Wall clock time and date at job start Sat Mar 6 2021 13:16:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.33809 * 122.44813 * 2 1 4 4 C 1.50705 * 124.52581 * 359.97438 * 3 2 1 5 5 O 1.42900 * 109.46709 * 30.00573 * 4 3 2 6 6 Si 1.86298 * 109.46725 * 150.00034 * 4 3 2 7 7 S 1.70622 * 110.95451 * 179.97438 * 3 2 1 8 8 C 1.75834 * 91.56062 * 359.83208 * 7 3 2 9 9 C 1.46585 * 125.45914 * 180.20182 * 8 7 3 10 10 O 1.21704 * 119.99825 * 180.09704 * 9 8 7 11 11 N 1.34769 * 119.99803 * 0.10366 * 9 8 7 12 12 C 1.46505 * 120.00229 * 180.02562 * 11 9 8 13 13 H 1.09007 * 112.84352 * 25.32796 * 12 11 9 14 14 C 1.53778 * 113.61718 * 156.52664 * 12 11 9 15 15 C 1.53779 * 87.08241 * 89.11627 * 14 12 11 16 16 H 1.09001 * 113.61236 * 270.88513 * 15 14 12 17 17 C 1.50697 * 113.61409 * 139.98094 * 15 14 12 18 18 C 1.38333 * 120.00705 * 119.72584 * 17 15 14 19 19 Cl 1.73602 * 120.01162 * 359.97438 * 18 17 15 20 20 C 1.38372 * 119.97411 * 179.69503 * 18 17 15 21 21 C 1.38195 * 119.98488 * 0.60185 * 20 18 17 22 22 C 1.38266 * 120.01368 * 359.69748 * 21 20 18 23 23 C 1.38217 * 120.02612 * 359.97438 * 22 21 20 24 24 C 1.53773 * 113.61270 * 254.13692 * 12 11 9 25 25 C 1.36649 * 109.08528 * 0.29190 * 8 7 3 26 26 H 1.09003 * 109.46981 * 270.00022 * 1 2 3 27 27 H 1.09002 * 109.47450 * 29.99505 * 1 2 3 28 28 H 1.08998 * 109.47640 * 149.99895 * 1 2 3 29 29 H 1.09000 * 109.47122 * 270.00308 * 4 3 2 30 30 H 0.96694 * 114.00425 * 59.99832 * 5 4 3 31 31 H 1.48501 * 110.00190 * 58.68959 * 6 4 3 32 32 H 1.48505 * 109.99536 * 180.02562 * 6 4 3 33 33 H 0.97002 * 120.00344 * 359.97438 * 11 9 8 34 34 H 1.09004 * 113.61033 * 203.66405 * 14 12 11 35 35 H 1.09003 * 113.61494 * 334.56384 * 14 12 11 36 36 H 1.07999 * 120.00927 * 180.27122 * 20 18 17 37 37 H 1.07996 * 119.99607 * 179.72243 * 21 20 18 38 38 H 1.07998 * 119.98558 * 179.97438 * 22 21 20 39 39 H 1.07999 * 119.99654 * 180.02562 * 23 22 21 40 40 H 1.08999 * 113.61877 * 25.42656 * 24 12 11 41 41 H 1.09006 * 113.61768 * 156.33358 * 24 12 11 42 42 H 1.08002 * 123.35574 * 179.97438 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5162 -0.0006 5 8 0.3752 2.4983 0.6727 6 14 2.7923 3.6828 0.8778 7 16 3.8970 0.7892 0.0007 8 6 3.5937 -0.9428 0.0062 9 6 4.6231 -1.9863 0.0134 10 8 4.3000 -3.1597 0.0149 11 7 5.9272 -1.6464 0.0185 12 6 6.9561 -2.6893 0.0252 13 1 6.6088 -3.6291 -0.4042 14 6 8.3112 -2.2213 -0.5310 15 6 8.6624 -1.7912 0.9030 16 1 8.3634 -0.7697 1.1380 17 6 10.0879 -2.0891 1.2907 18 6 10.9356 -1.0584 1.6547 19 17 10.3580 0.5787 1.6645 20 6 12.2426 -1.3333 2.0165 21 6 12.7038 -2.6360 2.0021 22 6 11.8577 -3.6651 1.6322 23 6 10.5502 -3.3918 1.2772 24 6 7.6568 -2.8546 1.3840 25 6 2.2446 -1.1601 0.0005 26 1 -0.3633 0.0000 1.0277 27 1 -0.3634 0.8900 -0.5138 28 1 -0.3634 -0.8899 -0.5138 29 1 1.4937 2.8503 -1.0283 30 1 0.4256 2.2100 1.5943 31 1 4.1167 3.6864 0.2061 32 1 2.2220 5.0540 0.8847 33 1 6.1846 -0.7112 0.0170 34 1 8.9326 -3.0339 -0.9077 35 1 8.2323 -1.3885 -1.2298 36 1 12.9037 -0.5295 2.3051 37 1 13.7251 -2.8503 2.2802 38 1 12.2187 -4.6829 1.6207 39 1 9.8896 -4.1961 0.9887 40 1 7.0500 -2.5326 2.2303 41 1 8.0997 -3.8398 1.5300 42 1 1.8018 -2.1452 0.0019 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:57 Heat of formation + Delta-G solvation = 15.970321 kcal Electronic energy + Delta-G solvation = -26817.619687 eV Core-core repulsion = 22882.567674 eV Total energy + Delta-G solvation = -3935.052014 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.069 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.70241 -40.62629 -39.87164 -38.82537 -37.41551 -37.28097 -34.78055 -32.37174 -31.66873 -31.54709 -30.21584 -27.13947 -26.76745 -25.79152 -24.53129 -23.67138 -22.62919 -22.00716 -20.43328 -19.95923 -19.52463 -18.28631 -17.70917 -17.33635 -17.06588 -16.66088 -16.49860 -16.34208 -16.07556 -15.89195 -15.36867 -15.16938 -14.86638 -14.77312 -14.58776 -14.50587 -14.41549 -13.96671 -13.57359 -13.49044 -13.41010 -13.10519 -12.97114 -12.96266 -12.70455 -12.48336 -12.45403 -12.27426 -12.15210 -11.81696 -11.78548 -11.55003 -11.31682 -11.26575 -10.68544 -10.28925 -9.83993 -9.70576 -9.58692 -9.44872 -5.08918 -0.69927 0.17991 0.24477 0.28777 0.67314 1.09085 1.16675 1.30301 1.52111 1.87168 1.90182 2.02079 2.62860 3.35247 3.36081 3.55240 3.57899 3.62635 3.70678 3.83997 3.93352 4.08180 4.09502 4.15727 4.24821 4.38588 4.39788 4.43476 4.56482 4.59880 4.70720 4.74111 4.74593 4.83139 4.87173 4.91453 4.95922 5.00036 5.01605 5.07429 5.29804 5.37043 5.38516 5.47955 5.49285 5.54738 5.86757 6.26451 6.65708 6.95456 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 C -0.099 4.099 3 C -0.233 4.233 4 C -0.029 4.029 5 O -0.538 6.538 6 Si 0.726 3.274 7 S 0.227 5.773 8 C -0.283 4.283 9 C 0.594 3.406 10 O -0.566 6.566 11 N -0.700 5.700 12 C 0.116 3.884 13 H 0.097 0.903 14 C -0.123 4.123 15 C -0.078 4.078 16 H 0.102 0.898 17 C -0.070 4.070 18 C -0.050 4.050 19 Cl -0.076 7.076 20 C -0.121 4.121 21 C -0.117 4.117 22 C -0.116 4.116 23 C -0.111 4.111 24 C -0.137 4.137 25 C -0.053 4.053 26 H 0.085 0.915 27 H 0.080 0.920 28 H 0.060 0.940 29 H 0.123 0.877 30 H 0.396 0.604 31 H -0.256 1.256 32 H -0.272 1.272 33 H 0.408 0.592 34 H 0.111 0.889 35 H 0.083 0.917 36 H 0.139 0.861 37 H 0.149 0.851 38 H 0.149 0.851 39 H 0.149 0.851 40 H 0.068 0.932 41 H 0.108 0.892 42 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.851 0.960 2.077 3.656 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.111 4.111 3 C -0.352 4.352 4 C -0.141 4.141 5 O -0.346 6.346 6 Si 0.628 3.372 7 S 0.496 5.504 8 C -0.403 4.403 9 C 0.381 3.619 10 O -0.446 6.446 11 N -0.350 5.350 12 C 0.011 3.989 13 H 0.115 0.885 14 C -0.161 4.161 15 C -0.096 4.096 16 H 0.120 0.880 17 C -0.070 4.070 18 C -0.077 4.077 19 Cl -0.047 7.047 20 C -0.140 4.140 21 C -0.135 4.135 22 C -0.133 4.133 23 C -0.129 4.129 24 C -0.175 4.175 25 C -0.087 4.087 26 H 0.104 0.896 27 H 0.099 0.901 28 H 0.079 0.921 29 H 0.140 0.860 30 H 0.246 0.754 31 H -0.182 1.182 32 H -0.198 1.198 33 H 0.244 0.756 34 H 0.130 0.870 35 H 0.101 0.899 36 H 0.157 0.843 37 H 0.167 0.833 38 H 0.167 0.833 39 H 0.166 0.834 40 H 0.087 0.913 41 H 0.126 0.874 42 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 4.217 2.119 1.439 4.934 hybrid contribution -1.381 -0.508 -0.505 1.555 sum 2.836 1.611 0.934 3.393 Atomic orbital electron populations 1.20634 0.87758 1.03036 1.03613 1.18785 0.99040 0.90187 1.03080 1.24670 0.98554 1.01278 1.10741 1.24558 0.92564 0.94718 1.02291 1.86506 1.27464 1.90080 1.30579 0.94001 0.75964 0.77971 0.89265 1.82903 1.02924 0.96304 1.68310 1.24527 0.97781 0.98076 1.19868 1.17138 0.82284 0.87132 0.75315 1.90828 1.82225 1.19818 1.51769 1.45489 1.04502 1.10489 1.74540 1.21923 0.87196 0.91788 0.98015 0.88516 1.23388 0.94344 1.02748 0.95578 1.21736 0.90141 1.00527 0.97196 0.87975 1.19674 0.95381 0.92549 0.99430 1.21042 0.95297 0.85544 1.05767 1.98361 1.89019 1.20112 1.97205 1.21295 0.93929 0.98602 1.00160 1.21448 1.01280 0.91652 0.99129 1.21598 0.93534 1.00693 0.97518 1.21261 0.96528 0.95549 0.99534 1.23607 0.96733 1.00145 0.97054 1.20827 0.91155 1.00433 0.96251 0.89645 0.90145 0.92060 0.85992 0.75360 1.18170 1.19776 0.75573 0.87035 0.89858 0.84349 0.83335 0.83332 0.83364 0.91338 0.87381 0.83363 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.15 8.67 71.24 0.62 0.77 16 2 C -0.10 -0.07 5.75 -21.05 -0.12 -0.19 16 3 C -0.23 0.27 5.53 24.68 0.14 0.40 16 4 C -0.03 0.09 2.76 71.24 0.20 0.29 16 5 O -0.54 1.94 9.85 -148.98 -1.47 0.47 16 6 Si 0.73 -2.98 31.32 68.60 2.15 -0.83 16 7 S 0.23 -0.32 19.79 -56.49 -1.12 -1.44 16 8 C -0.28 -1.07 6.45 24.08 0.16 -0.92 16 9 C 0.59 4.05 7.78 86.42 0.67 4.73 16 10 O -0.57 -8.16 16.46 -4.36 -0.07 -8.23 16 11 N -0.70 -0.69 5.26 -444.09 -2.34 -3.03 16 12 C 0.12 -0.04 4.29 45.51 0.20 0.16 16 13 H 0.10 0.26 7.50 -2.38 -0.02 0.24 16 14 C -0.12 0.46 7.29 31.12 0.23 0.69 16 15 C -0.08 0.17 3.65 -10.92 -0.04 0.13 16 16 H 0.10 -0.17 6.58 -2.39 -0.02 -0.18 16 17 C -0.07 0.03 5.29 -19.84 -0.11 -0.08 16 18 C -0.05 -0.08 6.31 22.32 0.14 0.06 16 19 Cl -0.08 -0.14 27.16 -2.72 -0.07 -0.21 16 20 C -0.12 -0.02 9.83 22.29 0.22 0.20 16 21 C -0.12 0.27 10.05 22.27 0.22 0.49 16 22 C -0.12 0.37 10.05 22.27 0.22 0.59 16 23 C -0.11 0.29 8.61 22.26 0.19 0.48 16 24 C -0.14 0.24 7.27 31.21 0.23 0.46 16 25 C -0.05 -0.20 9.80 21.72 0.21 0.01 16 26 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 27 H 0.08 -0.03 6.41 -2.39 -0.02 -0.05 16 28 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 29 H 0.12 -0.32 7.96 -2.39 -0.02 -0.34 16 30 H 0.40 -4.18 8.66 -74.06 -0.64 -4.82 16 31 H -0.26 0.23 7.09 99.48 0.71 0.94 16 32 H -0.27 -0.66 7.11 99.48 0.71 0.05 16 33 H 0.41 -1.21 7.82 -92.71 -0.72 -1.94 16 34 H 0.11 -0.61 7.72 -2.38 -0.02 -0.63 16 35 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 36 H 0.14 -0.26 8.06 -2.91 -0.02 -0.29 16 37 H 0.15 -0.94 8.06 -2.91 -0.02 -0.97 16 38 H 0.15 -1.11 8.06 -2.91 -0.02 -1.13 16 39 H 0.15 -0.95 6.66 -2.91 -0.02 -0.97 16 40 H 0.07 0.03 8.14 -2.39 -0.02 0.01 16 41 H 0.11 -0.42 6.32 -2.38 -0.02 -0.43 16 42 H 0.15 0.68 8.06 -2.91 -0.02 0.65 16 Total: 0.00 -15.90 373.85 0.21 -15.69 By element: Atomic # 1 Polarization: -10.47 SS G_CDS: -0.25 Total: -10.72 kcal Atomic # 6 Polarization: 4.91 SS G_CDS: 3.37 Total: 8.29 kcal Atomic # 7 Polarization: -0.69 SS G_CDS: -2.34 Total: -3.03 kcal Atomic # 8 Polarization: -6.22 SS G_CDS: -1.54 Total: -7.76 kcal Atomic # 14 Polarization: -2.98 SS G_CDS: 2.15 Total: -0.83 kcal Atomic # 16 Polarization: -0.32 SS G_CDS: -1.12 Total: -1.44 kcal Atomic # 17 Polarization: -0.14 SS G_CDS: -0.07 Total: -0.21 kcal Total: -15.90 0.21 -15.69 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.665 kcal (2) G-P(sol) polarization free energy of solvation -15.905 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.760 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.210 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.694 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.970 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds