Wall clock time and date at job start Sat Mar 6 2021 13:17:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86302 * 109.46950 * 2 1 4 4 C 1.50701 * 109.46597 * 119.99750 * 2 1 3 5 5 C 1.32770 * 124.71572 * 65.00526 * 4 2 1 6 6 C 1.44419 * 113.08480 * 180.02562 * 5 4 2 7 7 C 1.47191 * 123.46025 * 179.97438 * 6 5 4 8 8 O 1.21636 * 120.00038 * 359.97438 * 7 6 5 9 9 N 1.34784 * 120.00025 * 180.02562 * 7 6 5 10 10 C 1.46496 * 119.99758 * 179.97438 * 9 7 6 11 11 H 1.09001 * 112.85032 * 336.19438 * 10 9 7 12 12 C 1.53782 * 113.68971 * 107.45966 * 10 9 7 13 13 C 1.53962 * 87.11063 * 89.19569 * 12 10 9 14 14 H 1.08993 * 113.61598 * 270.84305 * 13 12 10 15 15 C 1.50700 * 113.66521 * 139.88647 * 13 12 10 16 16 C 1.38330 * 120.00457 * 142.27814 * 15 13 12 17 17 Cl 1.73603 * 120.01271 * 359.97438 * 16 15 13 18 18 C 1.38373 * 119.97422 * 179.70056 * 16 15 13 19 19 C 1.38197 * 119.98403 * 0.55704 * 18 16 15 20 20 C 1.38263 * 120.01408 * 359.74097 * 19 18 16 21 21 C 1.38217 * 120.02490 * 359.97438 * 20 19 18 22 22 C 1.53781 * 113.61266 * 204.99541 * 10 9 7 23 23 C 1.36010 * 113.08219 * 0.24394 * 6 5 4 24 24 S 1.70457 * 110.81227 * 359.62569 * 23 6 5 25 25 H 0.96703 * 113.99735 * 60.00587 * 1 2 3 26 26 H 1.09000 * 109.47527 * 239.99658 * 2 1 3 27 27 H 1.48495 * 109.99971 * 298.67401 * 3 2 1 28 28 H 1.48501 * 110.00244 * 59.99789 * 3 2 1 29 29 H 1.07996 * 123.45183 * 0.02562 * 5 4 2 30 30 H 0.97001 * 119.99554 * 359.97438 * 9 7 6 31 31 H 1.08997 * 113.61668 * 203.67120 * 12 10 9 32 32 H 1.08998 * 113.61674 * 334.49629 * 12 10 9 33 33 H 1.07998 * 120.00972 * 180.27648 * 18 16 15 34 34 H 1.08000 * 119.99234 * 179.77267 * 19 18 16 35 35 H 1.07994 * 119.98510 * 180.02562 * 20 19 18 36 36 H 1.07997 * 119.99259 * 180.02562 * 21 20 19 37 37 H 1.09002 * 113.61445 * 25.35018 * 22 10 9 38 38 H 1.09002 * 113.61408 * 156.16749 * 22 10 9 39 39 H 1.07997 * 124.59551 * 179.72872 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.7484 -2.0003 1.4865 6 6 2.3353 -2.4179 2.7382 7 6 2.2682 -3.7980 3.2456 8 8 1.6952 -4.6557 2.6011 9 7 2.8407 -4.1110 4.4249 10 6 2.7734 -5.4845 4.9301 11 1 1.9322 -6.0448 4.5220 12 6 4.1116 -6.2380 4.8516 13 6 4.4175 -5.6826 6.2546 14 1 4.9193 -4.7152 6.2414 15 6 5.0868 -6.6783 7.1667 16 6 6.0716 -6.2601 8.0435 17 17 6.5372 -4.5884 8.0931 18 6 6.6814 -7.1737 8.8850 19 6 6.3144 -8.5053 8.8409 20 6 5.3343 -8.9238 7.9599 21 6 4.7207 -8.0106 7.1233 22 6 2.8965 -5.5849 6.4597 23 6 2.9514 -1.4038 3.4029 24 16 2.8385 0.0528 2.5247 25 1 -0.3933 0.4416 -0.7651 26 1 1.7924 -0.5139 -0.8899 27 1 1.5880 2.4585 -1.2243 28 1 1.5614 2.4680 1.2085 29 1 1.2156 -2.6685 0.8263 30 1 3.2974 -3.4269 4.9391 31 1 4.0015 -7.3222 4.8272 32 1 4.7792 -5.8628 4.0760 33 1 7.4471 -6.8471 9.5730 34 1 6.7928 -9.2192 9.4951 35 1 5.0476 -9.9644 7.9261 36 1 3.9550 -8.3379 6.4357 37 1 2.5837 -4.6815 6.9832 38 1 2.4528 -6.4898 6.8750 39 1 3.4467 -1.5076 4.3570 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_6894386.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:17:01 Heat of formation + Delta-G solvation = 14.551871 kcal Electronic energy + Delta-G solvation = -24647.552368 eV Core-core repulsion = 20867.976465 eV Total energy + Delta-G solvation = -3779.575903 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.053 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.68821 -40.54344 -39.17318 -38.46999 -37.42672 -37.17034 -34.64707 -32.28776 -31.75128 -31.38494 -26.98310 -26.81592 -26.72959 -25.29881 -23.76523 -22.69532 -21.98149 -20.45004 -20.26376 -18.76889 -18.54558 -18.36718 -17.96343 -17.05691 -16.57572 -16.48895 -16.19788 -15.96370 -15.76197 -15.22049 -15.14411 -14.84863 -14.80831 -14.40024 -14.17713 -13.93766 -13.82068 -13.75398 -13.53316 -13.32272 -13.05643 -12.75870 -12.71490 -12.50779 -12.40025 -12.22907 -11.98141 -11.81029 -11.56613 -11.31420 -10.86492 -10.62831 -10.13120 -9.95976 -9.89738 -9.63965 -9.47170 -5.14322 -0.33955 0.11858 0.21316 0.34052 0.70294 0.92672 1.14788 1.16549 1.50290 1.82816 2.06524 2.37446 2.55335 3.20574 3.33460 3.51441 3.57905 3.62345 3.76445 3.84618 3.86931 3.97455 3.99585 4.05915 4.26750 4.28348 4.30548 4.34515 4.57810 4.62058 4.64423 4.74059 4.77994 4.82727 4.88425 4.94354 5.02869 5.09390 5.21183 5.24394 5.35957 5.40849 5.56612 5.75862 6.32895 6.45828 7.22926 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.035 4.035 3 Si 0.645 3.355 4 C -0.197 4.197 5 C -0.053 4.053 6 C -0.155 4.155 7 C 0.582 3.418 8 O -0.529 6.529 9 N -0.709 5.709 10 C 0.122 3.878 11 H 0.109 0.891 12 C -0.142 4.142 13 C -0.081 4.081 14 H 0.105 0.895 15 C -0.061 4.061 16 C -0.033 4.033 17 Cl -0.069 7.069 18 C -0.108 4.108 19 C -0.111 4.111 20 C -0.111 4.111 21 C -0.106 4.106 22 C -0.134 4.134 23 C -0.208 4.208 24 S 0.207 5.793 25 H 0.383 0.617 26 H 0.087 0.913 27 H -0.238 1.238 28 H -0.234 1.234 29 H 0.156 0.844 30 H 0.400 0.600 31 H 0.097 0.903 32 H 0.077 0.923 33 H 0.133 0.867 34 H 0.132 0.868 35 H 0.130 0.870 36 H 0.133 0.867 37 H 0.078 0.922 38 H 0.100 0.900 39 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.377 1.025 0.927 3.649 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.146 4.146 3 Si 0.544 3.456 4 C -0.314 4.314 5 C -0.083 4.083 6 C -0.173 4.173 7 C 0.368 3.632 8 O -0.406 6.406 9 N -0.361 5.361 10 C 0.017 3.983 11 H 0.127 0.873 12 C -0.181 4.181 13 C -0.100 4.100 14 H 0.123 0.877 15 C -0.062 4.062 16 C -0.060 4.060 17 Cl -0.040 7.040 18 C -0.127 4.127 19 C -0.130 4.130 20 C -0.129 4.129 21 C -0.124 4.124 22 C -0.172 4.172 23 C -0.346 4.346 24 S 0.473 5.527 25 H 0.232 0.768 26 H 0.105 0.895 27 H -0.161 1.161 28 H -0.157 1.157 29 H 0.173 0.827 30 H 0.235 0.765 31 H 0.115 0.885 32 H 0.096 0.904 33 H 0.151 0.849 34 H 0.150 0.850 35 H 0.148 0.852 36 H 0.151 0.849 37 H 0.097 0.903 38 H 0.118 0.882 39 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges 3.385 2.577 1.266 4.439 hybrid contribution -1.125 -1.214 -0.267 1.676 sum 2.260 1.364 1.000 2.822 Atomic orbital electron populations 1.86619 1.17329 1.80071 1.49930 1.24031 0.84584 1.10018 0.96006 0.95318 0.91851 0.75194 0.83269 1.23524 1.08921 0.97403 1.01530 1.21017 0.97571 0.94540 0.95127 1.20179 1.05844 0.93925 0.97347 1.17592 0.77975 0.87021 0.80568 1.90820 1.42921 1.49669 1.57228 1.45499 1.57688 1.10930 1.21945 1.21826 0.99192 0.82910 0.94420 0.87340 1.23601 0.97400 1.01054 0.96000 1.21765 0.95524 0.98270 0.94412 0.87716 1.19550 0.95528 0.94778 0.96345 1.20859 0.99230 0.85771 1.00136 1.98369 1.91376 1.16554 1.97681 1.21104 1.00132 0.92823 0.98654 1.21175 0.97591 0.95161 0.99027 1.21296 0.96083 1.00121 0.95427 1.21020 1.00247 0.91731 0.99421 1.23416 0.94586 1.03822 0.95330 1.25797 1.05206 0.98588 1.05018 1.83106 1.50083 1.08954 1.10555 0.76848 0.89489 1.16078 1.15748 0.82681 0.76536 0.88511 0.90444 0.84877 0.84995 0.85204 0.84896 0.90330 0.88181 0.81093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.57 12.86 -35.23 -0.45 -1.02 16 2 C -0.03 0.01 2.93 36.01 0.11 0.11 16 3 Si 0.65 -0.85 30.92 -169.99 -5.26 -6.10 16 4 C -0.20 -0.22 5.69 -36.18 -0.21 -0.43 16 5 C -0.05 -0.14 9.95 -39.02 -0.39 -0.52 16 6 C -0.15 -0.28 5.98 -104.63 -0.63 -0.91 16 7 C 0.58 1.78 7.79 -12.62 -0.10 1.68 16 8 O -0.53 -3.63 16.39 5.25 0.09 -3.54 16 9 N -0.71 0.04 5.24 -54.16 -0.28 -0.25 16 10 C 0.12 -0.04 4.32 -67.12 -0.29 -0.33 16 11 H 0.11 0.13 7.46 -51.93 -0.39 -0.26 16 12 C -0.14 0.12 7.27 -25.82 -0.19 -0.07 16 13 C -0.08 0.09 3.66 -90.86 -0.33 -0.24 16 14 H 0.10 -0.11 6.57 -51.93 -0.34 -0.46 16 15 C -0.06 0.00 5.29 -104.59 -0.55 -0.55 16 16 C -0.03 -0.03 6.31 -39.50 -0.25 -0.27 16 17 Cl -0.07 -0.05 27.16 -51.86 -1.41 -1.45 16 18 C -0.11 -0.01 9.83 -39.55 -0.39 -0.40 16 19 C -0.11 0.08 10.05 -39.59 -0.40 -0.32 16 20 C -0.11 0.11 10.05 -39.58 -0.40 -0.29 16 21 C -0.11 0.08 8.61 -39.59 -0.34 -0.26 16 22 C -0.13 0.22 7.29 -25.92 -0.19 0.03 16 23 C -0.21 0.15 10.38 29.93 0.31 0.47 16 24 S 0.21 -0.14 20.20 -107.50 -2.17 -2.31 16 25 H 0.38 -1.21 8.74 45.56 0.40 -0.81 16 26 H 0.09 -0.17 7.96 -51.93 -0.41 -0.58 16 27 H -0.24 -0.05 7.11 56.52 0.40 0.35 16 28 H -0.23 -0.32 7.11 56.52 0.40 0.08 16 29 H 0.16 0.49 8.06 -52.49 -0.42 0.07 16 30 H 0.40 -0.99 7.20 -40.82 -0.29 -1.28 16 31 H 0.10 -0.15 6.31 -51.93 -0.33 -0.48 16 32 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 33 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 34 H 0.13 -0.34 8.06 -52.49 -0.42 -0.76 16 35 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 36 H 0.13 -0.32 6.66 -52.49 -0.35 -0.67 16 37 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 38 H 0.10 -0.21 7.72 -51.93 -0.40 -0.61 16 39 H 0.17 -0.65 7.01 -52.49 -0.37 -1.01 16 LS Contribution 356.53 15.07 5.37 5.37 Total: 0.00 -7.79 356.53 -12.56 -20.35 By element: Atomic # 1 Polarization: -4.52 SS G_CDS: -4.22 Total: -8.74 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -4.23 Total: -2.30 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -0.28 Total: -0.25 kcal Atomic # 8 Polarization: -4.20 SS G_CDS: -0.37 Total: -4.57 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.26 Total: -6.10 kcal Atomic # 16 Polarization: -0.14 SS G_CDS: -2.17 Total: -2.31 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -1.41 Total: -1.45 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -7.79 -12.56 -20.35 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_6894386.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.904 kcal (2) G-P(sol) polarization free energy of solvation -7.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.113 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.561 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.353 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.552 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds