Wall clock time and date at job start Sat Mar 6 2021 13:17:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36770 * 125.79786 * 2 1 4 4 C 1.47259 * 126.94581 * 359.94630 * 3 2 1 5 5 O 1.21636 * 120.00038 * 359.97438 * 4 3 2 6 6 N 1.34772 * 120.00414 * 180.02562 * 4 3 2 7 7 C 1.46506 * 120.00033 * 180.02562 * 6 4 3 8 8 H 1.08992 * 112.90684 * 336.24748 * 7 6 4 9 9 C 1.54049 * 113.61276 * 107.61836 * 7 6 4 10 10 C 1.53781 * 87.08031 * 89.07129 * 9 7 6 11 11 H 1.09003 * 113.69043 * 270.86777 * 10 9 7 12 12 C 1.50698 * 113.61565 * 139.97986 * 10 9 7 13 13 C 1.38332 * 120.00854 * 142.50646 * 12 10 9 14 14 Cl 1.73594 * 120.01127 * 359.94815 * 13 12 10 15 15 C 1.38374 * 119.97338 * 179.97438 * 13 12 10 16 16 C 1.38193 * 119.98324 * 359.97438 * 15 13 12 17 17 C 1.38264 * 120.01906 * 0.02562 * 16 15 13 18 18 C 1.38215 * 120.02231 * 359.74155 * 17 16 15 19 19 C 1.53781 * 87.08070 * 25.42738 * 10 9 7 20 20 C 1.46691 * 106.11542 * 180.20637 * 3 2 1 21 21 C 1.34494 * 106.33123 * 359.62715 * 20 3 2 22 22 C 1.50696 * 125.57190 * 180.09086 * 21 20 3 23 23 O 1.42901 * 109.46983 * 300.31216 * 22 21 20 24 24 Si 1.86305 * 109.47066 * 180.30922 * 22 21 20 25 25 N 1.34658 * 125.80396 * 179.97438 * 2 1 3 26 26 H 1.09002 * 109.46739 * 90.00015 * 1 2 3 27 27 H 1.09001 * 109.46868 * 209.99323 * 1 2 3 28 28 H 1.08995 * 109.47412 * 329.99989 * 1 2 3 29 29 H 0.97002 * 120.00078 * 359.97438 * 6 4 3 30 30 H 1.09005 * 113.62125 * 334.52173 * 9 7 6 31 31 H 1.08996 * 113.68970 * 203.62749 * 9 7 6 32 32 H 1.08000 * 120.00680 * 179.97438 * 15 13 12 33 33 H 1.08003 * 119.99209 * 179.97438 * 16 15 13 34 34 H 1.08001 * 119.98524 * 180.02562 * 17 16 15 35 35 H 1.08001 * 119.99649 * 180.27415 * 18 17 16 36 36 H 1.09002 * 113.61445 * 89.11830 * 19 10 9 37 37 H 1.09002 * 113.61408 * 219.93560 * 19 10 9 38 38 H 1.07998 * 126.83595 * 179.75790 * 20 3 2 39 39 H 1.08996 * 109.47087 * 60.31026 * 22 21 20 40 40 H 0.96695 * 113.99763 * 180.02562 * 23 22 21 41 41 H 1.48497 * 109.99561 * 59.99923 * 24 22 21 42 42 H 1.48504 * 109.99690 * 181.31712 * 24 22 21 43 43 H 0.96999 * 124.85105 * 0.03391 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8702 2.5156 -0.0011 5 8 0.6838 2.7839 -0.0026 6 7 2.7848 3.5054 -0.0015 7 6 2.3501 4.9045 -0.0020 8 1 1.3467 5.0369 -0.4064 9 6 2.5750 5.6211 1.3430 10 6 3.9709 5.9978 0.8192 11 1 4.7377 5.2562 1.0432 12 6 4.3914 7.4003 1.1761 13 6 5.7085 7.6649 1.5060 14 17 6.8772 6.3813 1.5103 15 6 6.0939 8.9530 1.8330 16 6 5.1629 9.9743 1.8294 17 6 3.8466 9.7093 1.4996 18 6 3.4621 8.4237 1.1681 19 6 3.3870 5.8715 -0.5978 20 6 3.6882 0.6153 -0.0051 21 6 3.6096 -0.7274 0.0007 22 6 4.7820 -1.6741 0.0005 23 8 5.5757 -1.4491 -1.1664 24 14 4.1616 -3.4308 0.0004 25 7 2.2948 -1.0921 0.0005 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3633 -0.8901 0.5137 28 1 -0.3634 0.8899 0.5138 29 1 3.7310 3.2916 -0.0006 30 1 2.5973 4.9464 2.1989 31 1 1.9204 6.4788 1.4971 32 1 7.1219 9.1601 2.0911 33 1 5.4635 10.9797 2.0850 34 1 3.1196 10.5080 1.4965 35 1 2.4347 8.2180 0.9062 36 1 2.9538 6.7975 -0.9758 37 1 4.0653 5.4003 -1.3092 38 1 4.5890 1.2111 -0.0101 39 1 5.3876 -1.5027 0.8904 40 1 6.3494 -2.0253 -1.2328 41 1 3.3344 -3.6772 -1.2080 42 1 5.3080 -4.3743 0.0323 43 1 1.9735 -2.0073 0.0004 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:17:16 Heat of formation + Delta-G solvation = 25.952501 kcal Electronic energy + Delta-G solvation = -27169.155067 eV Core-core repulsion = 23208.183897 eV Total energy + Delta-G solvation = -3960.971171 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.108 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.49126 -41.44061 -40.08215 -38.68526 -37.87082 -37.40368 -34.59590 -32.89792 -32.37555 -31.65822 -31.41354 -28.99824 -26.70026 -26.56754 -25.39513 -23.92081 -23.35725 -22.44496 -21.46076 -20.76518 -20.01860 -18.72962 -18.37331 -18.07038 -17.14909 -17.03842 -16.58395 -16.33998 -16.28628 -15.89510 -15.36008 -15.30655 -14.98202 -14.86337 -14.72848 -14.66218 -14.57116 -14.27016 -14.08353 -13.69515 -13.47326 -13.42405 -13.33241 -12.93887 -12.91861 -12.66707 -12.54407 -12.46534 -12.15275 -12.12458 -11.72566 -11.50817 -11.23435 -10.95507 -10.57600 -10.13431 -9.85458 -9.78958 -9.57066 -9.15173 -5.08791 0.19171 0.29917 0.68304 1.07529 1.17879 1.26966 1.45708 1.79365 1.99418 2.35713 2.50164 2.64421 3.39368 3.44512 3.61719 3.67879 3.71006 3.87240 3.88974 3.97486 4.07307 4.11841 4.18871 4.22365 4.40697 4.41406 4.43239 4.51589 4.66148 4.72317 4.73463 4.75654 4.76668 4.86524 4.93028 5.00081 5.03091 5.03928 5.15459 5.27840 5.31176 5.46504 5.50731 5.65641 5.69404 5.85412 5.87980 6.38852 6.55862 6.63076 7.32943 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.120 3.880 3 C -0.266 4.266 4 C 0.592 3.408 5 O -0.582 6.582 6 N -0.701 5.701 7 C 0.120 3.880 8 H 0.093 0.907 9 C -0.136 4.136 10 C -0.075 4.075 11 H 0.100 0.900 12 C -0.070 4.070 13 C -0.051 4.051 14 Cl -0.077 7.077 15 C -0.121 4.121 16 C -0.117 4.117 17 C -0.115 4.115 18 C -0.111 4.111 19 C -0.124 4.124 20 C -0.139 4.139 21 C 0.014 3.986 22 C -0.053 4.053 23 O -0.554 6.554 24 Si 0.753 3.247 25 N -0.535 5.535 26 H 0.081 0.919 27 H 0.095 0.905 28 H 0.085 0.915 29 H 0.409 0.591 30 H 0.065 0.935 31 H 0.105 0.895 32 H 0.139 0.861 33 H 0.150 0.850 34 H 0.150 0.850 35 H 0.148 0.852 36 H 0.108 0.892 37 H 0.079 0.921 38 H 0.154 0.846 39 H 0.110 0.890 40 H 0.399 0.601 41 H -0.292 1.292 42 H -0.275 1.275 43 H 0.426 0.574 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.200 -1.557 2.596 3.257 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.000 4.000 3 C -0.276 4.276 4 C 0.382 3.618 5 O -0.464 6.464 6 N -0.351 5.351 7 C 0.014 3.986 8 H 0.111 0.889 9 C -0.175 4.175 10 C -0.094 4.094 11 H 0.119 0.881 12 C -0.070 4.070 13 C -0.077 4.077 14 Cl -0.048 7.048 15 C -0.140 4.140 16 C -0.135 4.135 17 C -0.133 4.133 18 C -0.129 4.129 19 C -0.162 4.162 20 C -0.163 4.163 21 C -0.095 4.095 22 C -0.162 4.162 23 O -0.364 6.364 24 Si 0.656 3.344 25 N -0.136 5.136 26 H 0.099 0.901 27 H 0.113 0.887 28 H 0.103 0.897 29 H 0.245 0.755 30 H 0.084 0.916 31 H 0.123 0.877 32 H 0.157 0.843 33 H 0.167 0.833 34 H 0.167 0.833 35 H 0.166 0.834 36 H 0.126 0.874 37 H 0.097 0.903 38 H 0.172 0.828 39 H 0.128 0.872 40 H 0.250 0.750 41 H -0.219 1.219 42 H -0.201 1.201 43 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges 0.042 -1.953 2.072 2.848 hybrid contribution 1.834 -0.431 -0.698 2.010 sum 1.876 -2.385 1.374 3.331 Atomic orbital electron populations 1.20630 0.85714 1.04986 1.03967 1.20594 0.94418 0.85385 0.99563 1.20178 0.94025 0.91840 1.21560 1.17542 0.84990 0.84777 0.74457 1.90720 1.17861 1.84894 1.52896 1.45379 1.09910 1.04868 1.74986 1.21852 0.99247 0.80135 0.97364 0.88904 1.23587 0.95819 1.00789 0.97299 1.21647 0.97510 0.92889 0.97330 0.88149 1.19713 0.91405 0.96550 0.99379 1.21050 0.90589 0.90057 1.06045 1.98359 1.58346 1.50881 1.97181 1.21296 1.01448 0.90995 1.00252 1.21447 0.93109 0.99777 0.99191 1.21599 0.96747 0.97369 0.97591 1.21261 1.00079 0.92049 0.99532 1.23372 0.97383 0.99871 0.95559 1.21930 0.95479 0.93218 1.05707 1.19449 0.84009 0.94578 1.11430 1.24271 0.92449 1.08131 0.91334 1.86556 1.42705 1.63533 1.43634 0.94681 0.82718 0.71709 0.85301 1.41631 1.05061 1.08870 1.57994 0.90057 0.88670 0.89659 0.75529 0.91638 0.87668 0.84326 0.83253 0.83263 0.83430 0.87411 0.90279 0.82823 0.87236 0.74953 1.21926 1.20081 0.73277 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.12 9.88 71.24 0.70 0.59 16 2 C 0.12 0.48 7.17 41.78 0.30 0.78 16 3 C -0.27 -1.83 6.29 -19.04 -0.12 -1.95 16 4 C 0.59 5.50 7.81 86.62 0.68 6.18 16 5 O -0.58 -8.75 14.41 -4.14 -0.06 -8.81 16 6 N -0.70 -2.64 5.26 -443.01 -2.33 -4.98 16 7 C 0.12 0.26 4.34 45.61 0.20 0.46 16 8 H 0.09 0.49 7.46 -2.39 -0.02 0.47 16 9 C -0.14 -0.07 7.26 31.21 0.23 0.16 16 10 C -0.08 0.00 3.64 -11.01 -0.04 -0.04 16 11 H 0.10 0.09 6.57 -2.39 -0.02 0.08 16 12 C -0.07 -0.10 5.29 -19.84 -0.10 -0.20 16 13 C -0.05 -0.16 6.31 22.32 0.14 -0.02 16 14 Cl -0.08 -0.27 27.16 -2.72 -0.07 -0.34 16 15 C -0.12 -0.17 9.83 22.29 0.22 0.05 16 16 C -0.12 0.14 10.05 22.27 0.22 0.36 16 17 C -0.12 0.23 10.05 22.27 0.22 0.46 16 18 C -0.11 0.12 8.60 22.26 0.19 0.31 16 19 C -0.12 0.14 7.28 31.12 0.23 0.37 16 20 C -0.14 -0.53 10.43 23.62 0.25 -0.28 16 21 C 0.01 0.02 6.14 40.98 0.25 0.27 16 22 C -0.05 0.17 2.97 71.23 0.21 0.38 16 23 O -0.55 0.11 12.84 -148.98 -1.91 -1.80 16 24 Si 0.75 -4.06 30.94 68.60 2.12 -1.94 16 25 N -0.54 0.10 5.41 -171.07 -0.93 -0.82 16 26 H 0.08 0.09 8.14 -2.39 -0.02 0.07 16 27 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 28 H 0.08 0.50 6.47 -2.39 -0.02 0.48 16 29 H 0.41 0.11 7.82 -92.71 -0.73 -0.62 16 30 H 0.06 0.19 8.14 -2.38 -0.02 0.17 16 31 H 0.11 -0.18 6.32 -2.39 -0.02 -0.20 16 32 H 0.14 -0.11 8.06 -2.91 -0.02 -0.13 16 33 H 0.15 -0.82 8.06 -2.91 -0.02 -0.84 16 34 H 0.15 -0.96 8.06 -2.91 -0.02 -0.99 16 35 H 0.15 -0.69 6.68 -2.91 -0.02 -0.71 16 36 H 0.11 -0.31 7.71 -2.39 -0.02 -0.33 16 37 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 38 H 0.15 0.13 7.70 -2.91 -0.02 0.11 16 39 H 0.11 -0.81 7.96 -2.39 -0.02 -0.83 16 40 H 0.40 -3.39 8.74 -74.06 -0.65 -4.04 16 41 H -0.29 -0.49 7.11 99.48 0.71 0.22 16 42 H -0.28 0.30 7.11 99.48 0.71 1.01 16 43 H 0.43 -2.51 6.70 -92.71 -0.62 -3.13 16 Total: 0.00 -20.36 370.47 -0.28 -20.64 By element: Atomic # 1 Polarization: -8.92 SS G_CDS: -0.87 Total: -9.80 kcal Atomic # 6 Polarization: 4.08 SS G_CDS: 3.77 Total: 7.86 kcal Atomic # 7 Polarization: -2.54 SS G_CDS: -3.26 Total: -5.80 kcal Atomic # 8 Polarization: -8.65 SS G_CDS: -1.97 Total: -10.62 kcal Atomic # 14 Polarization: -4.06 SS G_CDS: 2.12 Total: -1.94 kcal Atomic # 17 Polarization: -0.27 SS G_CDS: -0.07 Total: -0.34 kcal Total: -20.36 -0.28 -20.64 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.589 kcal (2) G-P(sol) polarization free energy of solvation -20.361 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.229 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.276 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.637 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.953 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds