Wall clock time and date at job start Sat Mar 6 2021 13:16:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86300 * 109.47237 * 2 1 4 4 C 1.50700 * 109.47370 * 120.00135 * 2 1 3 5 5 C 1.38246 * 119.93596 * 64.99887 * 4 2 1 6 6 C 1.38245 * 120.03872 * 179.97438 * 5 4 2 7 7 Br 1.89099 * 120.03362 * 180.02562 * 6 5 4 8 8 C 1.38786 * 119.93155 * 359.97438 * 6 5 4 9 9 O 1.35909 * 120.06284 * 179.97438 * 8 6 5 10 10 C 1.42903 * 117.00562 * 179.97438 * 9 8 6 11 11 C 1.50697 * 109.47187 * 179.97438 * 10 9 8 12 12 O 1.21282 * 120.00155 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99687 * 179.97438 * 11 10 9 14 14 C 1.46498 * 119.99912 * 179.97438 * 13 11 10 15 15 H 1.09001 * 112.84921 * 23.81245 * 14 13 11 16 16 C 1.53783 * 113.61375 * 155.00352 * 14 13 11 17 17 C 1.53780 * 87.07828 * 89.12024 * 16 14 13 18 18 H 1.09000 * 113.61292 * 270.79835 * 17 16 14 19 19 C 1.50701 * 113.61099 * 139.98333 * 17 16 14 20 20 C 1.38338 * 120.00609 * 119.72924 * 19 17 16 21 21 Cl 1.73603 * 120.01093 * 359.96791 * 20 19 17 22 22 C 1.38370 * 119.97119 * 179.69698 * 20 19 17 23 23 C 1.38193 * 119.98714 * 0.54845 * 22 20 19 24 24 C 1.38259 * 120.01551 * 359.74915 * 23 22 20 25 25 C 1.38217 * 120.02339 * 359.97124 * 24 23 22 26 26 C 1.53773 * 113.61839 * 252.50296 * 14 13 11 27 27 C 1.38726 * 119.88335 * 359.97438 * 8 6 5 28 28 C 1.38154 * 119.94817 * 0.02562 * 27 8 6 29 29 H 0.96702 * 113.99692 * 300.00021 * 1 2 3 30 30 H 1.09006 * 109.46618 * 240.00021 * 2 1 3 31 31 H 1.48504 * 110.00035 * 300.00081 * 3 2 1 32 32 H 1.48492 * 110.00098 * 61.32151 * 3 2 1 33 33 H 1.07993 * 119.98296 * 0.25168 * 5 4 2 34 34 H 1.08997 * 109.46583 * 299.99837 * 10 9 8 35 35 H 1.09000 * 109.46676 * 59.99994 * 10 9 8 36 36 H 0.96996 * 120.00307 * 0.02562 * 13 11 10 37 37 H 1.09003 * 113.61440 * 203.66725 * 16 14 13 38 38 H 1.08998 * 113.61605 * 334.48949 * 16 14 13 39 39 H 1.08006 * 120.00838 * 180.26608 * 22 20 19 40 40 H 1.08002 * 119.99355 * 179.76697 * 23 22 20 41 41 H 1.07999 * 119.99058 * 180.02562 * 24 23 22 42 42 H 1.08005 * 119.99301 * 180.02562 * 25 24 23 43 43 H 1.09005 * 113.61549 * 25.43451 * 26 14 13 44 44 H 1.09004 * 113.61850 * 156.33563 * 26 14 13 45 45 H 1.07995 * 120.02442 * 179.97438 * 27 8 6 46 46 H 1.08006 * 119.95848 * 179.97438 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6840 -2.0603 1.3970 6 6 2.1443 -2.7143 2.5246 7 35 1.8065 -4.5609 2.7520 8 6 2.8556 -2.0143 3.4892 9 8 3.3089 -2.6544 4.5990 10 6 4.0340 -1.8711 5.5493 11 6 4.4528 -2.7436 6.7044 12 8 4.1598 -3.9205 6.7129 13 7 5.1540 -2.2163 7.7275 14 6 5.5608 -3.0643 8.8507 15 1 5.6198 -4.1196 8.5846 16 6 6.8026 -2.5464 9.5954 17 6 5.8380 -1.7421 10.4828 18 1 5.6123 -0.7492 10.0941 19 6 6.2282 -1.7260 11.9383 20 6 6.4999 -0.5248 12.5685 21 17 6.3922 0.9643 11.6826 22 6 6.8520 -0.5103 13.9065 23 6 6.9431 -1.6965 14.6097 24 6 6.6775 -2.8972 13.9778 25 6 6.3201 -2.9119 12.6427 26 6 4.7711 -2.7961 10.1427 27 6 3.1030 -0.6600 3.3184 28 6 2.6407 -0.0114 2.1896 29 1 -0.3933 0.4417 0.7651 30 1 1.7922 -0.5139 -0.8901 31 1 1.5615 2.4679 -1.2085 32 1 1.5880 2.4585 1.2242 33 1 1.1347 -2.6053 0.6436 34 1 4.9187 -1.4492 5.0726 35 1 3.3987 -1.0645 5.9153 36 1 5.3887 -1.2751 7.7205 37 1 7.3451 -3.3240 10.1332 38 1 7.4531 -1.9248 8.9802 39 1 7.0601 0.4275 14.4002 40 1 7.2216 -1.6856 15.6531 41 1 6.7484 -3.8239 14.5278 42 1 6.1123 -3.8501 12.1497 43 1 3.7808 -2.3749 9.9697 44 1 4.7582 -3.6419 10.8301 45 1 3.6559 -0.1130 4.0677 46 1 2.8329 1.0431 2.0567 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:43 Heat of formation + Delta-G solvation = -16.555255 kcal Electronic energy + Delta-G solvation = -31815.201782 eV Core-core repulsion = 27131.086913 eV Total energy + Delta-G solvation = -4684.114870 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 452.022 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -41.90794 -41.48251 -40.44795 -39.40505 -38.68047 -37.47250 -37.34872 -34.76388 -33.60267 -32.17232 -31.90601 -31.79161 -30.47522 -29.63209 -26.89978 -26.59785 -26.14670 -24.23955 -23.78132 -22.80814 -22.46117 -21.91489 -20.33319 -19.67522 -18.71074 -18.46995 -18.11201 -17.61766 -17.29663 -17.08956 -16.74687 -16.49464 -16.40461 -16.15289 -15.79538 -15.73624 -15.33297 -15.23483 -14.92658 -14.89074 -14.82205 -14.51184 -14.45864 -14.04231 -13.84005 -13.65823 -13.62201 -13.44847 -13.10703 -12.80619 -12.55785 -12.44565 -12.31398 -12.28492 -12.27099 -11.89619 -11.81931 -11.75544 -11.62237 -11.40035 -11.07546 -10.96818 -10.65480 -10.25065 -9.98299 -9.94691 -9.68471 -9.35132 -5.05427 -0.09999 0.05826 0.07614 0.17168 0.71774 1.10206 1.20286 1.27292 1.40618 1.48980 1.89021 2.32431 2.36717 2.50924 3.24828 3.28205 3.32051 3.45206 3.48742 3.52315 3.58078 3.64532 3.70183 3.77073 3.78503 3.82652 3.93081 3.99722 4.01617 4.23684 4.26115 4.27176 4.46465 4.49587 4.55356 4.55523 4.59663 4.67834 4.74785 4.76330 4.83033 4.86433 4.90313 4.96049 5.15818 5.16962 5.27366 5.36203 5.38902 5.45230 5.71743 5.95187 6.25819 6.33605 7.02225 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.070 4.070 3 Si 0.686 3.314 4 C -0.150 4.150 5 C -0.023 4.023 6 C -0.123 4.123 7 Br -0.025 7.025 8 C 0.161 3.839 9 O -0.273 6.273 10 C 0.037 3.963 11 C 0.519 3.481 12 O -0.504 6.504 13 N -0.711 5.711 14 C 0.123 3.877 15 H 0.109 0.891 16 C -0.133 4.133 17 C -0.081 4.081 18 H 0.105 0.895 19 C -0.062 4.062 20 C -0.033 4.033 21 Cl -0.069 7.069 22 C -0.108 4.108 23 C -0.111 4.111 24 C -0.111 4.111 25 C -0.106 4.106 26 C -0.142 4.142 27 C -0.201 4.201 28 C -0.062 4.062 29 H 0.376 0.624 30 H 0.121 0.879 31 H -0.255 1.255 32 H -0.260 1.260 33 H 0.144 0.856 34 H 0.099 0.901 35 H 0.097 0.903 36 H 0.403 0.597 37 H 0.100 0.900 38 H 0.079 0.921 39 H 0.133 0.867 40 H 0.132 0.868 41 H 0.130 0.870 42 H 0.133 0.867 43 H 0.077 0.923 44 H 0.098 0.902 45 H 0.141 0.859 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.752 4.455 2.949 7.150 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.180 4.180 3 Si 0.587 3.413 4 C -0.152 4.152 5 C -0.043 4.043 6 C -0.203 4.203 7 Br 0.061 6.939 8 C 0.113 3.887 9 O -0.185 6.185 10 C -0.042 4.042 11 C 0.303 3.697 12 O -0.376 6.376 13 N -0.364 5.364 14 C 0.018 3.982 15 H 0.127 0.873 16 C -0.171 4.171 17 C -0.099 4.099 18 H 0.123 0.877 19 C -0.063 4.063 20 C -0.060 4.060 21 Cl -0.040 7.040 22 C -0.127 4.127 23 C -0.129 4.129 24 C -0.129 4.129 25 C -0.124 4.124 26 C -0.181 4.181 27 C -0.220 4.220 28 C -0.080 4.080 29 H 0.224 0.776 30 H 0.138 0.862 31 H -0.180 1.180 32 H -0.185 1.185 33 H 0.162 0.838 34 H 0.117 0.883 35 H 0.115 0.885 36 H 0.237 0.763 37 H 0.119 0.881 38 H 0.098 0.902 39 H 0.151 0.849 40 H 0.150 0.850 41 H 0.148 0.852 42 H 0.151 0.849 43 H 0.095 0.905 44 H 0.116 0.884 45 H 0.158 0.842 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 4.246 3.323 2.444 5.919 hybrid contribution -0.770 1.196 0.676 1.575 sum 3.476 4.518 3.120 6.499 Atomic orbital electron populations 1.86625 1.17578 1.79905 1.49322 1.24991 0.84050 1.10907 0.98081 0.95067 0.91520 0.74327 0.80392 1.20199 1.02523 0.94314 0.98126 1.20892 0.95172 0.93593 0.94657 1.21160 1.07907 0.93163 0.98082 1.96814 1.94724 1.04764 1.97603 1.18640 0.92998 0.90698 0.86391 1.86285 1.67903 1.36091 1.28197 1.22548 0.97985 0.94117 0.89543 1.19942 0.78462 0.88476 0.82802 1.90814 1.52708 1.16015 1.78087 1.45466 1.57055 1.13350 1.20571 1.21848 0.95049 0.96314 0.85032 0.87268 1.23417 0.96021 1.00138 0.97477 1.21742 0.97410 1.00116 0.90680 0.87662 1.19544 0.99474 0.91507 0.95792 1.20856 1.05034 0.87014 0.93072 1.98369 1.96694 1.33117 1.75807 1.21109 0.99752 0.99569 0.92280 1.21180 0.99548 0.91798 1.00371 1.21301 0.98314 0.98528 0.94766 1.21020 0.99630 0.97416 0.94357 1.23575 0.98447 0.99025 0.97050 1.21168 1.06908 0.92826 1.01101 1.20979 0.94840 0.99742 0.92412 0.77595 0.86164 1.18000 1.18453 0.83825 0.88306 0.88474 0.76255 0.88113 0.90198 0.84864 0.84976 0.85184 0.84899 0.90467 0.88416 0.84158 0.84587 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.32 12.83 -35.23 -0.45 -0.77 16 2 C -0.07 0.08 2.80 36.01 0.10 0.18 16 3 Si 0.69 -1.40 29.88 -169.99 -5.08 -6.48 16 4 C -0.15 0.09 5.35 -104.61 -0.56 -0.47 16 5 C -0.02 -0.02 9.42 -39.58 -0.37 -0.39 16 6 C -0.12 -0.27 6.24 -39.38 -0.25 -0.52 16 7 Br -0.02 -0.09 33.16 -68.01 -2.26 -2.34 16 8 C 0.16 0.20 6.68 -39.20 -0.26 -0.06 16 9 O -0.27 -0.59 9.00 -39.36 -0.35 -0.94 16 10 C 0.04 -0.07 5.22 36.00 0.19 0.12 16 11 C 0.52 0.28 7.91 -10.99 -0.09 0.19 16 12 O -0.50 -2.83 16.10 -14.35 -0.23 -3.06 16 13 N -0.71 1.71 5.26 -53.02 -0.28 1.43 16 14 C 0.12 -0.21 4.32 -67.12 -0.29 -0.50 16 15 H 0.11 0.00 7.46 -51.93 -0.39 -0.39 16 16 C -0.13 0.38 7.29 -25.92 -0.19 0.20 16 17 C -0.08 0.17 3.64 -90.96 -0.33 -0.16 16 18 H 0.11 -0.24 6.58 -51.93 -0.34 -0.58 16 19 C -0.06 0.05 5.29 -104.59 -0.55 -0.51 16 20 C -0.03 0.00 6.31 -39.50 -0.25 -0.25 16 21 Cl -0.07 0.00 27.16 -51.86 -1.41 -1.41 16 22 C -0.11 0.04 9.83 -39.55 -0.39 -0.35 16 23 C -0.11 0.13 10.05 -39.59 -0.40 -0.27 16 24 C -0.11 0.16 10.05 -39.58 -0.40 -0.24 16 25 C -0.11 0.14 8.61 -39.59 -0.34 -0.20 16 26 C -0.14 0.27 7.25 -25.92 -0.19 0.08 16 27 C -0.20 0.30 9.04 -39.43 -0.36 -0.06 16 28 C -0.06 0.11 8.66 -39.60 -0.34 -0.24 16 29 H 0.38 -0.83 8.70 45.56 0.40 -0.43 16 30 H 0.12 -0.21 7.96 -51.93 -0.41 -0.63 16 31 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 32 H -0.26 0.11 7.01 56.52 0.40 0.51 16 33 H 0.14 0.07 8.06 -52.49 -0.42 -0.35 16 34 H 0.10 -0.47 7.66 -51.93 -0.40 -0.87 16 35 H 0.10 -0.44 7.66 -51.93 -0.40 -0.84 16 36 H 0.40 -2.13 8.70 -40.82 -0.36 -2.49 16 37 H 0.10 -0.31 7.72 -51.93 -0.40 -0.71 16 38 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 39 H 0.13 -0.20 8.06 -52.48 -0.42 -0.62 16 40 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 41 H 0.13 -0.41 8.06 -52.49 -0.42 -0.83 16 42 H 0.13 -0.40 6.66 -52.48 -0.35 -0.75 16 43 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 44 H 0.10 -0.22 6.31 -51.93 -0.33 -0.55 16 45 H 0.14 -0.64 6.30 -52.49 -0.33 -0.97 16 46 H 0.14 -0.52 4.83 -52.48 -0.25 -0.77 16 LS Contribution 416.53 15.07 6.28 6.28 Total: 0.00 -9.66 416.53 -14.34 -24.01 By element: Atomic # 1 Polarization: -7.96 SS G_CDS: -5.30 Total: -13.26 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -5.26 Total: -3.45 kcal Atomic # 7 Polarization: 1.71 SS G_CDS: -0.28 Total: 1.43 kcal Atomic # 8 Polarization: -3.73 SS G_CDS: -1.04 Total: -4.77 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.08 Total: -6.48 kcal Atomic # 17 Polarization: 0.00 SS G_CDS: -1.41 Total: -1.41 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -2.26 Total: -2.34 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -9.66 -14.34 -24.01 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.453 kcal (2) G-P(sol) polarization free energy of solvation -9.664 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.211 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.345 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.008 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.555 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds