Wall clock time and date at job start Sat Mar 6 2021 13:16:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86300 * 109.47237 * 2 1 4 4 C 1.50700 * 109.47370 * 120.00135 * 2 1 3 5 5 C 1.38246 * 119.93596 * 64.99887 * 4 2 1 6 6 C 1.38245 * 120.03872 * 179.97438 * 5 4 2 7 7 Br 1.89099 * 120.03362 * 180.02562 * 6 5 4 8 8 C 1.38786 * 119.93155 * 359.97438 * 6 5 4 9 9 O 1.35909 * 120.06284 * 179.97438 * 8 6 5 10 10 C 1.42903 * 117.00562 * 179.97438 * 9 8 6 11 11 C 1.50697 * 109.47187 * 179.97438 * 10 9 8 12 12 O 1.21282 * 120.00155 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99687 * 179.97438 * 11 10 9 14 14 C 1.46498 * 119.99912 * 179.97438 * 13 11 10 15 15 H 1.09001 * 112.84921 * 23.81245 * 14 13 11 16 16 C 1.53783 * 113.61375 * 155.00352 * 14 13 11 17 17 C 1.53780 * 87.07828 * 89.12024 * 16 14 13 18 18 H 1.09000 * 113.61292 * 270.79835 * 17 16 14 19 19 C 1.50701 * 113.61099 * 139.98333 * 17 16 14 20 20 C 1.38338 * 120.00609 * 119.72924 * 19 17 16 21 21 Cl 1.73603 * 120.01093 * 359.96791 * 20 19 17 22 22 C 1.38370 * 119.97119 * 179.69698 * 20 19 17 23 23 C 1.38193 * 119.98714 * 0.54845 * 22 20 19 24 24 C 1.38259 * 120.01551 * 359.74915 * 23 22 20 25 25 C 1.38217 * 120.02339 * 359.97124 * 24 23 22 26 26 C 1.53773 * 113.61839 * 252.50296 * 14 13 11 27 27 C 1.38726 * 119.88335 * 359.97438 * 8 6 5 28 28 C 1.38154 * 119.94817 * 0.02562 * 27 8 6 29 29 H 0.96702 * 113.99692 * 300.00021 * 1 2 3 30 30 H 1.09006 * 109.46618 * 240.00021 * 2 1 3 31 31 H 1.48504 * 110.00035 * 300.00081 * 3 2 1 32 32 H 1.48492 * 110.00098 * 61.32151 * 3 2 1 33 33 H 1.07993 * 119.98296 * 0.25168 * 5 4 2 34 34 H 1.08997 * 109.46583 * 299.99837 * 10 9 8 35 35 H 1.09000 * 109.46676 * 59.99994 * 10 9 8 36 36 H 0.96996 * 120.00307 * 0.02562 * 13 11 10 37 37 H 1.09003 * 113.61440 * 203.66725 * 16 14 13 38 38 H 1.08998 * 113.61605 * 334.48949 * 16 14 13 39 39 H 1.08006 * 120.00838 * 180.26608 * 22 20 19 40 40 H 1.08002 * 119.99355 * 179.76697 * 23 22 20 41 41 H 1.07999 * 119.99058 * 180.02562 * 24 23 22 42 42 H 1.08005 * 119.99301 * 180.02562 * 25 24 23 43 43 H 1.09005 * 113.61549 * 25.43451 * 26 14 13 44 44 H 1.09004 * 113.61850 * 156.33563 * 26 14 13 45 45 H 1.07995 * 120.02442 * 179.97438 * 27 8 6 46 46 H 1.08006 * 119.95848 * 179.97438 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6840 -2.0603 1.3970 6 6 2.1443 -2.7143 2.5246 7 35 1.8065 -4.5609 2.7520 8 6 2.8556 -2.0143 3.4892 9 8 3.3089 -2.6544 4.5990 10 6 4.0340 -1.8711 5.5493 11 6 4.4528 -2.7436 6.7044 12 8 4.1598 -3.9205 6.7129 13 7 5.1540 -2.2163 7.7275 14 6 5.5608 -3.0643 8.8507 15 1 5.6198 -4.1196 8.5846 16 6 6.8026 -2.5464 9.5954 17 6 5.8380 -1.7421 10.4828 18 1 5.6123 -0.7492 10.0941 19 6 6.2282 -1.7260 11.9383 20 6 6.4999 -0.5248 12.5685 21 17 6.3922 0.9643 11.6826 22 6 6.8520 -0.5103 13.9065 23 6 6.9431 -1.6965 14.6097 24 6 6.6775 -2.8972 13.9778 25 6 6.3201 -2.9119 12.6427 26 6 4.7711 -2.7961 10.1427 27 6 3.1030 -0.6600 3.3184 28 6 2.6407 -0.0114 2.1896 29 1 -0.3933 0.4417 0.7651 30 1 1.7922 -0.5139 -0.8901 31 1 1.5615 2.4679 -1.2085 32 1 1.5880 2.4585 1.2242 33 1 1.1347 -2.6053 0.6436 34 1 4.9187 -1.4492 5.0726 35 1 3.3987 -1.0645 5.9153 36 1 5.3887 -1.2751 7.7205 37 1 7.3451 -3.3240 10.1332 38 1 7.4531 -1.9248 8.9802 39 1 7.0601 0.4275 14.4002 40 1 7.2216 -1.6856 15.6531 41 1 6.7484 -3.8239 14.5278 42 1 6.1123 -3.8501 12.1497 43 1 3.7808 -2.3749 9.9697 44 1 4.7582 -3.6419 10.8301 45 1 3.6559 -0.1130 4.0677 46 1 2.8329 1.0431 2.0567 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:41 Heat of formation + Delta-G solvation = -13.157346 kcal Electronic energy + Delta-G solvation = -31815.054438 eV Core-core repulsion = 27131.086913 eV Total energy + Delta-G solvation = -4683.967525 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 452.022 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -41.83649 -41.39163 -40.40304 -39.32670 -38.65184 -37.40520 -37.32583 -34.73388 -33.60862 -32.08270 -31.81598 -31.66641 -30.50216 -29.53172 -26.73192 -26.51294 -26.02066 -24.15802 -23.67332 -22.70201 -22.39752 -21.85528 -20.21070 -19.58725 -18.63224 -18.40739 -18.02724 -17.51081 -17.23936 -16.99112 -16.66158 -16.37308 -16.32085 -16.09619 -15.71960 -15.69781 -15.28502 -15.13234 -14.81352 -14.76774 -14.71757 -14.48994 -14.40130 -13.95304 -13.80525 -13.60826 -13.48962 -13.36026 -12.96469 -12.68669 -12.47320 -12.41063 -12.21529 -12.19206 -12.15454 -11.89076 -11.76700 -11.70077 -11.51942 -11.26623 -11.23585 -11.01983 -10.60301 -10.17942 -9.97046 -9.83388 -9.57886 -9.33588 -4.89435 -0.05666 0.11640 0.18338 0.28857 0.64100 1.17048 1.33131 1.39071 1.43337 1.61462 2.00874 2.38719 2.48628 2.63067 3.40618 3.41167 3.45867 3.59693 3.60770 3.66152 3.75383 3.81616 3.86409 3.95029 4.02467 4.08766 4.10991 4.11585 4.17359 4.32508 4.39368 4.40221 4.57771 4.62497 4.64891 4.72301 4.75939 4.82518 4.85004 4.90506 4.98143 5.00087 5.01368 5.11647 5.23262 5.29880 5.40029 5.47995 5.49756 5.58564 5.86632 6.05713 6.43030 6.50354 7.12120 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.084 4.084 3 Si 0.777 3.223 4 C -0.149 4.149 5 C -0.034 4.034 6 C -0.144 4.144 7 Br -0.054 7.054 8 C 0.149 3.851 9 O -0.305 6.305 10 C 0.032 3.968 11 C 0.515 3.485 12 O -0.566 6.566 13 N -0.694 5.694 14 C 0.119 3.881 15 H 0.088 0.912 16 C -0.121 4.121 17 C -0.075 4.075 18 H 0.108 0.892 19 C -0.070 4.070 20 C -0.049 4.049 21 Cl -0.073 7.073 22 C -0.122 4.122 23 C -0.118 4.118 24 C -0.117 4.117 25 C -0.113 4.113 26 C -0.141 4.141 27 C -0.189 4.189 28 C -0.056 4.056 29 H 0.387 0.613 30 H 0.123 0.877 31 H -0.308 1.308 32 H -0.271 1.271 33 H 0.137 0.863 34 H 0.135 0.865 35 H 0.130 0.870 36 H 0.420 0.580 37 H 0.104 0.896 38 H 0.089 0.911 39 H 0.139 0.861 40 H 0.148 0.852 41 H 0.147 0.853 42 H 0.146 0.854 43 H 0.068 0.932 44 H 0.100 0.900 45 H 0.179 0.821 46 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.021 6.613 3.649 9.659 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.192 4.192 3 Si 0.681 3.319 4 C -0.151 4.151 5 C -0.054 4.054 6 C -0.224 4.224 7 Br 0.031 6.969 8 C 0.101 3.899 9 O -0.217 6.217 10 C -0.046 4.046 11 C 0.302 3.698 12 O -0.443 6.443 13 N -0.348 5.348 14 C 0.013 3.987 15 H 0.106 0.894 16 C -0.159 4.159 17 C -0.093 4.093 18 H 0.126 0.874 19 C -0.071 4.071 20 C -0.075 4.075 21 Cl -0.044 7.044 22 C -0.140 4.140 23 C -0.136 4.136 24 C -0.135 4.135 25 C -0.131 4.131 26 C -0.179 4.179 27 C -0.208 4.208 28 C -0.074 4.074 29 H 0.236 0.764 30 H 0.140 0.860 31 H -0.237 1.237 32 H -0.197 1.197 33 H 0.155 0.845 34 H 0.152 0.848 35 H 0.147 0.853 36 H 0.258 0.742 37 H 0.122 0.878 38 H 0.108 0.892 39 H 0.157 0.843 40 H 0.166 0.834 41 H 0.164 0.836 42 H 0.164 0.836 43 H 0.087 0.913 44 H 0.118 0.882 45 H 0.196 0.804 46 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 5.541 5.506 3.178 8.433 hybrid contribution -1.177 0.569 0.469 1.389 sum 4.364 6.075 3.647 8.322 Atomic orbital electron populations 1.86595 1.18667 1.80437 1.50190 1.25316 0.83385 1.12374 0.98147 0.94089 0.89896 0.71127 0.76742 1.20279 1.02545 0.93619 0.98608 1.20893 0.95708 0.94440 0.94393 1.21277 1.09751 0.91925 0.99469 1.96762 1.94969 1.07477 1.97719 1.18807 0.93245 0.91741 0.86081 1.86245 1.68590 1.37899 1.28959 1.22857 0.99738 0.93633 0.88324 1.20496 0.77725 0.87985 0.83618 1.90791 1.55345 1.18699 1.79477 1.45351 1.55744 1.14091 1.19584 1.21812 0.96044 0.95567 0.85234 0.89371 1.23361 0.95510 1.00042 0.96970 1.21700 0.97300 1.00123 0.90176 0.87354 1.19714 0.99473 0.91478 0.96410 1.21025 1.05902 0.87171 0.93440 1.98358 1.96770 1.33372 1.75888 1.21302 1.00079 1.00250 0.92405 1.21436 0.99304 0.91655 1.01197 1.21586 0.97778 0.99201 0.94943 1.21254 0.99368 0.97820 0.94610 1.23561 0.98065 0.99279 0.97000 1.21558 1.06011 0.91557 1.01714 1.21289 0.93586 1.00847 0.91654 0.76412 0.85964 1.23663 1.19667 0.84541 0.84792 0.85280 0.74223 0.87794 0.89200 0.84333 0.83449 0.83553 0.83619 0.91343 0.88160 0.80391 0.81917 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.78 12.83 -148.98 -1.91 -2.69 16 2 C -0.08 0.22 2.80 71.24 0.20 0.42 16 3 Si 0.78 -4.24 29.88 68.60 2.05 -2.19 16 4 C -0.15 0.29 5.35 -19.85 -0.11 0.18 16 5 C -0.03 -0.09 9.42 22.27 0.21 0.12 16 6 C -0.14 -0.79 6.24 22.40 0.14 -0.65 16 7 Br -0.05 -0.52 33.16 -20.37 -0.68 -1.19 16 8 C 0.15 0.30 6.68 22.52 0.15 0.45 16 9 O -0.30 -1.31 9.00 -73.49 -0.66 -1.98 16 10 C 0.03 -0.17 5.22 71.23 0.37 0.20 16 11 C 0.52 0.58 7.91 87.66 0.69 1.27 16 12 O -0.57 -7.42 16.10 16.00 0.26 -7.16 16 13 N -0.69 3.75 5.26 -440.05 -2.32 1.44 16 14 C 0.12 -0.38 4.32 45.52 0.20 -0.19 16 15 H 0.09 0.14 7.46 -2.39 -0.02 0.12 16 16 C -0.12 0.78 7.29 31.12 0.23 1.00 16 17 C -0.07 0.36 3.64 -11.02 -0.04 0.32 16 18 H 0.11 -0.59 6.58 -2.39 -0.02 -0.60 16 19 C -0.07 0.12 5.29 -19.84 -0.10 0.02 16 20 C -0.05 -0.01 6.31 22.33 0.14 0.13 16 21 Cl -0.07 0.02 27.16 -2.72 -0.07 -0.05 16 22 C -0.12 0.09 9.83 22.29 0.22 0.31 16 23 C -0.12 0.32 10.05 22.26 0.22 0.54 16 24 C -0.12 0.40 10.05 22.27 0.22 0.62 16 25 C -0.11 0.35 8.61 22.26 0.19 0.54 16 26 C -0.14 0.50 7.25 31.12 0.23 0.72 16 27 C -0.19 1.07 9.04 22.37 0.20 1.27 16 28 C -0.06 0.33 8.66 22.26 0.19 0.53 16 29 H 0.39 -1.73 8.70 -74.06 -0.64 -2.38 16 30 H 0.12 -0.42 7.96 -2.38 -0.02 -0.44 16 31 H -0.31 -1.09 7.11 99.48 0.71 -0.38 16 32 H -0.27 0.94 7.01 99.48 0.70 1.64 16 33 H 0.14 0.41 8.06 -2.91 -0.02 0.38 16 34 H 0.13 -1.71 7.66 -2.39 -0.02 -1.73 16 35 H 0.13 -1.56 7.66 -2.39 -0.02 -1.58 16 36 H 0.42 -5.21 8.70 -92.71 -0.81 -6.02 16 37 H 0.10 -0.70 7.72 -2.39 -0.02 -0.72 16 38 H 0.09 -0.73 8.14 -2.39 -0.02 -0.74 16 39 H 0.14 -0.39 8.06 -2.91 -0.02 -0.41 16 40 H 0.15 -0.97 8.06 -2.91 -0.02 -0.99 16 41 H 0.15 -1.07 8.06 -2.91 -0.02 -1.09 16 42 H 0.15 -0.93 6.66 -2.91 -0.02 -0.95 16 43 H 0.07 -0.11 8.14 -2.38 -0.02 -0.13 16 44 H 0.10 -0.42 6.31 -2.38 -0.02 -0.43 16 45 H 0.18 -2.46 6.30 -2.91 -0.02 -2.48 16 46 H 0.16 -1.86 4.83 -2.91 -0.01 -1.88 16 Total: 0.00 -26.70 416.53 -0.13 -26.83 By element: Atomic # 1 Polarization: -20.46 SS G_CDS: -0.35 Total: -20.82 kcal Atomic # 6 Polarization: 4.26 SS G_CDS: 3.56 Total: 7.82 kcal Atomic # 7 Polarization: 3.75 SS G_CDS: -2.32 Total: 1.44 kcal Atomic # 8 Polarization: -9.52 SS G_CDS: -2.32 Total: -11.83 kcal Atomic # 14 Polarization: -4.24 SS G_CDS: 2.05 Total: -2.19 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -0.07 Total: -0.05 kcal Atomic # 35 Polarization: -0.52 SS G_CDS: -0.68 Total: -1.19 kcal Total: -26.70 -0.13 -26.83 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.674 kcal (2) G-P(sol) polarization free energy of solvation -26.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.028 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.129 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.832 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.157 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds