Wall clock time and date at job start Sat Mar 6 2021 13:16:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35964 * 117.00148 * 2 1 4 4 C 1.39448 * 120.12323 * 179.97438 * 3 2 1 5 5 O 1.34778 * 133.24105 * 0.02562 * 4 3 2 6 6 C 1.34934 * 110.83938 * 179.97438 * 5 4 3 7 7 C 1.46982 * 125.13704 * 179.97438 * 6 5 4 8 8 O 1.21656 * 120.00039 * 180.02562 * 7 6 5 9 9 N 1.34781 * 120.00345 * 0.03169 * 7 6 5 10 10 C 1.46498 * 120.00175 * 179.97438 * 9 7 6 11 11 H 1.09004 * 112.84954 * 23.80378 * 10 9 7 12 12 C 1.53777 * 113.61331 * 154.99506 * 10 9 7 13 13 C 1.53777 * 87.07935 * 89.11703 * 12 10 9 14 14 H 1.09004 * 113.61643 * 270.79911 * 13 12 10 15 15 C 1.50707 * 113.61525 * 139.98148 * 13 12 10 16 16 C 1.38325 * 120.00820 * 121.52675 * 15 13 12 17 17 Cl 1.73602 * 120.01311 * 359.95838 * 16 15 13 18 18 C 1.38373 * 119.97339 * 179.97438 * 16 15 13 19 19 C 1.38185 * 119.98904 * 0.02562 * 18 16 15 20 20 C 1.38265 * 120.01320 * 359.97200 * 19 18 16 21 21 C 1.38225 * 120.02460 * 0.02562 * 20 19 18 22 22 C 1.53774 * 87.17451 * 25.39160 * 13 12 10 23 23 C 1.35811 * 109.71976 * 0.24761 * 6 5 4 24 24 C 1.40608 * 119.13764 * 179.97438 * 4 3 2 25 25 C 1.39779 * 120.12059 * 0.02562 * 24 4 3 26 26 C 1.50702 * 120.09676 * 180.02562 * 25 24 4 27 27 O 1.42898 * 109.46997 * 74.99759 * 26 25 24 28 28 Si 1.86297 * 109.47225 * 194.99930 * 26 25 24 29 29 C 1.36632 * 119.81106 * 359.97438 * 25 24 4 30 30 C 1.38268 * 120.12094 * 0.02562 * 3 2 1 31 31 H 1.08993 * 109.46763 * 180.02562 * 1 2 3 32 32 H 1.08999 * 109.46972 * 300.00815 * 1 2 3 33 33 H 1.08995 * 109.46757 * 60.00442 * 1 2 3 34 34 H 0.97000 * 119.99366 * 359.97438 * 9 7 6 35 35 H 1.09003 * 113.62018 * 334.56887 * 12 10 9 36 36 H 1.09003 * 113.69224 * 203.67915 * 12 10 9 37 37 H 1.08001 * 120.00753 * 179.97438 * 18 16 15 38 38 H 1.07995 * 119.99800 * 179.97438 * 19 18 16 39 39 H 1.07994 * 119.98950 * 179.74823 * 20 19 18 40 40 H 1.08002 * 119.99215 * 179.97438 * 21 20 19 41 41 H 1.08997 * 113.61704 * 89.15808 * 22 13 12 42 42 H 1.09002 * 113.61659 * 220.06094 * 22 13 12 43 43 H 1.07998 * 126.95260 * 179.76151 * 23 6 5 44 44 H 1.08995 * 109.46869 * 314.99902 * 26 25 24 45 45 H 0.96702 * 114.00256 * 60.00279 * 27 26 25 46 46 H 1.48496 * 110.00263 * 179.97438 * 28 26 25 47 47 H 1.48497 * 110.00065 * 301.31855 * 28 26 25 48 48 H 1.07999 * 119.75406 * 179.97438 * 29 25 24 49 49 H 1.08004 * 119.65719 * 359.97438 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2874 0.0005 5 8 4.4142 0.3573 0.0007 6 6 5.6318 0.9387 0.0007 7 6 6.9131 0.2185 0.0014 8 8 7.9596 0.8389 0.0018 9 7 6.9287 -1.1292 0.0014 10 6 8.2058 -1.8470 0.0015 11 1 9.0251 -1.2532 0.4070 12 6 8.1171 -3.2620 0.5971 13 6 7.7806 -3.7526 -0.8209 14 1 6.7140 -3.7409 -1.0454 15 6 8.4398 -5.0594 -1.1799 16 6 7.6667 -6.1475 -1.5429 17 17 5.9368 -6.0086 -1.5840 18 6 8.2728 -7.3469 -1.8729 19 6 9.6498 -7.4572 -1.8392 20 6 10.4221 -6.3692 -1.4764 21 6 9.8173 -5.1708 -1.1467 22 6 8.5338 -2.5184 -1.3445 23 6 5.4945 2.2898 0.0061 24 6 4.0555 2.5510 0.0000 25 6 3.2766 3.7117 -0.0006 26 6 3.9382 5.0657 -0.0017 27 8 4.4602 5.3396 -1.3035 28 14 2.6866 6.3688 0.4524 29 6 1.9137 3.6151 -0.0011 30 6 1.2958 2.3727 0.0005 31 1 -0.3632 -1.0276 0.0005 32 1 -0.3633 0.5140 0.8899 33 1 -0.3633 0.5138 -0.8900 34 1 6.0943 -1.6238 0.0013 35 1 7.2998 -3.3863 1.3076 36 1 9.0676 -3.6384 0.9753 37 1 7.6697 -8.1969 -2.1559 38 1 10.1230 -8.3933 -2.0963 39 1 11.4981 -6.4570 -1.4462 40 1 10.4210 -4.3215 -0.8629 41 1 9.5991 -2.6900 -1.4987 42 1 8.0526 -2.0432 -2.1993 43 1 6.2875 3.0230 0.0111 44 1 4.7508 5.0736 0.7246 45 1 3.7912 5.3484 -2.0017 46 1 3.3267 7.7087 0.4553 47 1 1.5578 6.3468 -0.5122 48 1 1.3128 4.5125 -0.0011 49 1 0.2174 2.3120 0.0005 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:53 Heat of formation + Delta-G solvation = -10.319616 kcal Electronic energy + Delta-G solvation = -35984.641211 eV Core-core repulsion = 31065.480269 eV Total energy + Delta-G solvation = -4919.160942 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.111 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -43.79632 -41.70735 -40.78990 -40.31299 -39.14918 -38.91141 -37.43694 -37.13205 -34.86791 -33.69179 -32.12915 -31.79097 -31.67893 -30.91166 -28.59848 -26.79055 -26.71687 -26.23694 -25.01938 -24.03801 -23.68976 -22.64516 -22.13491 -21.81061 -20.27536 -19.90962 -19.10408 -18.60888 -18.24636 -17.89829 -17.78940 -17.28855 -17.01813 -16.71091 -16.63472 -16.41133 -16.22552 -15.91099 -15.85922 -15.80877 -15.18307 -14.95496 -14.78720 -14.73906 -14.60242 -14.58407 -14.45347 -14.22031 -13.61423 -13.51351 -13.44702 -13.43094 -13.27930 -12.99293 -12.73517 -12.50857 -12.49599 -12.28620 -12.19273 -12.14015 -11.85555 -11.72947 -11.67229 -11.49980 -11.31754 -11.05506 -10.61894 -10.37052 -9.87663 -9.84114 -9.60305 -9.03943 -4.89339 -0.71232 0.06881 0.16608 0.27574 0.57456 1.13701 1.15163 1.29704 1.59168 1.81659 1.83352 1.97570 2.11071 2.36489 2.61699 3.12380 3.33921 3.36800 3.52926 3.55925 3.59353 3.63356 3.78200 3.82598 3.84374 3.91347 3.94758 4.07899 4.13884 4.14721 4.30396 4.37311 4.38467 4.39811 4.41759 4.47727 4.54922 4.69359 4.72569 4.73852 4.74989 4.80391 4.82547 4.84262 4.94043 4.98481 5.01913 5.02885 5.18589 5.26408 5.28969 5.36261 5.47666 5.50964 5.56378 5.85790 6.13554 6.25248 6.49121 6.75248 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.334 6.334 3 C 0.137 3.863 4 C 0.021 3.979 5 O -0.182 6.182 6 C -0.035 4.035 7 C 0.606 3.394 8 O -0.541 6.541 9 N -0.689 5.689 10 C 0.114 3.886 11 H 0.106 0.894 12 C -0.121 4.121 13 C -0.080 4.080 14 H 0.098 0.902 15 C -0.070 4.070 16 C -0.052 4.052 17 Cl -0.079 7.079 18 C -0.121 4.121 19 C -0.117 4.117 20 C -0.115 4.115 21 C -0.110 4.110 22 C -0.137 4.137 23 C -0.110 4.110 24 C -0.096 4.096 25 C -0.099 4.099 26 C -0.090 4.090 27 O -0.548 6.548 28 Si 0.782 3.218 29 C -0.089 4.089 30 C -0.165 4.165 31 H 0.114 0.886 32 H 0.078 0.922 33 H 0.073 0.927 34 H 0.415 0.585 35 H 0.082 0.918 36 H 0.116 0.884 37 H 0.138 0.862 38 H 0.150 0.850 39 H 0.151 0.849 40 H 0.151 0.849 41 H 0.112 0.888 42 H 0.065 0.935 43 H 0.173 0.827 44 H 0.116 0.884 45 H 0.386 0.614 46 H -0.304 1.304 47 H -0.262 1.262 48 H 0.166 0.834 49 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.726 -2.015 2.260 5.613 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.248 6.248 3 C 0.091 3.909 4 C -0.027 4.027 5 O -0.084 6.084 6 C -0.085 4.085 7 C 0.392 3.608 8 O -0.420 6.420 9 N -0.339 5.339 10 C 0.009 3.991 11 H 0.124 0.876 12 C -0.158 4.158 13 C -0.098 4.098 14 H 0.116 0.884 15 C -0.071 4.071 16 C -0.078 4.078 17 Cl -0.050 7.050 18 C -0.140 4.140 19 C -0.135 4.135 20 C -0.132 4.132 21 C -0.128 4.128 22 C -0.175 4.175 23 C -0.130 4.130 24 C -0.097 4.097 25 C -0.100 4.100 26 C -0.197 4.197 27 O -0.356 6.356 28 Si 0.685 3.315 29 C -0.106 4.106 30 C -0.183 4.183 31 H 0.132 0.868 32 H 0.096 0.904 33 H 0.092 0.908 34 H 0.252 0.748 35 H 0.101 0.899 36 H 0.134 0.866 37 H 0.156 0.844 38 H 0.167 0.833 39 H 0.168 0.832 40 H 0.169 0.831 41 H 0.130 0.870 42 H 0.084 0.916 43 H 0.191 0.809 44 H 0.134 0.866 45 H 0.236 0.764 46 H -0.233 1.233 47 H -0.188 1.188 48 H 0.183 0.817 49 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges -3.965 -1.368 2.339 4.802 hybrid contribution -0.486 -0.526 -1.422 1.592 sum -4.451 -1.894 0.917 4.924 Atomic orbital electron populations 1.23483 0.75327 1.05971 1.03199 1.86149 1.24314 1.25882 1.88445 1.17999 0.86121 0.86851 0.99975 1.19224 0.88238 0.87140 1.08094 1.84019 1.12759 1.35122 1.76531 1.21922 0.83978 0.92759 1.09839 1.16629 0.85062 0.82598 0.76482 1.90891 1.31272 1.68134 1.51679 1.45563 1.10659 1.04890 1.72747 1.22062 0.85793 0.93136 0.98065 0.87638 1.23387 1.04504 0.92468 0.95480 1.21692 1.00098 0.90479 0.97551 0.88432 1.19677 0.93884 0.94046 0.99459 1.21064 0.84324 0.96451 1.05974 1.98364 1.11419 1.98043 1.97153 1.21289 0.96016 0.96403 1.00297 1.21451 0.92595 1.00349 0.99060 1.21612 1.01647 0.92519 0.97464 1.21268 0.92887 0.99114 0.99494 1.23598 1.02267 0.94726 0.96920 1.22862 0.95412 0.94346 1.00427 1.19576 0.92321 0.92767 1.05022 1.19560 0.93457 0.93882 1.03093 1.25392 1.07775 0.98598 0.87949 1.86607 1.38954 1.92796 1.17233 0.93878 0.75400 0.73463 0.88744 1.20889 0.92936 0.98810 0.97972 1.21375 1.01801 0.89576 1.05580 0.86751 0.90377 0.90823 0.74829 0.89936 0.86603 0.84406 0.83254 0.83168 0.83141 0.86964 0.91638 0.80927 0.86647 0.76448 1.23251 1.18821 0.81692 0.80302 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -1.06 10.50 -93.15 -0.98 -2.04 16 3 C 0.14 0.49 6.70 22.57 0.15 0.64 16 4 C 0.02 0.17 7.35 23.14 0.17 0.34 16 5 O -0.18 -1.66 10.28 -13.49 -0.14 -1.80 16 6 C -0.03 -0.31 7.07 24.00 0.17 -0.14 16 7 C 0.61 5.30 7.80 86.53 0.67 5.98 16 8 O -0.54 -7.72 16.42 -4.21 -0.07 -7.79 16 9 N -0.69 -2.11 5.26 -443.44 -2.33 -4.44 16 10 C 0.11 0.04 4.33 45.57 0.20 0.24 16 11 H 0.11 0.22 7.46 -2.39 -0.02 0.21 16 12 C -0.12 0.34 7.29 31.12 0.23 0.57 16 13 C -0.08 0.05 3.65 -11.01 -0.04 0.01 16 14 H 0.10 0.10 6.55 -2.38 -0.02 0.09 16 15 C -0.07 -0.06 5.29 -19.84 -0.11 -0.16 16 16 C -0.05 -0.16 6.31 22.32 0.14 -0.02 16 17 Cl -0.08 -0.32 27.15 -2.72 -0.07 -0.39 16 18 C -0.12 -0.15 9.83 22.29 0.22 0.07 16 19 C -0.12 0.19 10.05 22.26 0.22 0.41 16 20 C -0.11 0.31 10.05 22.27 0.22 0.54 16 21 C -0.11 0.22 8.54 22.27 0.19 0.41 16 22 C -0.14 0.09 7.27 31.18 0.23 0.31 16 23 C -0.11 -0.93 10.68 23.79 0.25 -0.67 16 24 C -0.10 -0.63 6.16 -20.24 -0.12 -0.76 16 25 C -0.10 -0.15 5.26 -19.87 -0.10 -0.25 16 26 C -0.09 -0.03 2.70 71.24 0.19 0.16 16 27 O -0.55 -2.07 12.88 -148.98 -1.92 -3.99 16 28 Si 0.78 -2.93 30.25 68.60 2.08 -0.85 16 29 C -0.09 0.27 8.62 22.02 0.19 0.45 16 30 C -0.16 0.46 9.03 22.40 0.20 0.66 16 31 H 0.11 -0.97 8.14 -2.39 -0.02 -0.99 16 32 H 0.08 -0.76 7.66 -2.39 -0.02 -0.78 16 33 H 0.07 -0.67 7.66 -2.39 -0.02 -0.69 16 34 H 0.41 0.29 8.42 -92.71 -0.78 -0.49 16 35 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 36 H 0.12 -0.61 7.64 -2.39 -0.02 -0.63 16 37 H 0.14 -0.11 8.06 -2.91 -0.02 -0.13 16 38 H 0.15 -0.87 8.06 -2.91 -0.02 -0.89 16 39 H 0.15 -1.08 8.06 -2.91 -0.02 -1.10 16 40 H 0.15 -0.94 6.73 -2.91 -0.02 -0.96 16 41 H 0.11 -0.38 6.40 -2.39 -0.02 -0.40 16 42 H 0.06 0.14 8.14 -2.39 -0.02 0.13 16 43 H 0.17 1.32 8.06 -2.91 -0.02 1.29 16 44 H 0.12 0.04 7.96 -2.39 -0.02 0.02 16 45 H 0.39 -1.01 8.70 -74.06 -0.64 -1.65 16 46 H -0.30 -1.42 7.11 99.48 0.71 -0.71 16 47 H -0.26 0.77 6.69 99.48 0.67 1.43 16 48 H 0.17 -1.37 4.81 -2.91 -0.01 -1.38 16 49 H 0.18 -1.75 6.26 -2.91 -0.02 -1.77 16 Total: 0.00 -21.73 423.22 0.58 -21.15 By element: Atomic # 1 Polarization: -9.28 SS G_CDS: -0.38 Total: -9.66 kcal Atomic # 6 Polarization: 5.43 SS G_CDS: 4.39 Total: 9.82 kcal Atomic # 7 Polarization: -2.11 SS G_CDS: -2.33 Total: -4.44 kcal Atomic # 8 Polarization: -12.52 SS G_CDS: -3.11 Total: -15.63 kcal Atomic # 14 Polarization: -2.93 SS G_CDS: 2.08 Total: -0.85 kcal Atomic # 17 Polarization: -0.32 SS G_CDS: -0.07 Total: -0.39 kcal Total: -21.73 0.58 -21.15 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.830 kcal (2) G-P(sol) polarization free energy of solvation -21.727 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.897 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.577 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.150 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.320 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds