Wall clock time and date at job start Sat Mar 6 2021 13:17:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37932 * 120.07410 * 2 1 4 4 C 1.38382 * 120.14731 * 180.02562 * 3 2 1 5 5 C 1.50695 * 119.85728 * 180.02562 * 4 3 2 6 6 C 1.38345 * 120.29003 * 359.97438 * 4 3 2 7 7 C 1.50700 * 119.92695 * 180.02562 * 6 4 3 8 8 O 1.42897 * 109.46962 * 285.00120 * 7 6 4 9 9 Si 1.86300 * 109.47253 * 164.99897 * 7 6 4 10 10 C 1.37979 * 120.14203 * 359.74391 * 6 4 3 11 11 C 1.39555 * 119.85422 * 0.53259 * 10 6 4 12 12 C 1.47841 * 120.14229 * 179.74725 * 11 10 6 13 13 O 1.21559 * 120.00104 * 173.74496 * 12 11 10 14 14 N 1.34774 * 120.00391 * 353.74215 * 12 11 10 15 15 C 1.46500 * 120.00389 * 180.02562 * 14 12 11 16 16 H 1.08999 * 112.85107 * 25.32939 * 15 14 12 17 17 C 1.53782 * 113.61758 * 156.53048 * 15 14 12 18 18 C 1.53785 * 87.08044 * 89.19813 * 17 15 14 19 19 H 1.09000 * 113.61360 * 270.79896 * 18 17 15 20 20 C 1.50698 * 113.60951 * 139.98176 * 18 17 15 21 21 C 1.38335 * 120.00298 * 120.00099 * 20 18 17 22 22 Cl 1.73600 * 120.01510 * 359.97438 * 21 20 18 23 23 C 1.38378 * 119.97201 * 179.97438 * 21 20 18 24 24 C 1.38198 * 119.98514 * 0.02562 * 23 21 20 25 25 C 1.38257 * 120.01483 * 0.02562 * 24 23 21 26 26 C 1.38226 * 120.02529 * 359.69627 * 25 24 23 27 27 C 1.53786 * 113.61141 * 254.13884 * 15 14 12 28 28 H 1.09002 * 109.46822 * 263.38808 * 1 2 3 29 29 H 1.09002 * 109.46812 * 23.38992 * 1 2 3 30 30 H 1.09002 * 109.47042 * 143.38721 * 1 2 3 31 31 H 1.08001 * 119.92642 * 0.02562 * 3 2 1 32 32 H 1.08994 * 109.47449 * 89.99682 * 5 4 3 33 33 H 1.09000 * 109.47267 * 209.99876 * 5 4 3 34 34 H 1.08997 * 109.47100 * 329.99664 * 5 4 3 35 35 H 1.09006 * 109.46908 * 44.99797 * 7 6 4 36 36 H 0.96698 * 113.99753 * 299.99918 * 8 7 6 37 37 H 1.48507 * 109.99808 * 58.67696 * 9 7 6 38 38 H 1.48490 * 110.00101 * 180.02562 * 9 7 6 39 39 H 1.08007 * 120.07042 * 180.25472 * 10 6 4 40 40 H 0.97005 * 119.99845 * 0.02562 * 14 12 11 41 41 H 1.08997 * 113.61222 * 203.74869 * 17 15 14 42 42 H 1.09004 * 113.61057 * 334.65230 * 17 15 14 43 43 H 1.08005 * 120.00883 * 179.97438 * 23 21 20 44 44 H 1.07997 * 119.98963 * 179.97438 * 24 23 21 45 45 H 1.07999 * 119.98803 * 180.02562 * 25 24 23 46 46 H 1.08000 * 119.99077 * 180.30121 * 26 25 24 47 47 H 1.08993 * 113.61934 * 25.34550 * 27 15 14 48 48 H 1.09003 * 113.61101 * 156.25022 * 27 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1936 0.0000 4 6 3.5821 1.1954 -0.0005 5 6 4.3306 2.5033 0.0001 6 6 4.2814 0.0017 -0.0005 7 6 5.7883 0.0132 -0.0005 8 8 6.2619 0.3655 -1.3019 9 14 6.4223 -1.6786 0.4541 10 6 3.6020 -1.1993 0.0053 11 6 2.2065 -1.2081 0.0000 12 6 1.4722 -2.4912 0.0006 13 8 0.2617 -2.4987 0.1107 14 7 2.1449 -3.6527 -0.1210 15 6 1.4172 -4.9242 -0.1209 16 1 0.3844 -4.8208 -0.4537 17 6 2.1760 -6.0684 -0.8137 18 6 2.8090 -6.3718 0.5546 19 1 3.7324 -5.8230 0.7399 20 6 2.9345 -7.8445 0.8484 21 6 4.1804 -8.4005 1.0770 22 17 5.5997 -7.4022 1.0250 23 6 4.2949 -9.7529 1.3472 24 6 3.1647 -10.5471 1.3879 25 6 1.9199 -9.9910 1.1583 26 6 1.8044 -8.6392 0.8940 27 6 1.5662 -5.7192 1.1870 28 1 -0.3633 -0.1183 1.0209 29 1 -0.3633 0.9432 -0.4080 30 1 -0.3633 -0.8249 -0.6129 31 1 1.6582 2.1290 0.0004 32 1 4.5115 2.8180 1.0278 33 1 5.2833 2.3769 -0.5142 34 1 3.7385 3.2610 -0.5131 35 1 6.1461 0.7427 0.7261 36 1 5.9812 -0.2415 -2.0003 37 1 5.9152 -2.6872 -0.5109 38 1 7.9071 -1.6804 0.4582 39 1 4.1492 -2.1305 0.0095 40 1 3.1110 -3.6468 -0.2085 41 1 1.5270 -6.8635 -1.1805 42 1 2.8931 -5.7274 -1.5605 43 1 5.2673 -10.1877 1.5254 44 1 3.2540 -11.6026 1.5984 45 1 1.0369 -10.6121 1.1906 46 1 0.8313 -8.2045 0.7195 47 1 1.7916 -5.0969 2.0530 48 1 0.7502 -6.4188 1.3681 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:17:09 Heat of formation + Delta-G solvation = 11.024389 kcal Electronic energy + Delta-G solvation = -31071.530138 eV Core-core repulsion = 26891.573788 eV Total energy + Delta-G solvation = -4179.956351 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.128 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -41.93596 -41.12912 -40.03661 -38.86509 -37.71817 -37.42245 -35.03565 -34.40137 -33.23667 -31.72034 -31.66707 -29.32792 -28.54674 -26.74550 -26.27952 -25.57087 -23.92178 -23.64199 -22.97943 -22.25753 -21.08012 -20.11459 -19.20823 -18.28692 -17.59018 -17.44715 -16.91322 -16.61749 -16.40516 -16.34193 -16.17780 -16.05940 -15.73216 -15.18642 -15.14235 -14.85665 -14.77665 -14.65180 -14.56922 -14.37194 -14.10875 -13.90413 -13.53549 -13.41111 -13.29699 -13.08014 -12.95757 -12.84955 -12.72547 -12.66210 -12.54518 -12.47928 -12.15550 -11.98487 -11.82781 -11.76615 -11.52673 -11.26432 -10.74381 -10.61174 -10.19685 -9.91266 -9.83770 -9.62097 -9.58133 -4.99329 -0.26298 0.15721 0.18008 0.28864 1.16065 1.23744 1.47270 1.70466 1.88931 2.00032 2.61709 2.63641 3.38211 3.39201 3.45219 3.57684 3.58824 3.66877 3.68791 3.81600 3.85651 3.94828 4.10088 4.13932 4.16477 4.22722 4.38988 4.40050 4.49848 4.53452 4.57055 4.61608 4.69023 4.71906 4.74945 4.78530 4.80085 4.81705 4.88170 4.92252 4.98105 5.00858 5.04559 5.10676 5.16927 5.27933 5.29992 5.42635 5.48164 5.49539 5.50016 5.59964 5.80334 5.86785 6.39362 6.45976 7.10368 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.023 4.023 3 C -0.136 4.136 4 C -0.027 4.027 5 C -0.127 4.127 6 C -0.134 4.134 7 C -0.072 4.072 8 O -0.541 6.541 9 Si 0.738 3.262 10 C -0.075 4.075 11 C -0.159 4.159 12 C 0.561 3.439 13 O -0.557 6.557 14 N -0.703 5.703 15 C 0.118 3.882 16 H 0.097 0.903 17 C -0.125 4.125 18 C -0.079 4.079 19 H 0.102 0.898 20 C -0.069 4.069 21 C -0.050 4.050 22 Cl -0.077 7.077 23 C -0.121 4.121 24 C -0.117 4.117 25 C -0.115 4.115 26 C -0.110 4.110 27 C -0.136 4.136 28 H 0.072 0.928 29 H 0.073 0.927 30 H 0.078 0.922 31 H 0.146 0.854 32 H 0.088 0.912 33 H 0.077 0.923 34 H 0.076 0.924 35 H 0.128 0.872 36 H 0.386 0.614 37 H -0.265 1.265 38 H -0.298 1.298 39 H 0.141 0.859 40 H 0.407 0.593 41 H 0.109 0.891 42 H 0.079 0.921 43 H 0.138 0.862 44 H 0.149 0.851 45 H 0.149 0.851 46 H 0.149 0.851 47 H 0.070 0.930 48 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.064 -1.939 1.137 2.248 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.024 4.024 3 C -0.153 4.153 4 C -0.028 4.028 5 C -0.183 4.183 6 C -0.134 4.134 7 C -0.182 4.182 8 O -0.349 6.349 9 Si 0.643 3.357 10 C -0.093 4.093 11 C -0.162 4.162 12 C 0.350 3.650 13 O -0.437 6.437 14 N -0.354 5.354 15 C 0.013 3.987 16 H 0.115 0.885 17 C -0.163 4.163 18 C -0.097 4.097 19 H 0.120 0.880 20 C -0.070 4.070 21 C -0.077 4.077 22 Cl -0.048 7.048 23 C -0.140 4.140 24 C -0.135 4.135 25 C -0.133 4.133 26 C -0.128 4.128 27 C -0.175 4.175 28 H 0.090 0.910 29 H 0.092 0.908 30 H 0.096 0.904 31 H 0.164 0.836 32 H 0.106 0.894 33 H 0.096 0.904 34 H 0.095 0.905 35 H 0.145 0.855 36 H 0.235 0.765 37 H -0.191 1.191 38 H -0.226 1.226 39 H 0.158 0.842 40 H 0.244 0.756 41 H 0.128 0.872 42 H 0.098 0.902 43 H 0.156 0.844 44 H 0.166 0.834 45 H 0.167 0.833 46 H 0.167 0.833 47 H 0.088 0.912 48 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 0.069 -2.075 1.280 2.439 hybrid contribution 0.658 0.167 -1.138 1.325 sum 0.727 -1.908 0.142 2.046 Atomic orbital electron populations 1.21031 0.90010 1.03218 1.03199 1.20226 0.97032 0.91886 0.93281 1.21205 0.93680 0.98008 1.02452 1.20227 0.93449 0.95849 0.93249 1.21012 1.00742 0.92888 1.03672 1.20061 0.96313 0.92653 1.04412 1.25036 0.91200 1.13622 0.88304 1.86579 1.76399 1.54925 1.16966 0.94324 0.77926 0.74014 0.89440 1.21287 0.92715 0.98325 0.96974 1.19638 0.93646 0.92830 1.10063 1.18410 0.86804 0.84185 0.75581 1.90735 1.14838 1.87473 1.50662 1.45582 1.10973 1.04910 1.73944 1.21869 0.97106 0.82163 0.97562 0.88535 1.23386 0.99607 0.97478 0.95783 1.21732 0.99482 0.90962 0.97556 0.88007 1.19687 0.91389 0.96241 0.99677 1.21040 0.87821 0.92417 1.06378 1.98359 1.39547 1.69883 1.97052 1.21294 1.00760 0.91661 1.00276 1.21443 0.91858 1.01053 0.99183 1.21599 0.98580 0.95353 0.97804 1.21260 0.98429 0.93717 0.99432 1.23577 0.97723 0.98881 0.97277 0.90979 0.90818 0.90382 0.83587 0.89362 0.90390 0.90516 0.85471 0.76484 1.19103 1.22618 0.84156 0.75610 0.87228 0.90199 0.84391 0.83360 0.83335 0.83347 0.91157 0.87560 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.52 8.73 71.24 0.62 0.10 16 2 C -0.02 -0.09 5.91 -19.61 -0.12 -0.21 16 3 C -0.14 -0.13 9.31 22.23 0.21 0.07 16 4 C -0.03 0.00 5.89 -19.81 -0.12 -0.12 16 5 C -0.13 0.34 9.31 71.23 0.66 1.01 16 6 C -0.13 0.11 5.26 -19.90 -0.10 0.01 16 7 C -0.07 0.17 1.88 71.24 0.13 0.30 16 8 O -0.54 -0.03 11.92 -148.98 -1.78 -1.81 16 9 Si 0.74 -2.22 30.23 68.60 2.07 -0.14 16 10 C -0.07 0.05 8.13 22.53 0.18 0.23 16 11 C -0.16 -0.55 5.87 -20.09 -0.12 -0.66 16 12 C 0.56 2.99 7.70 86.79 0.67 3.66 16 13 O -0.56 -6.30 12.96 -3.90 -0.05 -6.35 16 14 N -0.70 0.00 5.21 -442.90 -2.31 -2.31 16 15 C 0.12 -0.13 4.30 45.52 0.20 0.07 16 16 H 0.10 0.17 7.50 -2.39 -0.02 0.15 16 17 C -0.12 0.48 7.29 31.12 0.23 0.70 16 18 C -0.08 0.19 3.65 -10.95 -0.04 0.15 16 19 H 0.10 -0.19 6.57 -2.39 -0.02 -0.21 16 20 C -0.07 0.03 5.29 -19.84 -0.10 -0.07 16 21 C -0.05 -0.08 6.31 22.33 0.14 0.06 16 22 Cl -0.08 -0.15 27.16 -2.72 -0.07 -0.23 16 23 C -0.12 -0.03 9.83 22.29 0.22 0.19 16 24 C -0.12 0.26 10.05 22.26 0.22 0.49 16 25 C -0.12 0.37 10.05 22.27 0.22 0.60 16 26 C -0.11 0.30 8.62 22.27 0.19 0.49 16 27 C -0.14 0.31 7.27 31.18 0.23 0.54 16 28 H 0.07 0.38 8.14 -2.39 -0.02 0.36 16 29 H 0.07 0.06 8.04 -2.39 -0.02 0.04 16 30 H 0.08 0.65 5.85 -2.39 -0.01 0.64 16 31 H 0.15 -0.36 8.06 -2.91 -0.02 -0.38 16 32 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 33 H 0.08 -0.08 6.18 -2.39 -0.01 -0.09 16 34 H 0.08 -0.29 8.08 -2.39 -0.02 -0.31 16 35 H 0.13 -0.50 7.38 -2.38 -0.02 -0.52 16 36 H 0.39 -1.96 8.70 -74.06 -0.64 -2.60 16 37 H -0.27 0.47 6.69 99.48 0.67 1.14 16 38 H -0.30 -1.48 7.11 99.48 0.71 -0.77 16 39 H 0.14 -0.63 3.25 -2.91 -0.01 -0.64 16 40 H 0.41 -1.52 6.78 -92.70 -0.63 -2.15 16 41 H 0.11 -0.59 7.73 -2.39 -0.02 -0.61 16 42 H 0.08 -0.31 8.14 -2.38 -0.02 -0.33 16 43 H 0.14 -0.24 8.06 -2.91 -0.02 -0.27 16 44 H 0.15 -0.93 8.06 -2.91 -0.02 -0.95 16 45 H 0.15 -1.11 8.06 -2.91 -0.02 -1.13 16 46 H 0.15 -0.96 6.65 -2.91 -0.02 -0.98 16 47 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 48 H 0.11 -0.45 6.31 -2.39 -0.02 -0.47 16 Total: 0.00 -14.94 395.76 1.14 -13.80 By element: Atomic # 1 Polarization: -10.31 SS G_CDS: -0.25 Total: -10.56 kcal Atomic # 6 Polarization: 4.07 SS G_CDS: 3.53 Total: 7.60 kcal Atomic # 7 Polarization: 0.00 SS G_CDS: -2.31 Total: -2.31 kcal Atomic # 8 Polarization: -6.33 SS G_CDS: -1.83 Total: -8.15 kcal Atomic # 14 Polarization: -2.22 SS G_CDS: 2.07 Total: -0.14 kcal Atomic # 17 Polarization: -0.15 SS G_CDS: -0.07 Total: -0.23 kcal Total: -14.94 1.14 -13.80 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.828 kcal (2) G-P(sol) polarization free energy of solvation -14.942 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.886 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.804 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.024 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds