Wall clock time and date at job start Sat Mar 6 2021 13:16:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86299 * 109.47425 * 2 1 4 4 C 1.50695 * 109.47207 * 120.00471 * 2 1 3 5 5 C 1.35450 * 125.56328 * 245.01961 * 4 2 1 6 6 C 1.39839 * 107.86462 * 179.97438 * 5 4 2 7 7 C 1.37866 * 107.08578 * 0.02562 * 6 5 4 8 8 C 1.46675 * 126.23312 * 180.02562 * 7 6 5 9 9 O 1.21701 * 120.00181 * 0.02562 * 8 7 6 10 10 N 1.34776 * 120.00061 * 180.02562 * 8 7 6 11 11 C 1.46502 * 119.99991 * 179.97438 * 10 8 7 12 12 H 1.08995 * 112.85160 * 23.81162 * 11 10 8 13 13 C 1.53787 * 113.61254 * 155.00358 * 11 10 8 14 14 C 1.53778 * 87.08050 * 89.11768 * 13 11 10 15 15 H 1.09000 * 113.61521 * 270.79586 * 14 13 11 16 16 C 1.50707 * 113.61377 * 139.98143 * 14 13 11 17 17 C 1.38325 * 120.00613 * 119.97526 * 16 14 13 18 18 Cl 1.73598 * 120.01483 * 0.04901 * 17 16 14 19 19 C 1.38378 * 119.97237 * 180.02562 * 17 16 14 20 20 C 1.38184 * 119.98682 * 0.02562 * 19 17 16 21 21 C 1.38269 * 120.01333 * 359.74544 * 20 19 17 22 22 C 1.38215 * 120.02528 * 0.51246 * 21 20 19 23 23 C 1.53778 * 113.61702 * 252.49879 * 11 10 8 24 24 N 1.35536 * 125.56588 * 65.28853 * 4 2 1 25 25 H 0.96704 * 113.99488 * 299.99890 * 1 2 3 26 26 H 1.09007 * 109.46862 * 240.00269 * 2 1 3 27 27 H 1.48499 * 110.00120 * 300.00299 * 3 2 1 28 28 H 1.48503 * 109.99853 * 61.32167 * 3 2 1 29 29 H 1.08005 * 126.07101 * 359.97438 * 5 4 2 30 30 H 1.08009 * 126.45745 * 180.02562 * 6 5 4 31 31 H 0.97006 * 120.00352 * 0.02562 * 10 8 7 32 32 H 1.08997 * 113.61485 * 334.57072 * 13 11 10 33 33 H 1.09005 * 113.69203 * 203.67932 * 13 11 10 34 34 H 1.08003 * 120.00662 * 179.97438 * 19 17 16 35 35 H 1.08000 * 119.99667 * 179.97438 * 20 19 17 36 36 H 1.07997 * 119.98427 * 180.27375 * 21 20 19 37 37 H 1.08002 * 119.99636 * 179.76953 * 22 21 20 38 38 H 1.09005 * 113.61667 * 156.33754 * 23 11 10 39 39 H 1.08996 * 113.61396 * 25.43812 * 23 11 10 40 40 H 0.97003 * 125.67850 * 0.07861 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6326 -0.1394 2.2387 6 6 2.9069 -1.1310 3.1857 7 6 2.3533 -2.3033 2.7168 8 6 2.3935 -3.6088 3.3841 9 8 2.9557 -3.7268 4.4570 10 7 1.8080 -4.6779 2.8091 11 6 1.8487 -5.9820 3.4753 12 1 1.9894 -5.9024 4.5532 13 6 0.6954 -6.9160 3.0720 14 6 1.5998 -7.4111 1.9311 15 1 1.5005 -6.8325 1.0127 16 6 1.5181 -8.8978 1.6978 17 6 1.1065 -9.3837 0.4698 18 17 0.6853 -8.2813 -0.8034 19 6 1.0312 -10.7488 0.2565 20 6 1.3666 -11.6258 1.2703 21 6 1.7825 -11.1395 2.4961 22 6 1.8528 -9.7761 2.7114 23 6 2.7954 -6.9890 2.8012 24 7 1.7595 -2.0263 1.5062 25 1 -0.3933 0.4417 0.7651 26 1 1.7923 -0.5138 -0.8901 27 1 1.5615 2.4679 -1.2084 28 1 1.5880 2.4585 1.2243 29 1 2.9276 0.8977 2.3003 30 1 3.4501 -1.0027 4.1104 31 1 1.3602 -4.5841 1.9537 32 1 -0.1936 -6.3883 2.7268 33 1 0.4713 -7.6814 3.8151 34 1 0.7096 -11.1288 -0.7020 35 1 1.3075 -12.6913 1.1041 36 1 2.0487 -11.8254 3.2867 37 1 2.1741 -9.3968 3.6702 38 1 3.1468 -7.7739 3.4710 39 1 3.6018 -6.5201 2.2374 40 1 1.2945 -2.6661 0.9446 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:50 Heat of formation + Delta-G solvation = 27.787088 kcal Electronic energy + Delta-G solvation = -25140.069635 eV Core-core repulsion = 21334.715637 eV Total energy + Delta-G solvation = -3805.353998 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.092 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.57749 -41.51737 -40.20890 -38.82621 -37.82767 -37.44978 -34.83381 -32.34406 -31.86338 -31.69472 -31.16869 -27.27865 -26.78837 -26.02210 -23.98049 -23.39175 -22.58310 -21.61067 -21.19928 -20.25197 -19.88898 -18.44292 -18.08792 -17.23099 -16.75108 -16.67787 -16.43866 -16.27277 -16.05391 -15.40442 -15.30572 -15.09151 -14.89778 -14.80598 -14.58996 -14.48793 -14.31520 -13.99210 -13.66791 -13.55473 -13.41993 -12.98957 -12.73682 -12.51390 -12.34891 -12.19393 -11.90881 -11.82975 -11.59527 -11.38395 -11.31106 -10.84207 -10.30625 -10.09230 -9.86486 -9.61538 -9.31159 -4.83355 0.15208 0.25898 0.27321 1.13224 1.21857 1.52891 1.69212 1.86097 1.95074 2.19702 2.23525 2.60369 3.33899 3.35204 3.54880 3.57434 3.60701 3.75140 3.82400 3.91269 4.06652 4.13222 4.24255 4.29723 4.36198 4.37350 4.49121 4.57427 4.68391 4.71734 4.76381 4.83208 4.93220 4.95057 4.97618 5.05058 5.10085 5.27189 5.34889 5.46874 5.51395 5.58031 5.77896 5.84266 6.23574 6.39491 6.41098 6.98887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.065 4.065 3 Si 0.796 3.204 4 C 0.033 3.967 5 C -0.205 4.205 6 C -0.115 4.115 7 C -0.064 4.064 8 C 0.592 3.408 9 O -0.566 6.566 10 N -0.701 5.701 11 C 0.117 3.883 12 H 0.096 0.904 13 C -0.122 4.122 14 C -0.076 4.076 15 H 0.102 0.898 16 C -0.071 4.071 17 C -0.050 4.050 18 Cl -0.076 7.076 19 C -0.122 4.122 20 C -0.117 4.117 21 C -0.115 4.115 22 C -0.111 4.111 23 C -0.137 4.137 24 N -0.513 5.513 25 H 0.390 0.610 26 H 0.133 0.867 27 H -0.299 1.299 28 H -0.281 1.281 29 H 0.167 0.833 30 H 0.147 0.853 31 H 0.407 0.593 32 H 0.082 0.918 33 H 0.109 0.891 34 H 0.139 0.861 35 H 0.149 0.851 36 H 0.149 0.851 37 H 0.149 0.851 38 H 0.107 0.893 39 H 0.067 0.933 40 H 0.426 0.574 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.081 -1.912 -1.848 2.660 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.173 4.173 3 Si 0.699 3.301 4 C -0.086 4.086 5 C -0.229 4.229 6 C -0.142 4.142 7 C -0.178 4.178 8 C 0.381 3.619 9 O -0.445 6.445 10 N -0.352 5.352 11 C 0.012 3.988 12 H 0.114 0.886 13 C -0.160 4.160 14 C -0.095 4.095 15 H 0.120 0.880 16 C -0.071 4.071 17 C -0.077 4.077 18 Cl -0.048 7.048 19 C -0.140 4.140 20 C -0.135 4.135 21 C -0.133 4.133 22 C -0.129 4.129 23 C -0.176 4.176 24 N -0.111 5.111 25 H 0.240 0.760 26 H 0.151 0.849 27 H -0.227 1.227 28 H -0.207 1.207 29 H 0.184 0.816 30 H 0.165 0.835 31 H 0.243 0.757 32 H 0.101 0.899 33 H 0.128 0.872 34 H 0.156 0.844 35 H 0.167 0.833 36 H 0.167 0.833 37 H 0.166 0.834 38 H 0.125 0.875 39 H 0.085 0.915 40 H 0.266 0.734 Dipole moment (debyes) X Y Z Total from point charges 0.223 -1.559 -1.814 2.402 hybrid contribution -1.551 -0.471 -0.351 1.659 sum -1.328 -2.030 -2.165 3.251 Atomic orbital electron populations 1.86582 1.18130 1.80546 1.50437 1.25088 0.83614 1.12315 0.96295 0.93274 0.90181 0.70028 0.76642 1.21267 1.03830 0.84070 0.99476 1.20951 1.06026 1.00888 0.94991 1.21497 1.01197 0.90894 1.00619 1.20293 1.10999 0.95394 0.91115 1.17212 0.77828 0.82781 0.84062 1.90846 1.45784 1.85143 1.22745 1.45461 1.56963 1.08140 1.24625 1.21885 0.97742 0.81330 0.97843 0.88579 1.23381 0.96578 0.98384 0.97688 1.21677 0.97803 0.91046 0.98925 0.88011 1.19690 0.99160 0.96256 0.92026 1.21040 1.05102 0.91244 0.90311 1.98358 1.91931 1.63566 1.50902 1.21298 1.00577 0.91071 1.01077 1.21452 0.98338 1.00869 0.92834 1.21606 0.97956 0.95844 0.97912 1.21266 0.99399 0.93013 0.99220 1.23557 0.96414 0.98825 0.98776 1.41919 1.42857 1.09550 1.16730 0.76047 0.84888 1.22703 1.20674 0.81565 0.83505 0.75698 0.89943 0.87237 0.84362 0.83303 0.83293 0.83361 0.87502 0.91464 0.73413 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.87 12.88 -148.98 -1.92 -1.05 16 2 C -0.06 0.29 3.08 71.23 0.22 0.51 16 3 Si 0.80 -3.88 30.56 68.60 2.10 -1.78 16 4 C 0.03 -0.07 6.46 41.34 0.27 0.20 16 5 C -0.20 0.09 9.32 22.01 0.21 0.30 16 6 C -0.12 -0.45 10.65 22.57 0.24 -0.21 16 7 C -0.06 -0.21 7.06 40.35 0.28 0.07 16 8 C 0.59 3.50 7.79 86.45 0.67 4.17 16 9 O -0.57 -7.97 16.48 -4.35 -0.07 -8.04 16 10 N -0.70 0.50 5.26 -443.99 -2.33 -1.83 16 11 C 0.12 -0.12 4.32 45.52 0.20 0.07 16 12 H 0.10 0.23 7.46 -2.39 -0.02 0.21 16 13 C -0.12 0.52 7.29 31.12 0.23 0.75 16 14 C -0.08 0.21 3.64 -11.01 -0.04 0.17 16 15 H 0.10 -0.25 6.57 -2.39 -0.02 -0.27 16 16 C -0.07 0.04 5.29 -19.84 -0.10 -0.07 16 17 C -0.05 -0.08 6.31 22.32 0.14 0.07 16 18 Cl -0.08 -0.13 27.16 -2.72 -0.07 -0.20 16 19 C -0.12 -0.02 9.83 22.29 0.22 0.20 16 20 C -0.12 0.26 10.05 22.26 0.22 0.49 16 21 C -0.12 0.37 10.05 22.27 0.22 0.59 16 22 C -0.11 0.29 8.61 22.26 0.19 0.49 16 23 C -0.14 0.29 7.25 31.12 0.23 0.52 16 24 N -0.51 1.13 5.99 -171.94 -1.03 0.10 16 25 H 0.39 -2.43 8.70 -74.05 -0.64 -3.07 16 26 H 0.13 -0.94 7.96 -2.38 -0.02 -0.96 16 27 H -0.30 -0.78 7.11 99.48 0.71 -0.07 16 28 H -0.28 0.13 7.11 99.48 0.71 0.84 16 29 H 0.17 -0.74 6.19 -2.91 -0.02 -0.76 16 30 H 0.15 0.65 8.06 -2.91 -0.02 0.62 16 31 H 0.41 -2.35 7.83 -92.70 -0.73 -3.08 16 32 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 33 H 0.11 -0.61 7.72 -2.38 -0.02 -0.63 16 34 H 0.14 -0.25 8.06 -2.91 -0.02 -0.28 16 35 H 0.15 -0.94 8.06 -2.91 -0.02 -0.97 16 36 H 0.15 -1.11 8.06 -2.91 -0.02 -1.13 16 37 H 0.15 -0.95 6.66 -2.91 -0.02 -0.96 16 38 H 0.11 -0.42 6.31 -2.38 -0.02 -0.44 16 39 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 40 H 0.43 -2.95 8.19 -92.71 -0.76 -3.71 16 Total: 0.00 -18.66 351.66 -0.91 -19.57 By element: Atomic # 1 Polarization: -14.09 SS G_CDS: -0.97 Total: -15.06 kcal Atomic # 6 Polarization: 4.91 SS G_CDS: 3.39 Total: 8.31 kcal Atomic # 7 Polarization: 1.63 SS G_CDS: -3.37 Total: -1.74 kcal Atomic # 8 Polarization: -7.10 SS G_CDS: -1.99 Total: -9.09 kcal Atomic # 14 Polarization: -3.88 SS G_CDS: 2.10 Total: -1.78 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -0.07 Total: -0.20 kcal Total: -18.66 -0.91 -19.57 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.354 kcal (2) G-P(sol) polarization free energy of solvation -18.656 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.698 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.911 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.567 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.787 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds