348 5.348 15 C 0.013 3.987 16 H 0.107 0.893 17 C -0.178 4.178 18 C -0.093 4.093 19 H 0.126 0.874 20 C -0.071 4.071 21 C -0.076 4.076 22 Cl -0.045 7.045 23 C -0.140 4.140 24 C -0.135 4.135 25 C -0.135 4.135 26 C -0.130 4.130 27 C -0.160 4.160 28 C -0.178 4.178 29 C -0.180 4.180 30 H 0.086 0.914 31 H 0.133 0.867 32 H 0.084 0.916 33 H 0.170 0.830 34 H 0.080 0.920 35 H 0.220 0.780 36 H -0.222 1.222 37 H -0.190 1.190 38 H 0.143 0.857 39 H 0.141 0.859 40 H 0.257 0.743 41 H 0.119 0.881 42 H 0.088 0.912 43 H 0.157 0.843 44 H 0.166 0.834 45 H 0.165 0.835 46 H 0.164 0.836 47 H 0.106 0.894 48 H 0.123 0.877 49 H 0.184 0.816 50 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -6.388 2.208 0.565 6.782 hybrid contribution -1.173 2.065 0.248 2.388 sum -7.561 4.273 0.813 8.723 Atomic orbital electron populations 1.23357 0.76387 1.05631 1.02344 1.86088 1.23383 1.26301 1.88925 1.18977 0.91944 0.85349 0.99169 1.20186 0.92416 0.96797 1.04231 1.19454 0.96024 0.90976 1.05467 1.25515 0.92768 1.12509 0.88067 1.86661 1.74055 1.42111 1.32271 0.92219 0.76246 0.78996 0.81355 1.18798 0.91715 0.84239 1.00792 1.86081 1.35472 1.11890 1.89458 1.22708 0.92627 0.81898 1.06822 1.20491 0.88336 0.85304 0.75522 1.90770 1.16588 1.87264 1.49843 1.45370 1.11061 1.03788 1.74566 1.21828 0.95550 0.83751 0.97574 0.89338 1.23555 0.98478 0.98435 0.97311 1.21696 0.99917 0.90436 0.97258 0.87441 1.19706 0.91702 0.96294 0.99409 1.21028 0.87258 0.93424 1.05863 1.98358 1.32698 1.76233 1.97168 1.21303 1.00132 0.92351 1.00230 1.21439 0.91696 1.01260 0.99153 1.21591 0.99370 0.94815 0.97695 1.21256 0.97581 0.94585 0.99612 1.23365 1.00753 0.96171 0.95676 1.21366 0.92075 1.00006 1.04368 1.21415 1.01587 0.90939 1.04077 0.91438 0.86708 0.91558 0.83035 0.92030 0.77994 1.22156 1.18970 0.85680 0.85948 0.74319 0.88054 0.91250 0.84321 0.83401 0.83503 0.83597 0.89382 0.87717 0.81619 0.82159 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.75 10.50 -93.35 -0.98 -1.73 16 3 C 0.09 0.25 6.69 22.49 0.15 0.40 16 4 C -0.12 -0.54 8.59 22.35 0.19 -0.34 16 5 C -0.12 -0.72 5.28 -19.78 -0.10 -0.83 16 6 C -0.08 -0.67 2.33 71.23 0.17 -0.51 16 7 O -0.54 -5.47 12.65 -148.98 -1.89 -7.36 16 8 Si 0.81 4.43 30.17 68.60 2.07 6.50 16 9 C 0.09 0.32 6.61 22.49 0.15 0.47 16 10 O -0.32 -1.42 8.54 -74.37 -0.64 -2.06 16 11 C 0.04 -0.15 5.22 71.24 0.37 0.22 16 12 C 0.52 0.82 7.91 87.66 0.69 1.51 16 13 O -0.57 -7.28 16.10 16.02 0.26 -7.02 16 14 N -0.69 3.26 5.26 -440.04 -2.32 0.94 16 15 C 0.12 -0.33 4.32 45.52 0.20 -0.14 16 16 H 0.09 0.16 7.46 -2.39 -0.02 0.15 16 17 C -0.14 0.46 7.25 31.12 0.23 0.69 16 18 C -0.07 0.33 3.64 -11.01 -0.04 0.29 16 19 H 0.11 -0.52 6.57 -2.39 -0.02 -0.53 16 20 C -0.07 0.10 5.29 -19.84 -0.10 0.00 16 21 C -0.05 -0.02 6.31 22.32 0.14 0.12 16 22 Cl -0.07 -0.01 27.15 -2.72 -0.07 -0.08 16 23 C -0.12 0.06 9.83 22.29 0.22 0.28 16 24 C -0.12 0.30 10.04 22.26 0.22 0.52 16 25 C -0.12 0.38 10.05 22.27 0.22 0.61 16 26 C -0.11 0.33 8.61 22.27 0.19 0.52 16 27 C -0.12 0.71 7.29 31.12 0.23 0.94 16 28 C -0.16 0.35 9.03 22.35 0.20 0.55 16 29 C -0.16 0.27 9.03 22.35 0.20 0.47 16 30 H 0.07 -0.54 7.66 -2.39 -0.02 -0.55 16 31 H 0.11 -0.96 8.14 -2.39 -0.02 -0.97 16 32 H 0.07 -0.52 7.66 -2.39 -0.02 -0.54 16 33 H 0.15 0.26 5.13 -2.91 -0.01 0.25 16 34 H 0.06 0.66 7.83 -2.38 -0.02 0.64 16 35 H 0.37 2.83 8.56 -74.06 -0.63 2.19 16 36 H -0.29 -3.46 7.11 99.48 0.71 -2.75 16 37 H -0.26 -1.95 7.11 99.48 0.71 -1.24 16 38 H 0.13 -1.29 7.66 -2.39 -0.02 -1.31 16 39 H 0.12 -1.22 7.66 -2.39 -0.02 -1.24 16 40 H 0.42 -4.73 8.70 -92.71 -0.81 -5.54 16 41 H 0.10 -0.42 6.31 -2.38 -0.02 -0.43 16 42 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 43 H 0.14 -0.36 8.06 -2.91 -0.02 -0.38 16 44 H 0.15 -0.96 8.06 -2.91 -0.02 -0.98 16 45 H 0.15 -1.06 8.06 -2.91 -0.02 -1.09 16 46 H 0.15 -0.92 6.66 -2.91 -0.02 -0.94 16 47 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 48 H 0.10 -0.66 7.73 -2.38 -0.02 -0.68 16 49 H 0.17 -1.60 6.29 -2.91 -0.02 -1.62 16 50 H 0.16 -1.19 6.29 -2.91 -0.02 -1.20 16 Total: 0.00 -24.27 424.51 0.69 -23.58 By element: Atomic # 1 Polarization: -19.18 SS G_CDS: -0.39 Total: -19.56 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: 4.64 Total: 6.79 kcal Atomic # 7 Polarization: 3.26 SS G_CDS: -2.32 Total: 0.94 kcal Atomic # 8 Polarization: -14.92 SS G_CDS: -3.24 Total: -18.16 kcal Atomic # 14 Polarization: 4.43 SS G_CDS: 2.07 Total: 6.50 kcal Atomic # 17 Polarization: -0.01 SS G_CDS: -0.07 Total: -0.08 kcal Total: -24.27 0.69 -23.58 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.437 kcal (2) G-P(sol) polarization free energy of solvation -24.265 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.703 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.689 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.576 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.013 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds