Wall clock time and date at job start Sat Mar 6 2021 13:17:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47250 * 2 1 4 4 C 1.50705 * 109.47168 * 240.00437 * 2 1 3 5 5 C 1.34237 * 126.50548 * 105.26881 * 4 2 1 6 6 N 1.36833 * 109.93701 * 180.20643 * 5 4 2 7 7 C 1.46492 * 125.05993 * 179.81474 * 6 5 4 8 8 C 1.50703 * 109.47441 * 264.69804 * 7 6 5 9 9 O 1.21283 * 119.99488 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00290 * 180.02562 * 8 7 6 11 11 C 1.46498 * 119.99828 * 180.27728 * 10 8 7 12 12 H 1.09001 * 112.85160 * 25.05344 * 11 10 8 13 13 C 1.53784 * 113.61507 * 156.25317 * 11 10 8 14 14 C 1.53777 * 87.08269 * 89.11382 * 13 11 10 15 15 H 1.09007 * 113.61513 * 270.88559 * 14 13 11 16 16 C 1.50690 * 113.61484 * 139.98200 * 14 13 11 17 17 C 1.38334 * 120.00646 * 119.99792 * 16 14 13 18 18 Cl 1.73599 * 120.01348 * 0.02562 * 17 16 14 19 19 C 1.38373 * 119.97227 * 179.97438 * 17 16 14 20 20 C 1.38190 * 119.98966 * 0.02562 * 19 17 16 21 21 C 1.38261 * 120.01122 * 0.02562 * 20 19 17 22 22 C 1.38221 * 120.02811 * 359.71007 * 21 20 19 23 23 C 1.53781 * 113.61116 * 253.85697 * 11 10 8 24 24 C 1.37691 * 109.87438 * 359.55079 * 6 5 4 25 25 C 1.39085 * 133.51481 * 180.28253 * 24 6 5 26 26 C 1.37786 * 119.78149 * 179.97438 * 25 24 6 27 27 C 1.38788 * 120.66397 * 0.02562 * 26 25 24 28 28 C 1.36655 * 120.52877 * 359.95441 * 27 26 25 29 29 C 1.39589 * 119.76915 * 0.04683 * 28 27 26 30 30 H 0.96697 * 113.99724 * 59.99401 * 1 2 3 31 31 H 1.09003 * 109.47476 * 120.00022 * 2 1 3 32 32 H 1.48504 * 110.00006 * 60.00206 * 3 2 1 33 33 H 1.48503 * 110.00255 * 181.32147 * 3 2 1 34 34 H 1.08001 * 125.02710 * 0.04150 * 5 4 2 35 35 H 1.08998 * 109.47276 * 144.69720 * 7 6 5 36 36 H 1.09002 * 109.47526 * 24.70031 * 7 6 5 37 37 H 0.97001 * 119.99727 * 359.97438 * 10 8 7 38 38 H 1.08996 * 113.61507 * 203.66303 * 13 11 10 39 39 H 1.09008 * 113.60985 * 334.56259 * 13 11 10 40 40 H 1.08002 * 120.00520 * 179.97438 * 19 17 16 41 41 H 1.08005 * 119.99549 * 179.97438 * 20 19 17 42 42 H 1.08001 * 119.98693 * 179.97438 * 21 20 19 43 43 H 1.07992 * 119.99440 * 180.29649 * 22 21 20 44 44 H 1.08993 * 113.61427 * 25.43567 * 23 11 10 45 45 H 1.09003 * 113.61197 * 156.33752 * 23 11 10 46 46 H 1.08007 * 120.10703 * 359.95673 * 25 24 6 47 47 H 1.08004 * 119.66780 * 180.02562 * 26 25 24 48 48 H 1.08003 * 119.73283 * 179.97438 * 27 26 25 49 49 H 1.08002 * 120.11998 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7103 -1.2306 5 6 2.4655 -0.1379 -2.3210 6 7 2.8015 -1.0989 -3.2352 7 6 3.4054 -0.8402 -4.5446 8 6 2.3250 -0.7838 -5.5938 9 8 1.1649 -0.9444 -5.2787 10 7 2.6481 -0.5559 -6.8823 11 6 1.5973 -0.4950 -7.9012 12 1 0.6267 -0.2146 -7.4920 13 6 1.9955 0.3100 -9.1495 14 6 2.5502 -1.0043 -9.7237 15 1 3.5926 -1.1888 -9.4638 16 6 2.2710 -1.1864 -11.1933 17 6 3.3198 -1.3204 -12.0853 18 17 4.9579 -1.2795 -11.5121 19 6 3.0626 -1.4881 -13.4346 20 6 1.7584 -1.5211 -13.8902 21 6 0.7106 -1.3861 -12.9983 22 6 0.9667 -1.2240 -11.6497 23 6 1.5479 -1.7347 -8.8098 24 6 2.4931 -2.3456 -2.7388 25 6 2.6282 -3.6361 -3.2396 26 6 2.2154 -4.7107 -2.4824 27 6 1.6646 -4.5193 -1.2230 28 6 1.5229 -3.2601 -0.7113 29 6 1.9344 -2.1570 -1.4612 30 1 -0.3933 0.4418 -0.7650 31 1 1.7924 -0.5138 0.8900 32 1 1.5616 2.4679 1.2085 33 1 3.5347 1.7703 -0.0322 34 1 2.6063 0.9241 -2.4575 35 1 4.1052 -1.6400 -4.7864 36 1 3.9363 0.1114 -4.5183 37 1 3.5761 -0.4278 -7.1342 38 1 1.1443 0.7042 -9.7047 39 1 2.7621 1.0610 -8.9585 40 1 3.8810 -1.5923 -14.1315 41 1 1.5575 -1.6516 -14.9434 42 1 -0.3086 -1.4115 -13.3549 43 1 0.1478 -1.1234 -10.9530 44 1 1.9533 -2.6333 -8.3449 45 1 0.5745 -1.8985 -9.2724 46 1 3.0550 -3.7953 -4.2189 47 1 2.3216 -5.7121 -2.8729 48 1 1.3457 -5.3724 -0.6425 49 1 1.0931 -3.1187 0.2693 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:17:12 Heat of formation + Delta-G solvation = 56.283958 kcal Electronic energy + Delta-G solvation = -33495.983300 eV Core-core repulsion = 28996.111360 eV Total energy + Delta-G solvation = -4499.871940 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.123 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -42.54001 -41.55107 -40.34546 -38.87859 -38.08631 -37.57432 -37.41058 -34.71734 -33.99147 -31.96391 -31.67116 -31.29340 -30.23732 -28.94569 -26.72927 -26.41098 -25.55841 -23.90027 -23.65575 -22.91409 -22.48563 -21.79112 -20.66347 -20.16251 -18.74867 -18.48832 -18.08573 -17.70934 -17.29932 -16.95410 -16.57149 -16.42414 -16.39609 -16.20125 -15.97489 -15.49726 -15.42777 -15.10439 -14.98021 -14.78190 -14.75667 -14.69313 -14.53639 -14.27974 -14.05310 -13.72995 -13.54174 -13.40031 -13.11627 -12.95623 -12.72844 -12.68890 -12.57477 -12.47561 -12.23693 -12.16321 -12.11218 -11.81266 -11.76209 -11.52830 -11.25595 -11.12786 -10.55811 -10.29799 -10.14042 -9.83768 -9.58273 -9.16411 -8.62995 -4.99274 0.13512 0.17862 0.28378 0.62396 1.16536 1.37281 1.40858 1.47174 1.68859 1.71219 2.00718 2.20327 2.62643 2.93524 3.41848 3.55578 3.59911 3.63207 3.67455 3.70976 3.76222 3.86575 3.88733 3.95520 4.04953 4.10725 4.16033 4.17740 4.20635 4.29425 4.38975 4.39957 4.47786 4.55593 4.63381 4.71115 4.72048 4.76059 4.77895 4.83252 4.88082 4.91267 4.98086 5.01188 5.12412 5.12931 5.29536 5.41488 5.49233 5.49454 5.59776 5.64872 5.72466 5.74846 5.86215 6.19907 6.23225 6.48398 6.83102 7.15135 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.564 6.564 2 C -0.047 4.047 3 Si 0.795 3.205 4 C -0.225 4.225 5 C 0.080 3.920 6 N -0.466 5.466 7 C 0.087 3.913 8 C 0.497 3.503 9 O -0.566 6.566 10 N -0.696 5.696 11 C 0.122 3.878 12 H 0.088 0.912 13 C -0.120 4.120 14 C -0.075 4.075 15 H 0.107 0.893 16 C -0.070 4.070 17 C -0.050 4.050 18 Cl -0.073 7.073 19 C -0.122 4.122 20 C -0.118 4.118 21 C -0.117 4.117 22 C -0.112 4.112 23 C -0.141 4.141 24 C 0.090 3.910 25 C -0.133 4.133 26 C -0.109 4.109 27 C -0.154 4.154 28 C -0.091 4.091 29 C -0.117 4.117 30 H 0.391 0.609 31 H 0.091 0.909 32 H -0.301 1.301 33 H -0.275 1.275 34 H 0.209 0.791 35 H 0.140 0.860 36 H 0.166 0.834 37 H 0.418 0.582 38 H 0.103 0.897 39 H 0.090 0.910 40 H 0.138 0.862 41 H 0.148 0.852 42 H 0.147 0.853 43 H 0.146 0.854 44 H 0.065 0.935 45 H 0.098 0.902 46 H 0.132 0.868 47 H 0.145 0.855 48 H 0.135 0.865 49 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.271 3.778 -7.851 9.307 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.156 4.156 3 Si 0.699 3.301 4 C -0.233 4.233 5 C -0.045 4.045 6 N -0.148 5.148 7 C -0.038 4.038 8 C 0.282 3.718 9 O -0.443 6.443 10 N -0.349 5.349 11 C 0.016 3.984 12 H 0.106 0.894 13 C -0.158 4.158 14 C -0.093 4.093 15 H 0.125 0.875 16 C -0.071 4.071 17 C -0.076 4.076 18 Cl -0.044 7.044 19 C -0.141 4.141 20 C -0.136 4.136 21 C -0.135 4.135 22 C -0.130 4.130 23 C -0.180 4.180 24 C -0.015 4.015 25 C -0.154 4.154 26 C -0.128 4.128 27 C -0.173 4.173 28 C -0.109 4.109 29 C -0.122 4.122 30 H 0.240 0.760 31 H 0.109 0.891 32 H -0.229 1.229 33 H -0.201 1.201 34 H 0.226 0.774 35 H 0.157 0.843 36 H 0.184 0.816 37 H 0.256 0.744 38 H 0.121 0.879 39 H 0.108 0.892 40 H 0.156 0.844 41 H 0.166 0.834 42 H 0.165 0.835 43 H 0.164 0.836 44 H 0.084 0.916 45 H 0.116 0.884 46 H 0.150 0.850 47 H 0.162 0.838 48 H 0.153 0.847 49 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 3.310 4.023 -6.912 8.655 hybrid contribution 0.440 -1.041 0.134 1.138 sum 3.749 2.981 -6.777 8.299 Atomic orbital electron populations 1.86440 1.18288 1.82423 1.50005 1.24696 0.84401 1.10995 0.95476 0.93987 0.77453 0.73536 0.85147 1.20800 1.11473 0.91854 0.99132 1.22086 0.99045 0.95291 0.88076 1.43431 1.53354 1.03787 1.14269 1.21985 0.93842 1.09158 0.78809 1.21363 0.90444 0.75833 0.84132 1.90806 1.22176 1.49705 1.81619 1.45515 1.11259 1.72296 1.05847 1.21762 0.92110 0.96976 0.87551 0.89420 1.23341 1.02349 0.95825 0.94291 1.21743 1.00702 0.97899 0.88998 0.87515 1.19723 0.92204 0.99742 0.95407 1.21032 0.85507 1.06577 0.94500 1.98359 1.19832 1.97003 1.89252 1.21301 0.98633 1.00388 0.93735 1.21437 0.91596 0.99197 1.01380 1.21591 1.00599 0.98071 0.93225 1.21250 0.95786 0.99585 0.96412 1.23595 1.00179 0.97594 0.96600 1.18383 1.01809 0.87077 0.94201 1.20243 1.04968 0.89200 1.00965 1.21118 0.98334 0.99042 0.94307 1.20904 1.02366 0.97001 0.97017 1.20440 0.99174 0.91837 0.99498 1.19378 1.03750 0.93977 0.95052 0.76008 0.89109 1.22926 1.20091 0.77416 0.84251 0.81619 0.74402 0.87897 0.89169 0.84375 0.83443 0.83523 0.83621 0.91630 0.88397 0.85003 0.83767 0.84687 0.86611 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.66 12.88 -148.98 -1.92 -5.58 16 2 C -0.05 -0.21 3.06 71.24 0.22 0.01 16 3 Si 0.79 -1.02 30.75 68.60 2.11 1.09 16 4 C -0.23 -1.31 5.58 -18.62 -0.10 -1.42 16 5 C 0.08 0.02 9.89 83.00 0.82 0.85 16 6 N -0.47 -0.61 2.27 -520.00 -1.18 -1.79 16 7 C 0.09 -0.66 6.48 85.64 0.56 -0.10 16 8 C 0.50 -1.05 7.90 87.66 0.69 -0.36 16 9 O -0.57 -5.16 16.04 -3.04 -0.05 -5.21 16 10 N -0.70 5.16 5.26 -440.03 -2.32 2.84 16 11 C 0.12 -0.58 4.30 45.52 0.20 -0.38 16 12 H 0.09 -0.02 7.50 -2.39 -0.02 -0.04 16 13 C -0.12 0.90 7.29 31.12 0.23 1.12 16 14 C -0.08 0.39 3.65 -10.93 -0.04 0.35 16 15 H 0.11 -0.59 6.58 -2.38 -0.02 -0.61 16 16 C -0.07 0.14 5.29 -19.84 -0.11 0.04 16 17 C -0.05 0.00 6.31 22.32 0.14 0.14 16 18 Cl -0.07 0.02 27.16 -2.72 -0.07 -0.06 16 19 C -0.12 0.10 9.83 22.29 0.22 0.32 16 20 C -0.12 0.33 10.05 22.26 0.22 0.56 16 21 C -0.12 0.43 10.05 22.27 0.22 0.65 16 22 C -0.11 0.38 8.62 22.27 0.19 0.57 16 23 C -0.14 0.58 7.27 31.21 0.23 0.81 16 24 C 0.09 0.69 6.80 39.03 0.27 0.95 16 25 C -0.13 -0.79 10.00 22.37 0.22 -0.56 16 26 C -0.11 -0.63 10.01 22.29 0.22 -0.41 16 27 C -0.15 -1.18 9.97 22.03 0.22 -0.96 16 28 C -0.09 -0.97 10.05 22.23 0.22 -0.75 16 29 C -0.12 -1.24 6.35 -20.20 -0.13 -1.37 16 30 H 0.39 -0.42 8.70 -74.06 -0.64 -1.07 16 31 H 0.09 0.63 7.96 -2.39 -0.02 0.61 16 32 H -0.30 -1.94 7.11 99.48 0.71 -1.23 16 33 H -0.27 -0.51 7.11 99.48 0.71 0.20 16 34 H 0.21 -1.83 6.34 -2.91 -0.02 -1.85 16 35 H 0.14 -1.64 8.14 -2.39 -0.02 -1.66 16 36 H 0.17 -2.68 8.12 -2.39 -0.02 -2.70 16 37 H 0.42 -5.69 8.70 -92.71 -0.81 -6.50 16 38 H 0.10 -0.78 7.73 -2.39 -0.02 -0.80 16 39 H 0.09 -0.83 8.14 -2.38 -0.02 -0.85 16 40 H 0.14 -0.38 8.06 -2.91 -0.02 -0.41 16 41 H 0.15 -0.99 8.06 -2.91 -0.02 -1.01 16 42 H 0.15 -1.11 8.06 -2.91 -0.02 -1.14 16 43 H 0.15 -0.98 6.65 -2.91 -0.02 -1.00 16 44 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 45 H 0.10 -0.44 6.31 -2.39 -0.02 -0.45 16 46 H 0.13 0.15 8.06 -2.91 -0.02 0.13 16 47 H 0.14 0.10 8.06 -2.91 -0.02 0.07 16 48 H 0.14 0.49 8.06 -2.91 -0.02 0.46 16 49 H 0.12 1.16 8.06 -2.91 -0.02 1.14 16 Total: 0.00 -28.38 422.73 0.88 -27.49 By element: Atomic # 1 Polarization: -18.44 SS G_CDS: -0.40 Total: -18.84 kcal Atomic # 6 Polarization: -4.66 SS G_CDS: 4.71 Total: 0.06 kcal Atomic # 7 Polarization: 4.55 SS G_CDS: -3.50 Total: 1.05 kcal Atomic # 8 Polarization: -8.82 SS G_CDS: -1.97 Total: -10.79 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: 2.11 Total: 1.09 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -0.07 Total: -0.06 kcal Total: -28.38 0.88 -27.49 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.778 kcal (2) G-P(sol) polarization free energy of solvation -28.377 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.401 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.494 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.284 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds