Wall clock time and date at job start Sat Mar 6 2021 13:16:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.33809 * 122.44813 * 2 1 4 4 C 1.50705 * 124.52581 * 359.97438 * 3 2 1 5 5 O 1.42900 * 109.46709 * 30.00573 * 4 3 2 6 6 Si 1.86298 * 109.46725 * 150.00034 * 4 3 2 7 7 S 1.70622 * 110.95451 * 179.97438 * 3 2 1 8 8 C 1.75834 * 91.56062 * 359.83208 * 7 3 2 9 9 C 1.46585 * 125.45914 * 180.20182 * 8 7 3 10 10 O 1.21704 * 119.99825 * 180.09704 * 9 8 7 11 11 N 1.34769 * 119.99803 * 0.10366 * 9 8 7 12 12 C 1.46505 * 120.00229 * 180.02562 * 11 9 8 13 13 H 1.09007 * 112.84352 * 25.32796 * 12 11 9 14 14 C 1.53778 * 113.61718 * 156.52664 * 12 11 9 15 15 C 1.53779 * 87.08241 * 89.11627 * 14 12 11 16 16 H 1.09001 * 113.61236 * 270.88513 * 15 14 12 17 17 C 1.50697 * 113.61409 * 139.98094 * 15 14 12 18 18 C 1.38333 * 120.00705 * 119.72584 * 17 15 14 19 19 Cl 1.73602 * 120.01162 * 359.97438 * 18 17 15 20 20 C 1.38372 * 119.97411 * 179.69503 * 18 17 15 21 21 C 1.38195 * 119.98488 * 0.60185 * 20 18 17 22 22 C 1.38266 * 120.01368 * 359.69748 * 21 20 18 23 23 C 1.38217 * 120.02612 * 359.97438 * 22 21 20 24 24 C 1.53773 * 113.61270 * 254.13692 * 12 11 9 25 25 C 1.36649 * 109.08528 * 0.29190 * 8 7 3 26 26 H 1.09003 * 109.46981 * 270.00022 * 1 2 3 27 27 H 1.09002 * 109.47450 * 29.99505 * 1 2 3 28 28 H 1.08998 * 109.47640 * 149.99895 * 1 2 3 29 29 H 1.09000 * 109.47122 * 270.00308 * 4 3 2 30 30 H 0.96694 * 114.00425 * 59.99832 * 5 4 3 31 31 H 1.48501 * 110.00190 * 58.68959 * 6 4 3 32 32 H 1.48505 * 109.99536 * 180.02562 * 6 4 3 33 33 H 0.97002 * 120.00344 * 359.97438 * 11 9 8 34 34 H 1.09004 * 113.61033 * 203.66405 * 14 12 11 35 35 H 1.09003 * 113.61494 * 334.56384 * 14 12 11 36 36 H 1.07999 * 120.00927 * 180.27122 * 20 18 17 37 37 H 1.07996 * 119.99607 * 179.72243 * 21 20 18 38 38 H 1.07998 * 119.98558 * 179.97438 * 22 21 20 39 39 H 1.07999 * 119.99654 * 180.02562 * 23 22 21 40 40 H 1.08999 * 113.61877 * 25.42656 * 24 12 11 41 41 H 1.09006 * 113.61768 * 156.33358 * 24 12 11 42 42 H 1.08002 * 123.35574 * 179.97438 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5162 -0.0006 5 8 0.3752 2.4983 0.6727 6 14 2.7923 3.6828 0.8778 7 16 3.8970 0.7892 0.0007 8 6 3.5937 -0.9428 0.0062 9 6 4.6231 -1.9863 0.0134 10 8 4.3000 -3.1597 0.0149 11 7 5.9272 -1.6464 0.0185 12 6 6.9561 -2.6893 0.0252 13 1 6.6088 -3.6291 -0.4042 14 6 8.3112 -2.2213 -0.5310 15 6 8.6624 -1.7912 0.9030 16 1 8.3634 -0.7697 1.1380 17 6 10.0879 -2.0891 1.2907 18 6 10.9356 -1.0584 1.6547 19 17 10.3580 0.5787 1.6645 20 6 12.2426 -1.3333 2.0165 21 6 12.7038 -2.6360 2.0021 22 6 11.8577 -3.6651 1.6322 23 6 10.5502 -3.3918 1.2772 24 6 7.6568 -2.8546 1.3840 25 6 2.2446 -1.1601 0.0005 26 1 -0.3633 0.0000 1.0277 27 1 -0.3634 0.8900 -0.5138 28 1 -0.3634 -0.8899 -0.5138 29 1 1.4937 2.8503 -1.0283 30 1 0.4256 2.2100 1.5943 31 1 4.1167 3.6864 0.2061 32 1 2.2220 5.0540 0.8847 33 1 6.1846 -0.7112 0.0170 34 1 8.9326 -3.0339 -0.9077 35 1 8.2323 -1.3885 -1.2298 36 1 12.9037 -0.5295 2.3051 37 1 13.7251 -2.8503 2.2802 38 1 12.2187 -4.6829 1.6207 39 1 9.8896 -4.1961 0.9887 40 1 7.0500 -2.5326 2.2303 41 1 8.0997 -3.8398 1.5300 42 1 1.8018 -2.1452 0.0019 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:58 Heat of formation + Delta-G solvation = 9.318026 kcal Electronic energy + Delta-G solvation = -26817.908152 eV Core-core repulsion = 22882.567674 eV Total energy + Delta-G solvation = -3935.340479 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.069 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -41.69437 -40.58750 -39.88802 -38.81138 -37.43096 -37.33377 -34.67133 -32.37691 -31.75991 -31.58874 -30.26674 -27.13849 -26.85230 -25.83933 -24.54050 -23.74357 -22.68825 -21.91926 -20.43639 -19.99538 -19.49172 -18.36215 -17.73878 -17.30884 -17.10156 -16.67789 -16.50805 -16.41329 -16.00524 -15.89561 -15.34857 -15.19326 -14.90233 -14.86476 -14.60351 -14.54171 -14.41235 -13.99778 -13.63992 -13.51984 -13.46676 -13.11072 -13.06131 -12.97893 -12.76406 -12.51565 -12.46989 -12.29914 -12.22197 -11.85543 -11.79021 -11.58003 -11.35058 -11.08226 -10.75116 -10.20550 -9.91533 -9.69795 -9.64772 -9.46503 -5.21228 -0.63926 0.10967 0.20386 0.26275 0.68442 1.05530 1.14468 1.31262 1.43566 1.80304 1.95403 2.15854 2.54231 3.21109 3.29649 3.49499 3.51755 3.56180 3.70249 3.76625 3.84451 3.96265 4.03767 4.08771 4.23000 4.26972 4.29511 4.40236 4.53628 4.57134 4.59410 4.63035 4.70390 4.78329 4.79806 4.86351 4.87353 4.91698 5.01900 5.02589 5.20262 5.32543 5.37597 5.39437 5.44449 5.50259 5.74919 6.33095 6.35240 7.08315 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.091 4.091 3 C -0.236 4.236 4 C -0.027 4.027 5 O -0.529 6.529 6 Si 0.658 3.342 7 S 0.193 5.807 8 C -0.263 4.263 9 C 0.596 3.404 10 O -0.522 6.522 11 N -0.710 5.710 12 C 0.122 3.878 13 H 0.110 0.890 14 C -0.134 4.134 15 C -0.082 4.082 16 H 0.105 0.895 17 C -0.061 4.061 18 C -0.033 4.033 19 Cl -0.068 7.068 20 C -0.108 4.108 21 C -0.111 4.111 22 C -0.111 4.111 23 C -0.106 4.106 24 C -0.142 4.142 25 C -0.045 4.045 26 H 0.072 0.928 27 H 0.084 0.916 28 H 0.062 0.938 29 H 0.124 0.876 30 H 0.381 0.619 31 H -0.237 1.237 32 H -0.234 1.234 33 H 0.399 0.601 34 H 0.101 0.899 35 H 0.079 0.921 36 H 0.133 0.867 37 H 0.132 0.868 38 H 0.130 0.870 39 H 0.133 0.867 40 H 0.078 0.922 41 H 0.098 0.902 42 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.273 0.788 1.903 3.068 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.104 4.104 3 C -0.355 4.355 4 C -0.140 4.140 5 O -0.335 6.335 6 Si 0.557 3.443 7 S 0.461 5.539 8 C -0.383 4.383 9 C 0.383 3.617 10 O -0.400 6.400 11 N -0.361 5.361 12 C 0.017 3.983 13 H 0.128 0.872 14 C -0.171 4.171 15 C -0.100 4.100 16 H 0.123 0.877 17 C -0.062 4.062 18 C -0.060 4.060 19 Cl -0.039 7.039 20 C -0.127 4.127 21 C -0.129 4.129 22 C -0.129 4.129 23 C -0.124 4.124 24 C -0.180 4.180 25 C -0.078 4.078 26 H 0.091 0.909 27 H 0.103 0.897 28 H 0.081 0.919 29 H 0.141 0.859 30 H 0.229 0.771 31 H -0.161 1.161 32 H -0.157 1.157 33 H 0.234 0.766 34 H 0.120 0.880 35 H 0.097 0.903 36 H 0.151 0.849 37 H 0.150 0.850 38 H 0.148 0.852 39 H 0.151 0.849 40 H 0.096 0.904 41 H 0.116 0.884 42 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 3.617 1.938 1.252 4.291 hybrid contribution -1.218 -0.500 -0.457 1.394 sum 2.399 1.438 0.796 2.908 Atomic orbital electron populations 1.20647 0.88487 1.03394 1.02892 1.18724 0.98483 0.90463 1.02682 1.24473 0.98348 1.00963 1.11712 1.24460 0.92223 0.95284 1.02025 1.86530 1.27657 1.90051 1.29261 0.94801 0.78224 0.80791 0.90473 1.83064 1.03351 0.98351 1.69152 1.24543 0.97967 0.96975 1.18784 1.16918 0.81466 0.87445 0.75908 1.90861 1.81512 1.18143 1.49440 1.45533 1.05064 1.09769 1.75783 1.21858 0.86917 0.92295 0.97272 0.87247 1.23418 0.95501 1.02394 0.95834 1.21794 0.90545 1.00801 0.96898 0.87673 1.19542 0.95176 0.92273 0.99226 1.20862 0.94720 0.85649 1.04750 1.98371 1.88917 1.19525 1.97110 1.21105 0.93910 0.97838 0.99845 1.21176 1.00331 0.91948 0.99481 1.21296 0.93628 0.99775 0.98234 1.21017 0.96043 0.95494 0.99857 1.23619 0.96972 0.99522 0.97906 1.20747 0.90874 1.00184 0.95995 0.90887 0.89681 0.91900 0.85872 0.77086 1.16121 1.15694 0.76647 0.88023 0.90267 0.84870 0.84994 0.85201 0.84897 0.90370 0.88380 0.82672 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.08 8.67 36.01 0.31 0.39 16 2 C -0.09 -0.03 5.75 -106.45 -0.61 -0.64 16 3 C -0.24 0.10 5.53 -35.86 -0.20 -0.10 16 4 C -0.03 0.03 2.76 36.01 0.10 0.13 16 5 O -0.53 0.76 9.85 -35.23 -0.35 0.41 16 6 Si 0.66 -1.22 31.32 -169.99 -5.32 -6.54 16 7 S 0.19 -0.12 19.79 -107.50 -2.13 -2.25 16 8 C -0.26 -0.39 6.45 -36.79 -0.24 -0.62 16 9 C 0.60 1.64 7.78 -12.90 -0.10 1.54 16 10 O -0.52 -3.23 16.46 5.18 0.09 -3.15 16 11 N -0.71 -0.09 5.26 -54.35 -0.29 -0.37 16 12 C 0.12 -0.06 4.29 -67.12 -0.29 -0.34 16 13 H 0.11 0.08 7.50 -51.93 -0.39 -0.31 16 14 C -0.13 0.24 7.29 -25.92 -0.19 0.05 16 15 C -0.08 0.09 3.65 -90.82 -0.33 -0.24 16 16 H 0.11 -0.10 6.58 -51.93 -0.34 -0.44 16 17 C -0.06 0.01 5.29 -104.59 -0.55 -0.55 16 18 C -0.03 -0.02 6.31 -39.50 -0.25 -0.27 16 19 Cl -0.07 -0.05 27.16 -51.86 -1.41 -1.46 16 20 C -0.11 -0.01 9.83 -39.55 -0.39 -0.39 16 21 C -0.11 0.09 10.05 -39.59 -0.40 -0.31 16 22 C -0.11 0.12 10.05 -39.58 -0.40 -0.28 16 23 C -0.11 0.10 8.61 -39.59 -0.34 -0.24 16 24 C -0.14 0.14 7.27 -25.78 -0.19 -0.04 16 25 C -0.04 -0.06 9.80 -40.43 -0.40 -0.46 16 26 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.08 -0.01 6.41 -51.93 -0.33 -0.34 16 28 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 29 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 30 H 0.38 -1.81 8.66 45.56 0.39 -1.41 16 31 H -0.24 0.04 7.09 56.52 0.40 0.44 16 32 H -0.23 -0.22 7.11 56.52 0.40 0.18 16 33 H 0.40 -0.64 7.82 -40.82 -0.32 -0.96 16 34 H 0.10 -0.24 7.72 -51.93 -0.40 -0.64 16 35 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 36 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 37 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 38 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 39 H 0.13 -0.35 6.66 -52.49 -0.35 -0.70 16 40 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 41 H 0.10 -0.18 6.32 -51.93 -0.33 -0.51 16 42 H 0.16 0.21 8.06 -52.49 -0.42 -0.22 16 LS Contribution 373.85 15.07 5.63 5.63 Total: 0.00 -6.45 373.85 -13.29 -19.74 By element: Atomic # 1 Polarization: -4.58 SS G_CDS: -5.06 Total: -9.64 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: -4.46 Total: -2.38 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.29 Total: -0.37 kcal Atomic # 8 Polarization: -2.47 SS G_CDS: -0.26 Total: -2.74 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.32 Total: -6.54 kcal Atomic # 16 Polarization: -0.12 SS G_CDS: -2.13 Total: -2.25 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -1.41 Total: -1.46 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -6.45 -13.29 -19.74 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.059 kcal (2) G-P(sol) polarization free energy of solvation -6.451 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.290 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.741 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.318 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds