Wall clock time and date at job start Sat Mar 6 2021 13:17:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36770 * 125.79786 * 2 1 4 4 C 1.47259 * 126.94581 * 359.94630 * 3 2 1 5 5 O 1.21636 * 120.00038 * 359.97438 * 4 3 2 6 6 N 1.34772 * 120.00414 * 180.02562 * 4 3 2 7 7 C 1.46506 * 120.00033 * 180.02562 * 6 4 3 8 8 H 1.08992 * 112.90684 * 336.24748 * 7 6 4 9 9 C 1.54049 * 113.61276 * 107.61836 * 7 6 4 10 10 C 1.53781 * 87.08031 * 89.07129 * 9 7 6 11 11 H 1.09003 * 113.69043 * 270.86777 * 10 9 7 12 12 C 1.50698 * 113.61565 * 139.97986 * 10 9 7 13 13 C 1.38332 * 120.00854 * 142.50646 * 12 10 9 14 14 Cl 1.73594 * 120.01127 * 359.94815 * 13 12 10 15 15 C 1.38374 * 119.97338 * 179.97438 * 13 12 10 16 16 C 1.38193 * 119.98324 * 359.97438 * 15 13 12 17 17 C 1.38264 * 120.01906 * 0.02562 * 16 15 13 18 18 C 1.38215 * 120.02231 * 359.74155 * 17 16 15 19 19 C 1.53781 * 87.08070 * 25.42738 * 10 9 7 20 20 C 1.46691 * 106.11542 * 180.20637 * 3 2 1 21 21 C 1.34494 * 106.33123 * 359.62715 * 20 3 2 22 22 C 1.50696 * 125.57190 * 180.09086 * 21 20 3 23 23 O 1.42901 * 109.46983 * 300.31216 * 22 21 20 24 24 Si 1.86305 * 109.47066 * 180.30922 * 22 21 20 25 25 N 1.34658 * 125.80396 * 179.97438 * 2 1 3 26 26 H 1.09002 * 109.46739 * 90.00015 * 1 2 3 27 27 H 1.09001 * 109.46868 * 209.99323 * 1 2 3 28 28 H 1.08995 * 109.47412 * 329.99989 * 1 2 3 29 29 H 0.97002 * 120.00078 * 359.97438 * 6 4 3 30 30 H 1.09005 * 113.62125 * 334.52173 * 9 7 6 31 31 H 1.08996 * 113.68970 * 203.62749 * 9 7 6 32 32 H 1.08000 * 120.00680 * 179.97438 * 15 13 12 33 33 H 1.08003 * 119.99209 * 179.97438 * 16 15 13 34 34 H 1.08001 * 119.98524 * 180.02562 * 17 16 15 35 35 H 1.08001 * 119.99649 * 180.27415 * 18 17 16 36 36 H 1.09002 * 113.61445 * 89.11830 * 19 10 9 37 37 H 1.09002 * 113.61408 * 219.93560 * 19 10 9 38 38 H 1.07998 * 126.83595 * 179.75790 * 20 3 2 39 39 H 1.08996 * 109.47087 * 60.31026 * 22 21 20 40 40 H 0.96695 * 113.99763 * 180.02562 * 23 22 21 41 41 H 1.48497 * 109.99561 * 59.99923 * 24 22 21 42 42 H 1.48504 * 109.99690 * 181.31712 * 24 22 21 43 43 H 0.96999 * 124.85105 * 0.03391 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8702 2.5156 -0.0011 5 8 0.6838 2.7839 -0.0026 6 7 2.7848 3.5054 -0.0015 7 6 2.3501 4.9045 -0.0020 8 1 1.3467 5.0369 -0.4064 9 6 2.5750 5.6211 1.3430 10 6 3.9709 5.9978 0.8192 11 1 4.7377 5.2562 1.0432 12 6 4.3914 7.4003 1.1761 13 6 5.7085 7.6649 1.5060 14 17 6.8772 6.3813 1.5103 15 6 6.0939 8.9530 1.8330 16 6 5.1629 9.9743 1.8294 17 6 3.8466 9.7093 1.4996 18 6 3.4621 8.4237 1.1681 19 6 3.3870 5.8715 -0.5978 20 6 3.6882 0.6153 -0.0051 21 6 3.6096 -0.7274 0.0007 22 6 4.7820 -1.6741 0.0005 23 8 5.5757 -1.4491 -1.1664 24 14 4.1616 -3.4308 0.0004 25 7 2.2948 -1.0921 0.0005 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3633 -0.8901 0.5137 28 1 -0.3634 0.8899 0.5138 29 1 3.7310 3.2916 -0.0006 30 1 2.5973 4.9464 2.1989 31 1 1.9204 6.4788 1.4971 32 1 7.1219 9.1601 2.0911 33 1 5.4635 10.9797 2.0850 34 1 3.1196 10.5080 1.4965 35 1 2.4347 8.2180 0.9062 36 1 2.9538 6.7975 -0.9758 37 1 4.0653 5.4003 -1.3092 38 1 4.5890 1.2111 -0.0101 39 1 5.3876 -1.5027 0.8904 40 1 6.3494 -2.0253 -1.2328 41 1 3.3344 -3.6772 -1.2080 42 1 5.3080 -4.3743 0.0323 43 1 1.9735 -2.0073 0.0004 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:17:17 Heat of formation + Delta-G solvation = 22.854424 kcal Electronic energy + Delta-G solvation = -27169.289410 eV Core-core repulsion = 23208.183897 eV Total energy + Delta-G solvation = -3961.105513 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.108 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.42834 -41.40831 -39.97546 -38.58339 -37.92324 -37.35868 -34.44061 -32.85557 -32.32453 -31.69289 -31.38324 -29.01613 -26.69505 -26.52804 -25.36572 -23.91365 -23.32704 -22.41328 -21.42159 -20.61829 -19.98155 -18.78702 -18.36969 -18.05909 -17.07507 -16.98817 -16.53076 -16.31752 -16.25568 -15.85253 -15.34375 -15.28904 -14.91898 -14.85795 -14.72280 -14.59937 -14.53830 -14.17354 -14.11242 -13.64422 -13.47345 -13.42333 -13.28044 -12.96631 -12.93651 -12.66369 -12.53157 -12.43984 -12.17132 -12.14504 -11.68539 -11.48332 -11.20425 -10.81668 -10.54631 -9.96816 -9.85156 -9.72969 -9.57055 -9.07782 -5.26627 0.17891 0.27206 0.82675 0.97139 1.21591 1.28299 1.32629 1.68357 1.99273 2.43788 2.61005 2.70533 3.26029 3.46071 3.60835 3.63758 3.73502 3.84875 3.88964 3.96604 4.03814 4.13694 4.15169 4.22828 4.29841 4.35037 4.37083 4.55556 4.67673 4.71754 4.72807 4.74436 4.80794 4.89880 4.93099 4.96391 5.05555 5.06533 5.17248 5.27227 5.32836 5.43800 5.48094 5.73358 5.78658 5.81833 5.92646 6.24963 6.39705 6.76103 7.53296 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.126 3.874 3 C -0.242 4.242 4 C 0.598 3.402 5 O -0.547 6.547 6 N -0.710 5.710 7 C 0.125 3.875 8 H 0.107 0.893 9 C -0.142 4.142 10 C -0.082 4.082 11 H 0.105 0.895 12 C -0.060 4.060 13 C -0.034 4.034 14 Cl -0.068 7.068 15 C -0.109 4.109 16 C -0.112 4.112 17 C -0.112 4.112 18 C -0.106 4.106 19 C -0.135 4.135 20 C -0.126 4.126 21 C 0.017 3.983 22 C -0.042 4.042 23 O -0.531 6.531 24 Si 0.665 3.335 25 N -0.544 5.544 26 H 0.081 0.919 27 H 0.068 0.932 28 H 0.104 0.896 29 H 0.401 0.599 30 H 0.076 0.924 31 H 0.095 0.905 32 H 0.133 0.867 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.133 0.867 36 H 0.098 0.902 37 H 0.077 0.923 38 H 0.145 0.855 39 H 0.088 0.912 40 H 0.383 0.617 41 H -0.250 1.250 42 H -0.250 1.250 43 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.914 -1.534 2.257 2.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.008 3.992 3 C -0.251 4.251 4 C 0.388 3.612 5 O -0.426 6.426 6 N -0.361 5.361 7 C 0.019 3.981 8 H 0.125 0.875 9 C -0.181 4.181 10 C -0.100 4.100 11 H 0.123 0.877 12 C -0.061 4.061 13 C -0.060 4.060 14 Cl -0.039 7.039 15 C -0.128 4.128 16 C -0.131 4.131 17 C -0.130 4.130 18 C -0.124 4.124 19 C -0.173 4.173 20 C -0.150 4.150 21 C -0.090 4.090 22 C -0.152 4.152 23 O -0.338 6.338 24 Si 0.564 3.436 25 N -0.143 5.143 26 H 0.099 0.901 27 H 0.086 0.914 28 H 0.123 0.877 29 H 0.236 0.764 30 H 0.095 0.905 31 H 0.113 0.887 32 H 0.151 0.849 33 H 0.149 0.851 34 H 0.147 0.853 35 H 0.151 0.849 36 H 0.116 0.884 37 H 0.096 0.904 38 H 0.163 0.837 39 H 0.106 0.894 40 H 0.232 0.768 41 H -0.174 1.174 42 H -0.173 1.173 43 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -0.289 -1.935 1.716 2.602 hybrid contribution 1.895 -0.451 -0.571 2.030 sum 1.607 -2.386 1.145 3.096 Atomic orbital electron populations 1.20657 0.86444 1.04645 1.03876 1.20380 0.93763 0.85126 0.99977 1.20053 0.92992 0.91965 1.20115 1.17287 0.85190 0.83943 0.74827 1.90749 1.16544 1.84326 1.50965 1.45424 1.09779 1.04865 1.75998 1.21809 0.99497 0.80235 0.96567 0.87510 1.23613 0.95427 1.00823 0.98237 1.21735 0.97899 0.93153 0.97193 0.87691 1.19590 0.91379 0.96091 0.99029 1.20866 0.90326 0.89855 1.04987 1.98370 1.58009 1.50476 1.97081 1.21097 1.00734 0.90936 0.99989 1.21162 0.93078 0.99141 0.99679 1.21289 0.96368 0.96923 0.98397 1.21022 0.99520 0.92052 0.99834 1.23415 0.98068 1.00008 0.95776 1.21751 0.95658 0.92534 1.05092 1.19085 0.83272 0.94323 1.12367 1.23978 0.92722 1.07747 0.90802 1.86608 1.41667 1.62457 1.43062 0.95703 0.85683 0.74345 0.87833 1.41631 1.05359 1.08533 1.58814 0.90078 0.91359 0.87707 0.76450 0.90538 0.88713 0.84931 0.85056 0.85251 0.84893 0.88389 0.90384 0.83680 0.89410 0.76832 1.17419 1.17338 0.74724 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.02 9.88 36.01 0.36 0.33 16 2 C 0.13 0.21 7.17 -81.88 -0.59 -0.38 16 3 C -0.24 -0.68 6.29 -103.35 -0.65 -1.33 16 4 C 0.60 2.23 7.81 -12.60 -0.10 2.13 16 5 O -0.55 -3.48 14.41 5.25 0.08 -3.41 16 6 N -0.71 -0.83 5.26 -54.00 -0.28 -1.11 16 7 C 0.12 0.06 4.34 -66.97 -0.29 -0.23 16 8 H 0.11 0.19 7.46 -51.93 -0.39 -0.19 16 9 C -0.14 0.02 7.26 -25.78 -0.19 -0.17 16 10 C -0.08 0.02 3.64 -90.96 -0.33 -0.31 16 11 H 0.11 0.00 6.57 -51.93 -0.34 -0.34 16 12 C -0.06 -0.04 5.29 -104.59 -0.55 -0.59 16 13 C -0.03 -0.05 6.31 -39.50 -0.25 -0.30 16 14 Cl -0.07 -0.10 27.16 -51.86 -1.41 -1.50 16 15 C -0.11 -0.07 9.83 -39.55 -0.39 -0.46 16 16 C -0.11 0.03 10.05 -39.59 -0.40 -0.37 16 17 C -0.11 0.06 10.05 -39.58 -0.40 -0.34 16 18 C -0.11 0.03 8.60 -39.59 -0.34 -0.31 16 19 C -0.13 0.10 7.28 -25.92 -0.19 -0.09 16 20 C -0.13 -0.20 10.43 -37.49 -0.39 -0.59 16 21 C 0.02 0.01 6.14 -81.86 -0.50 -0.49 16 22 C -0.04 0.05 2.97 36.00 0.11 0.16 16 23 O -0.53 -0.06 12.84 -35.23 -0.45 -0.52 16 24 Si 0.66 -1.56 30.94 -169.99 -5.26 -6.82 16 25 N -0.54 0.04 5.41 -5.42 -0.03 0.01 16 26 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 27 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 28 H 0.10 0.21 6.47 -51.93 -0.34 -0.13 16 29 H 0.40 -0.19 7.82 -40.82 -0.32 -0.51 16 30 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 31 H 0.09 -0.09 6.32 -51.93 -0.33 -0.42 16 32 H 0.13 -0.07 8.06 -52.49 -0.42 -0.50 16 33 H 0.13 -0.28 8.06 -52.48 -0.42 -0.71 16 34 H 0.13 -0.31 8.06 -52.49 -0.42 -0.73 16 35 H 0.13 -0.25 6.68 -52.49 -0.35 -0.60 16 36 H 0.10 -0.13 7.71 -51.93 -0.40 -0.53 16 37 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 38 H 0.15 0.02 7.70 -52.49 -0.40 -0.39 16 39 H 0.09 -0.26 7.96 -51.93 -0.41 -0.67 16 40 H 0.38 -1.51 8.74 45.56 0.40 -1.12 16 41 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 42 H -0.25 0.06 7.11 56.52 0.40 0.46 16 43 H 0.41 -1.11 6.70 -40.82 -0.27 -1.38 16 LS Contribution 370.47 15.07 5.58 5.58 Total: 0.00 -8.28 370.47 -12.18 -20.46 By element: Atomic # 1 Polarization: -4.03 SS G_CDS: -5.31 Total: -9.34 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -5.09 Total: -3.34 kcal Atomic # 7 Polarization: -0.79 SS G_CDS: -0.31 Total: -1.11 kcal Atomic # 8 Polarization: -3.55 SS G_CDS: -0.38 Total: -3.93 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.26 Total: -6.82 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -1.41 Total: -1.50 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -8.28 -12.18 -20.46 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.312 kcal (2) G-P(sol) polarization free energy of solvation -8.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.035 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.181 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.457 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.854 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds