Wall clock time and date at job start Sat Mar 6 2021 13:16:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.35997 * 117.00533 * 2 1 4 4 C 1.39150 * 120.08068 * 180.02562 * 3 2 1 5 5 O 1.35997 * 120.06802 * 359.95896 * 4 3 2 6 6 C 1.42897 * 116.99662 * 179.97438 * 5 4 3 7 7 C 1.50701 * 109.47137 * 180.02562 * 6 5 4 8 8 O 1.21286 * 120.00016 * 359.97438 * 7 6 5 9 9 N 1.34780 * 120.00113 * 179.97438 * 7 6 5 10 10 C 1.46503 * 120.00076 * 179.97438 * 9 7 6 11 11 H 1.09001 * 112.84360 * 23.80305 * 10 9 7 12 12 C 1.53773 * 113.61314 * 155.00239 * 10 9 7 13 13 C 1.53782 * 87.08252 * 89.11898 * 12 10 9 14 14 H 1.09002 * 113.61022 * 270.87761 * 13 12 10 15 15 C 1.50701 * 113.61427 * 140.06653 * 13 12 10 16 16 C 1.38332 * 120.00590 * 120.00176 * 15 13 12 17 17 Cl 1.73602 * 120.01445 * 359.97438 * 16 15 13 18 18 C 1.38374 * 119.97163 * 179.97438 * 16 15 13 19 19 C 1.38195 * 119.98887 * 359.97438 * 18 16 15 20 20 C 1.38265 * 120.01155 * 0.02604 * 19 18 16 21 21 C 1.38223 * 120.02570 * 359.70066 * 20 19 18 22 22 C 1.53779 * 113.61396 * 252.50210 * 10 9 7 23 23 C 1.38558 * 119.85597 * 179.97438 * 4 3 2 24 24 C 1.38241 * 120.00008 * 359.75095 * 23 4 3 25 25 C 1.38259 * 120.14653 * 0.50643 * 24 23 4 26 26 C 1.50699 * 119.92736 * 179.76826 * 25 24 23 27 27 O 1.42892 * 109.47249 * 119.72467 * 26 25 24 28 28 Si 1.86298 * 109.47032 * 359.71853 * 26 25 24 29 29 C 1.38242 * 120.14200 * 359.49077 * 25 24 23 30 30 H 1.09004 * 109.46864 * 179.97438 * 1 2 3 31 31 H 1.08994 * 109.47438 * 299.99969 * 1 2 3 32 32 H 1.09000 * 109.47102 * 59.99854 * 1 2 3 33 33 H 1.09004 * 109.47389 * 300.00010 * 6 5 4 34 34 H 1.09003 * 109.47261 * 59.99666 * 6 5 4 35 35 H 0.97002 * 119.99952 * 0.02562 * 9 7 6 36 36 H 1.09001 * 113.61747 * 203.66805 * 12 10 9 37 37 H 1.09001 * 113.61702 * 334.48138 * 12 10 9 38 38 H 1.07999 * 120.00625 * 179.97438 * 18 16 15 39 39 H 1.07993 * 119.99796 * 180.02562 * 19 18 16 40 40 H 1.07998 * 119.98755 * 180.02562 * 20 19 18 41 41 H 1.07999 * 119.99605 * 180.29351 * 21 20 19 42 42 H 1.09000 * 113.61744 * 25.42666 * 22 10 9 43 43 H 1.08998 * 113.61566 * 156.33819 * 22 10 9 44 44 H 1.08002 * 119.99992 * 179.97438 * 23 4 3 45 45 H 1.08000 * 119.92937 * 180.24438 * 24 23 4 46 46 H 1.09004 * 109.46453 * 239.72536 * 26 25 24 47 47 H 0.96703 * 114.00176 * 299.99748 * 27 26 25 48 48 H 1.48506 * 109.99834 * 58.68765 * 28 26 25 49 49 H 1.48502 * 110.00011 * 180.02562 * 28 26 25 50 50 H 1.08007 * 119.99802 * 180.27729 * 29 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1476 -0.0002 6 6 5.6002 0.3006 -0.0014 7 6 6.2518 -1.0582 -0.0015 8 8 5.5669 -2.0592 -0.0002 9 7 7.5957 -1.1612 -0.0030 10 6 8.2291 -2.4822 -0.0025 11 1 7.5829 -3.2616 -0.4064 12 6 9.6462 -2.4861 -0.5997 13 6 10.1593 -2.1808 0.8175 14 1 10.2157 -1.1155 1.0413 15 6 11.4220 -2.9215 1.1750 16 6 12.5666 -2.2184 1.5054 17 17 12.5490 -0.4825 1.5077 18 6 13.7255 -2.8993 1.8340 19 6 13.7388 -4.2812 1.8325 20 6 12.5944 -4.9834 1.5022 21 6 11.4349 -4.3038 1.1793 22 6 8.8791 -2.8532 1.3409 23 6 4.0603 2.5233 -0.0011 24 6 3.3029 3.6798 -0.0063 25 6 1.9223 3.6057 -0.0004 26 6 1.1016 4.8696 -0.0008 27 8 0.2771 4.9018 -1.1675 28 14 2.2365 6.3470 -0.0013 29 6 1.2932 2.3748 0.0001 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 -0.3633 0.5139 -0.8900 33 1 5.9059 0.8498 -0.8920 34 1 5.9072 0.8512 0.8879 35 1 8.1435 -0.3607 -0.0037 36 1 9.9585 -3.4599 -0.9767 37 1 9.8220 -1.6802 -1.3122 38 1 14.6195 -2.3509 2.0917 39 1 14.6431 -4.8127 2.0894 40 1 12.6051 -6.0633 1.5015 41 1 10.5401 -4.8529 0.9260 42 1 8.4361 -2.3428 2.1960 43 1 8.9817 -3.9275 1.4944 44 1 5.1386 2.5839 -0.0011 45 1 3.7907 4.6433 -0.0107 46 1 0.4729 4.8947 0.8893 47 1 0.7709 4.8820 -1.9987 48 1 3.1211 6.3075 -1.1935 49 1 1.4393 7.5999 -0.0011 50 1 0.2145 2.3196 0.0002 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:39 Heat of formation + Delta-G solvation = -54.643703 kcal Electronic energy + Delta-G solvation = -34224.206801 eV Core-core repulsion = 29404.038484 eV Total energy + Delta-G solvation = -4820.168317 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.127 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -41.88428 -41.57267 -40.51227 -39.46472 -38.94865 -38.58935 -37.44782 -36.99549 -34.69974 -32.23265 -31.83994 -31.76941 -31.42525 -29.54123 -28.42657 -26.86463 -26.41341 -26.05403 -23.97555 -23.56779 -22.77799 -22.50062 -21.81206 -20.28890 -19.78818 -18.63333 -18.54348 -18.19784 -17.88328 -17.52318 -17.24687 -16.98680 -16.64734 -16.61162 -16.44928 -16.15506 -15.88511 -15.79963 -15.58556 -15.43154 -15.14140 -14.93450 -14.83912 -14.74904 -14.46727 -14.25980 -13.76433 -13.72320 -13.56987 -13.50877 -13.34924 -13.07845 -12.78197 -12.61878 -12.54932 -12.53229 -12.26200 -12.18868 -12.14779 -12.00364 -11.85650 -11.66252 -11.59312 -11.36527 -10.88568 -10.64216 -10.19525 -9.92397 -9.78104 -9.66171 -8.85614 -4.98699 0.09790 0.17419 0.19299 0.29807 1.12600 1.25676 1.41232 1.48587 1.57166 1.93860 2.32058 2.51077 2.53112 2.56699 3.28854 3.32722 3.42917 3.48397 3.55966 3.61984 3.72970 3.76459 3.79184 3.82263 3.92371 3.94168 3.95503 4.02585 4.12408 4.25858 4.26056 4.28392 4.29434 4.34520 4.52685 4.52986 4.57362 4.58485 4.61980 4.65469 4.71940 4.78397 4.85783 4.89945 4.99964 5.00027 5.10160 5.19116 5.31041 5.36594 5.38487 5.48373 5.55699 5.73862 5.96387 6.31439 6.37436 6.54790 7.09984 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.276 6.276 6 C 0.038 3.962 7 C 0.519 3.481 8 O -0.506 6.506 9 N -0.711 5.711 10 C 0.123 3.877 11 H 0.109 0.891 12 C -0.133 4.133 13 C -0.081 4.081 14 H 0.106 0.894 15 C -0.062 4.062 16 C -0.033 4.033 17 Cl -0.069 7.069 18 C -0.108 4.108 19 C -0.111 4.111 20 C -0.111 4.111 21 C -0.106 4.106 22 C -0.142 4.142 23 C -0.169 4.169 24 C -0.113 4.113 25 C -0.114 4.114 26 C -0.072 4.072 27 O -0.530 6.530 28 Si 0.686 3.314 29 C -0.146 4.146 30 H 0.103 0.897 31 H 0.056 0.944 32 H 0.056 0.944 33 H 0.095 0.905 34 H 0.096 0.904 35 H 0.403 0.597 36 H 0.100 0.900 37 H 0.079 0.921 38 H 0.133 0.867 39 H 0.132 0.868 40 H 0.130 0.870 41 H 0.133 0.867 42 H 0.077 0.923 43 H 0.097 0.903 44 H 0.139 0.861 45 H 0.133 0.867 46 H 0.119 0.881 47 H 0.376 0.624 48 H -0.260 1.260 49 H -0.257 1.257 50 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.609 1.200 1.131 4.895 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.304 3.696 8 O -0.379 6.379 9 N -0.365 5.365 10 C 0.017 3.983 11 H 0.127 0.873 12 C -0.171 4.171 13 C -0.100 4.100 14 H 0.124 0.876 15 C -0.063 4.063 16 C -0.060 4.060 17 Cl -0.040 7.040 18 C -0.127 4.127 19 C -0.129 4.129 20 C -0.129 4.129 21 C -0.124 4.124 22 C -0.181 4.181 23 C -0.188 4.188 24 C -0.131 4.131 25 C -0.114 4.114 26 C -0.182 4.182 27 O -0.337 6.337 28 Si 0.587 3.413 29 C -0.165 4.165 30 H 0.121 0.879 31 H 0.075 0.925 32 H 0.075 0.925 33 H 0.112 0.888 34 H 0.114 0.886 35 H 0.237 0.763 36 H 0.118 0.882 37 H 0.098 0.902 38 H 0.151 0.849 39 H 0.150 0.850 40 H 0.148 0.852 41 H 0.151 0.849 42 H 0.096 0.904 43 H 0.115 0.885 44 H 0.157 0.843 45 H 0.150 0.850 46 H 0.136 0.864 47 H 0.224 0.776 48 H -0.184 1.184 49 H -0.182 1.182 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 3.860 0.957 1.148 4.139 hybrid contribution 0.076 0.459 -1.002 1.105 sum 3.936 1.416 0.145 4.185 Atomic orbital electron populations 1.23130 0.78114 1.04409 1.01367 1.86248 1.21336 1.25342 1.88539 1.18279 0.89009 0.85563 1.01028 1.18280 0.88305 0.85765 1.01781 1.86278 1.16007 1.27744 1.88850 1.22474 0.81322 0.96194 1.04060 1.20020 0.82334 0.90592 0.76690 1.90801 1.62542 1.37992 1.46584 1.45479 1.05823 1.08966 1.76253 1.21839 0.93833 0.85504 0.97085 0.87327 1.23414 0.94022 1.03783 0.95856 1.21744 0.90974 1.00194 0.97046 0.87643 1.19546 0.93782 0.93612 0.99342 1.20856 0.95605 0.84558 1.04953 1.98369 1.98519 1.09983 1.97088 1.21107 0.97055 0.94645 0.99909 1.21178 0.98946 0.93327 0.99468 1.21301 0.92725 1.00580 0.98321 1.21023 0.98775 0.92768 0.99857 1.23574 0.94679 1.01880 0.97957 1.20989 1.00469 0.90669 1.06696 1.20689 0.92846 0.97894 1.01648 1.19986 0.93707 0.95094 1.02637 1.25008 1.00225 1.01801 0.91189 1.86593 1.35608 1.95714 1.15748 0.94994 0.80384 0.76399 0.89534 1.20938 1.00408 0.90395 1.04791 0.87863 0.92506 0.92540 0.88768 0.88640 0.76262 0.88153 0.90228 0.84871 0.84990 0.85200 0.84899 0.90427 0.88450 0.84292 0.85005 0.86365 0.77603 1.18443 1.18230 0.84161 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.32 10.28 -34.23 -0.35 -1.67 16 3 C 0.11 0.36 6.70 -39.12 -0.26 0.09 16 4 C 0.10 0.28 6.70 -39.12 -0.26 0.01 16 5 O -0.28 -1.06 9.45 -47.36 -0.45 -1.51 16 6 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 7 C 0.52 0.78 7.91 -10.98 -0.09 0.70 16 8 O -0.51 -3.39 16.10 -14.36 -0.23 -3.62 16 9 N -0.71 1.21 5.26 -53.02 -0.28 0.93 16 10 C 0.12 -0.15 4.32 -67.12 -0.29 -0.44 16 11 H 0.11 0.06 7.46 -51.93 -0.39 -0.33 16 12 C -0.13 0.33 7.29 -25.92 -0.19 0.14 16 13 C -0.08 0.15 3.64 -90.96 -0.33 -0.18 16 14 H 0.11 -0.20 6.57 -51.93 -0.34 -0.55 16 15 C -0.06 0.03 5.29 -104.59 -0.55 -0.52 16 16 C -0.03 -0.01 6.31 -39.50 -0.25 -0.26 16 17 Cl -0.07 -0.01 27.16 -51.86 -1.41 -1.42 16 18 C -0.11 0.02 9.83 -39.55 -0.39 -0.37 16 19 C -0.11 0.11 10.05 -39.59 -0.40 -0.29 16 20 C -0.11 0.14 10.05 -39.58 -0.40 -0.26 16 21 C -0.11 0.12 8.63 -39.59 -0.34 -0.22 16 22 C -0.14 0.21 7.26 -25.92 -0.19 0.03 16 23 C -0.17 0.05 9.04 -39.46 -0.36 -0.30 16 24 C -0.11 0.07 8.66 -39.57 -0.34 -0.27 16 25 C -0.11 -0.04 5.39 -104.61 -0.56 -0.60 16 26 C -0.07 0.03 2.82 36.01 0.10 0.13 16 27 O -0.53 -0.56 12.77 -35.23 -0.45 -1.01 16 28 Si 0.69 -0.90 29.78 -169.99 -5.06 -5.96 16 29 C -0.15 -0.22 8.60 -39.46 -0.34 -0.56 16 30 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.06 -0.05 7.66 -51.93 -0.40 -0.45 16 32 H 0.06 -0.03 7.66 -51.93 -0.40 -0.43 16 33 H 0.09 -0.32 7.67 -51.93 -0.40 -0.72 16 34 H 0.10 -0.34 7.66 -51.93 -0.40 -0.74 16 35 H 0.40 -1.87 8.70 -40.82 -0.36 -2.22 16 36 H 0.10 -0.27 7.73 -51.93 -0.40 -0.67 16 37 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 38 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 39 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 40 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 41 H 0.13 -0.37 6.65 -52.49 -0.35 -0.72 16 42 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.10 -0.19 6.31 -51.93 -0.33 -0.52 16 44 H 0.14 -0.48 6.30 -52.49 -0.33 -0.81 16 45 H 0.13 -0.36 4.87 -52.49 -0.26 -0.62 16 46 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 47 H 0.38 -0.62 8.70 45.56 0.40 -0.22 16 48 H -0.26 -0.13 7.11 56.52 0.40 0.27 16 49 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 50 H 0.14 0.08 6.30 -52.48 -0.33 -0.25 16 LS Contribution 425.33 15.07 6.41 6.41 Total: 0.00 -10.88 425.33 -12.50 -23.38 By element: Atomic # 1 Polarization: -7.09 SS G_CDS: -6.42 Total: -13.51 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: -4.26 Total: -2.01 kcal Atomic # 7 Polarization: 1.21 SS G_CDS: -0.28 Total: 0.93 kcal Atomic # 8 Polarization: -6.33 SS G_CDS: -1.48 Total: -7.81 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.06 Total: -5.96 kcal Atomic # 17 Polarization: -0.01 SS G_CDS: -1.41 Total: -1.42 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -10.88 -12.50 -23.38 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.266 kcal (2) G-P(sol) polarization free energy of solvation -10.876 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.142 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.501 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.377 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds