Wall clock time and date at job start Sat Mar 6 2021 13:17:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47250 * 2 1 4 4 C 1.50705 * 109.47168 * 240.00437 * 2 1 3 5 5 C 1.34237 * 126.50548 * 105.26881 * 4 2 1 6 6 N 1.36833 * 109.93701 * 180.20643 * 5 4 2 7 7 C 1.46492 * 125.05993 * 179.81474 * 6 5 4 8 8 C 1.50703 * 109.47441 * 264.69804 * 7 6 5 9 9 O 1.21283 * 119.99488 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00290 * 180.02562 * 8 7 6 11 11 C 1.46498 * 119.99828 * 180.27728 * 10 8 7 12 12 H 1.09001 * 112.85160 * 25.05344 * 11 10 8 13 13 C 1.53784 * 113.61507 * 156.25317 * 11 10 8 14 14 C 1.53777 * 87.08269 * 89.11382 * 13 11 10 15 15 H 1.09007 * 113.61513 * 270.88559 * 14 13 11 16 16 C 1.50690 * 113.61484 * 139.98200 * 14 13 11 17 17 C 1.38334 * 120.00646 * 119.99792 * 16 14 13 18 18 Cl 1.73599 * 120.01348 * 0.02562 * 17 16 14 19 19 C 1.38373 * 119.97227 * 179.97438 * 17 16 14 20 20 C 1.38190 * 119.98966 * 0.02562 * 19 17 16 21 21 C 1.38261 * 120.01122 * 0.02562 * 20 19 17 22 22 C 1.38221 * 120.02811 * 359.71007 * 21 20 19 23 23 C 1.53781 * 113.61116 * 253.85697 * 11 10 8 24 24 C 1.37691 * 109.87438 * 359.55079 * 6 5 4 25 25 C 1.39085 * 133.51481 * 180.28253 * 24 6 5 26 26 C 1.37786 * 119.78149 * 179.97438 * 25 24 6 27 27 C 1.38788 * 120.66397 * 0.02562 * 26 25 24 28 28 C 1.36655 * 120.52877 * 359.95441 * 27 26 25 29 29 C 1.39589 * 119.76915 * 0.04683 * 28 27 26 30 30 H 0.96697 * 113.99724 * 59.99401 * 1 2 3 31 31 H 1.09003 * 109.47476 * 120.00022 * 2 1 3 32 32 H 1.48504 * 110.00006 * 60.00206 * 3 2 1 33 33 H 1.48503 * 110.00255 * 181.32147 * 3 2 1 34 34 H 1.08001 * 125.02710 * 0.04150 * 5 4 2 35 35 H 1.08998 * 109.47276 * 144.69720 * 7 6 5 36 36 H 1.09002 * 109.47526 * 24.70031 * 7 6 5 37 37 H 0.97001 * 119.99727 * 359.97438 * 10 8 7 38 38 H 1.08996 * 113.61507 * 203.66303 * 13 11 10 39 39 H 1.09008 * 113.60985 * 334.56259 * 13 11 10 40 40 H 1.08002 * 120.00520 * 179.97438 * 19 17 16 41 41 H 1.08005 * 119.99549 * 179.97438 * 20 19 17 42 42 H 1.08001 * 119.98693 * 179.97438 * 21 20 19 43 43 H 1.07992 * 119.99440 * 180.29649 * 22 21 20 44 44 H 1.08993 * 113.61427 * 25.43567 * 23 11 10 45 45 H 1.09003 * 113.61197 * 156.33752 * 23 11 10 46 46 H 1.08007 * 120.10703 * 359.95673 * 25 24 6 47 47 H 1.08004 * 119.66780 * 180.02562 * 26 25 24 48 48 H 1.08003 * 119.73283 * 179.97438 * 27 26 25 49 49 H 1.08002 * 120.11998 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7103 -1.2306 5 6 2.4655 -0.1379 -2.3210 6 7 2.8015 -1.0989 -3.2352 7 6 3.4054 -0.8402 -4.5446 8 6 2.3250 -0.7838 -5.5938 9 8 1.1649 -0.9444 -5.2787 10 7 2.6481 -0.5559 -6.8823 11 6 1.5973 -0.4950 -7.9012 12 1 0.6267 -0.2146 -7.4920 13 6 1.9955 0.3100 -9.1495 14 6 2.5502 -1.0043 -9.7237 15 1 3.5926 -1.1888 -9.4638 16 6 2.2710 -1.1864 -11.1933 17 6 3.3198 -1.3204 -12.0853 18 17 4.9579 -1.2795 -11.5121 19 6 3.0626 -1.4881 -13.4346 20 6 1.7584 -1.5211 -13.8902 21 6 0.7106 -1.3861 -12.9983 22 6 0.9667 -1.2240 -11.6497 23 6 1.5479 -1.7347 -8.8098 24 6 2.4931 -2.3456 -2.7388 25 6 2.6282 -3.6361 -3.2396 26 6 2.2154 -4.7107 -2.4824 27 6 1.6646 -4.5193 -1.2230 28 6 1.5229 -3.2601 -0.7113 29 6 1.9344 -2.1570 -1.4612 30 1 -0.3933 0.4418 -0.7650 31 1 1.7924 -0.5138 0.8900 32 1 1.5616 2.4679 1.2085 33 1 3.5347 1.7703 -0.0322 34 1 2.6063 0.9241 -2.4575 35 1 4.1052 -1.6400 -4.7864 36 1 3.9363 0.1114 -4.5183 37 1 3.5761 -0.4278 -7.1342 38 1 1.1443 0.7042 -9.7047 39 1 2.7621 1.0610 -8.9585 40 1 3.8810 -1.5923 -14.1315 41 1 1.5575 -1.6516 -14.9434 42 1 -0.3086 -1.4115 -13.3549 43 1 0.1478 -1.1234 -10.9530 44 1 1.9533 -2.6333 -8.3449 45 1 0.5745 -1.8985 -9.2724 46 1 3.0550 -3.7953 -4.2189 47 1 2.3216 -5.7121 -2.8729 48 1 1.3457 -5.3724 -0.6425 49 1 1.0931 -3.1187 0.2693 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:17:14 Heat of formation + Delta-G solvation = 52.691752 kcal Electronic energy + Delta-G solvation = -33496.139070 eV Core-core repulsion = 28996.111360 eV Total energy + Delta-G solvation = -4500.027710 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.123 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -42.49476 -41.67531 -40.41277 -38.97403 -37.96405 -37.48875 -37.46208 -34.79394 -33.97426 -32.05039 -31.80246 -31.23944 -30.11254 -28.96191 -26.92198 -26.49878 -25.56663 -23.94766 -23.61678 -22.93006 -22.52280 -21.83539 -20.58746 -20.30800 -18.85613 -18.43965 -18.21473 -17.65856 -17.32007 -17.03441 -16.64495 -16.53489 -16.30961 -16.26669 -15.89463 -15.49901 -15.44453 -15.15562 -15.03898 -14.91553 -14.71715 -14.60825 -14.56075 -14.29866 -13.95200 -13.85092 -13.62962 -13.50862 -13.26135 -13.10181 -12.82121 -12.59265 -12.56408 -12.44435 -12.30029 -12.10410 -12.00435 -11.91967 -11.66898 -11.63685 -11.41484 -11.11472 -10.41726 -10.26470 -10.20116 -9.95857 -9.69585 -9.01830 -8.52237 -5.00698 0.06490 0.16024 0.28400 0.79892 1.09283 1.36178 1.39112 1.40744 1.68243 1.73718 2.04049 2.08394 2.49743 3.11867 3.23180 3.39298 3.43236 3.47458 3.55735 3.66172 3.69433 3.76989 3.78849 3.81544 3.86537 3.91924 3.98295 4.09215 4.22481 4.24944 4.31874 4.37770 4.47229 4.53406 4.58426 4.58560 4.65184 4.71902 4.73477 4.79980 4.81472 4.84737 4.90979 4.94437 4.99290 5.15903 5.25739 5.26714 5.35250 5.43319 5.65226 5.70638 5.81396 5.86839 5.90586 6.14446 6.31266 6.37099 6.79150 6.98688 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.198 4.198 5 C 0.068 3.932 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.495 3.505 9 O -0.510 6.510 10 N -0.712 5.712 11 C 0.122 3.878 12 H 0.107 0.893 13 C -0.132 4.132 14 C -0.081 4.081 15 H 0.105 0.895 16 C -0.063 4.063 17 C -0.033 4.033 18 Cl -0.069 7.069 19 C -0.108 4.108 20 C -0.111 4.111 21 C -0.111 4.111 22 C -0.106 4.106 23 C -0.142 4.142 24 C 0.109 3.891 25 C -0.128 4.128 26 C -0.097 4.097 27 C -0.146 4.146 28 C -0.066 4.066 29 C -0.087 4.087 30 H 0.377 0.623 31 H 0.110 0.890 32 H -0.254 1.254 33 H -0.256 1.256 34 H 0.171 0.829 35 H 0.117 0.883 36 H 0.124 0.876 37 H 0.403 0.597 38 H 0.100 0.900 39 H 0.079 0.921 40 H 0.134 0.866 41 H 0.133 0.867 42 H 0.130 0.870 43 H 0.133 0.867 44 H 0.076 0.924 45 H 0.096 0.904 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.199 2.567 -6.200 7.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.584 3.416 4 C -0.205 4.205 5 C -0.056 4.056 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.278 3.722 9 O -0.383 6.383 10 N -0.365 5.365 11 C 0.017 3.983 12 H 0.125 0.875 13 C -0.170 4.170 14 C -0.099 4.099 15 H 0.123 0.877 16 C -0.063 4.063 17 C -0.060 4.060 18 Cl -0.040 7.040 19 C -0.127 4.127 20 C -0.129 4.129 21 C -0.129 4.129 22 C -0.124 4.124 23 C -0.180 4.180 24 C 0.004 3.996 25 C -0.148 4.148 26 C -0.116 4.116 27 C -0.165 4.165 28 C -0.084 4.084 29 C -0.091 4.091 30 H 0.225 0.775 31 H 0.127 0.873 32 H -0.179 1.179 33 H -0.180 1.180 34 H 0.188 0.812 35 H 0.135 0.865 36 H 0.141 0.859 37 H 0.237 0.763 38 H 0.118 0.882 39 H 0.098 0.902 40 H 0.151 0.849 41 H 0.150 0.850 42 H 0.148 0.852 43 H 0.151 0.849 44 H 0.094 0.906 45 H 0.115 0.885 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 2.206 2.834 -5.197 6.317 hybrid contribution 0.812 -0.619 -0.343 1.078 sum 3.018 2.214 -5.540 6.686 Atomic orbital electron populations 1.86489 1.17426 1.81824 1.48967 1.24327 0.84790 1.08732 0.96218 0.95252 0.80642 0.77879 0.87839 1.20648 1.09598 0.92409 0.97865 1.21505 1.01242 0.93779 0.89095 1.43183 1.53982 1.04653 1.13115 1.21583 0.94548 1.06042 0.81339 1.21000 0.90825 0.76983 0.83346 1.90817 1.19865 1.46889 1.80728 1.45635 1.10544 1.73632 1.06651 1.21837 0.92500 0.96737 0.87275 0.87535 1.23401 1.02090 0.96119 0.95404 1.21779 1.00790 0.97495 0.89826 0.87678 1.19539 0.92118 0.99828 0.94855 1.20858 0.85471 1.05631 0.94031 1.98370 1.19470 1.96919 1.89202 1.21110 0.97954 1.00028 0.93609 1.21183 0.91816 0.99486 1.00401 1.21303 0.99751 0.98665 0.93189 1.21016 0.95569 0.99892 0.95948 1.23607 0.99974 0.97989 0.96471 1.18162 1.01418 0.85835 0.94141 1.19953 1.05300 0.89285 1.00285 1.20823 0.98375 0.97950 0.94449 1.20668 1.02428 0.96944 0.96430 1.20305 0.97904 0.90956 0.99266 1.18944 1.03171 0.92815 0.94139 0.77548 0.87265 1.17893 1.18050 0.81213 0.86463 0.85851 0.76282 0.88180 0.90243 0.84855 0.84960 0.85180 0.84934 0.90573 0.88529 0.86764 0.85743 0.85945 0.85985 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.30 12.88 -35.23 -0.45 -1.75 16 2 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 3 Si 0.68 -0.31 30.75 -169.99 -5.23 -5.53 16 4 C -0.20 -0.49 5.58 -102.71 -0.57 -1.06 16 5 C 0.07 0.04 9.89 -16.73 -0.17 -0.12 16 6 N -0.47 -0.51 2.27 -115.71 -0.26 -0.77 16 7 C 0.09 -0.25 6.48 -5.20 -0.03 -0.28 16 8 C 0.49 -0.26 7.90 -10.98 -0.09 -0.35 16 9 O -0.51 -2.24 16.04 5.55 0.09 -2.15 16 10 N -0.71 2.17 5.26 -53.01 -0.28 1.89 16 11 C 0.12 -0.26 4.30 -67.12 -0.29 -0.55 16 12 H 0.11 -0.04 7.50 -51.93 -0.39 -0.43 16 13 C -0.13 0.42 7.29 -25.92 -0.19 0.23 16 14 C -0.08 0.19 3.65 -90.82 -0.33 -0.15 16 15 H 0.11 -0.25 6.58 -51.93 -0.34 -0.59 16 16 C -0.06 0.05 5.29 -104.59 -0.55 -0.50 16 17 C -0.03 0.00 6.31 -39.50 -0.25 -0.25 16 18 Cl -0.07 0.00 27.16 -51.86 -1.41 -1.41 16 19 C -0.11 0.04 9.83 -39.55 -0.39 -0.35 16 20 C -0.11 0.13 10.05 -39.59 -0.40 -0.26 16 21 C -0.11 0.17 10.05 -39.58 -0.40 -0.23 16 22 C -0.11 0.15 8.62 -39.59 -0.34 -0.19 16 23 C -0.14 0.28 7.27 -25.78 -0.19 0.09 16 24 C 0.11 0.38 6.80 -83.99 -0.57 -0.19 16 25 C -0.13 -0.35 10.00 -39.43 -0.39 -0.74 16 26 C -0.10 -0.24 10.01 -39.54 -0.40 -0.63 16 27 C -0.15 -0.42 9.97 -39.95 -0.40 -0.82 16 28 C -0.07 -0.26 10.05 -39.65 -0.40 -0.66 16 29 C -0.09 -0.38 6.35 -105.14 -0.67 -1.05 16 30 H 0.38 -0.42 8.70 45.56 0.40 -0.02 16 31 H 0.11 0.23 7.96 -51.93 -0.41 -0.18 16 32 H -0.25 -0.72 7.11 56.52 0.40 -0.31 16 33 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 34 H 0.17 -0.51 6.34 -52.49 -0.33 -0.84 16 35 H 0.12 -0.53 8.14 -51.93 -0.42 -0.96 16 36 H 0.12 -0.74 8.12 -51.93 -0.42 -1.17 16 37 H 0.40 -2.29 8.70 -40.82 -0.36 -2.65 16 38 H 0.10 -0.33 7.73 -51.93 -0.40 -0.73 16 39 H 0.08 -0.29 8.14 -51.92 -0.42 -0.71 16 40 H 0.13 -0.20 8.06 -52.49 -0.42 -0.63 16 41 H 0.13 -0.40 8.06 -52.48 -0.42 -0.82 16 42 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 43 H 0.13 -0.40 6.65 -52.49 -0.35 -0.75 16 44 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 45 H 0.10 -0.22 6.31 -51.93 -0.33 -0.55 16 46 H 0.11 0.09 8.06 -52.48 -0.42 -0.33 16 47 H 0.12 0.03 8.06 -52.48 -0.42 -0.39 16 48 H 0.12 0.12 8.06 -52.48 -0.42 -0.30 16 49 H 0.12 0.38 8.06 -52.49 -0.42 -0.05 16 LS Contribution 422.73 15.07 6.37 6.37 Total: 0.00 -10.66 422.73 -14.43 -25.09 By element: Atomic # 1 Polarization: -7.39 SS G_CDS: -6.36 Total: -13.75 kcal Atomic # 6 Polarization: -1.09 SS G_CDS: -6.90 Total: -7.99 kcal Atomic # 7 Polarization: 1.66 SS G_CDS: -0.54 Total: 1.12 kcal Atomic # 8 Polarization: -3.53 SS G_CDS: -0.36 Total: -3.90 kcal Atomic # 14 Polarization: -0.31 SS G_CDS: -5.23 Total: -5.53 kcal Atomic # 17 Polarization: 0.00 SS G_CDS: -1.41 Total: -1.41 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -10.66 -14.43 -25.09 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.780 kcal (2) G-P(sol) polarization free energy of solvation -10.657 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.123 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.431 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.088 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.692 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds