Wall clock time and date at job start Sat Mar 6 2021 14:37:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35901 * 117.00336 * 2 1 4 4 C 1.38707 * 120.05613 * 179.72945 * 3 2 1 5 5 C 1.38171 * 119.93979 * 179.76882 * 4 3 2 6 6 C 1.50702 * 119.96847 * 180.22690 * 5 4 3 7 7 H 1.09008 * 112.85106 * 350.59032 * 6 5 4 8 8 C 1.53782 * 113.61088 * 121.78024 * 6 5 4 9 9 C 1.53790 * 87.07929 * 139.98135 * 8 6 5 10 10 H 1.08998 * 113.61295 * 220.01940 * 9 8 6 11 11 N 1.46501 * 113.60955 * 89.20161 * 9 8 6 12 12 C 1.34775 * 119.99515 * 155.00223 * 11 9 8 13 13 O 1.21694 * 120.00296 * 359.97438 * 12 11 9 14 14 C 1.46681 * 120.00123 * 179.97438 * 12 11 9 15 15 C 1.37874 * 126.23732 * 179.71290 * 14 12 11 16 16 C 1.39829 * 107.08272 * 179.85036 * 15 14 12 17 17 C 1.50708 * 126.06493 * 180.16182 * 16 15 14 18 18 O 1.42893 * 109.47189 * 65.27625 * 17 16 15 19 19 Si 1.86304 * 109.47090 * 185.27999 * 17 16 15 20 20 C 1.35452 * 107.87080 * 0.41832 * 16 15 14 21 21 N 1.35531 * 108.86722 * 359.74174 * 20 16 15 22 22 C 1.53772 * 113.61414 * 219.38919 * 6 5 4 23 23 C 1.38236 * 120.05797 * 0.48328 * 5 4 3 24 24 C 1.38285 * 120.11138 * 359.77034 * 23 5 4 25 25 C 1.38122 * 120.05743 * 359.97438 * 24 23 5 26 26 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.46938 * 59.99705 * 1 2 3 28 28 H 1.09004 * 109.46926 * 299.99826 * 1 2 3 29 29 H 1.07994 * 120.02905 * 359.97438 * 4 3 2 30 30 H 1.08996 * 113.61629 * 254.53023 * 8 6 5 31 31 H 1.09000 * 113.61245 * 25.35679 * 8 6 5 32 32 H 0.96994 * 120.00390 * 334.99702 * 11 9 8 33 33 H 1.07997 * 126.45545 * 0.02562 * 15 14 12 34 34 H 1.08998 * 109.46865 * 305.27818 * 17 16 15 35 35 H 0.96705 * 113.99819 * 60.00575 * 18 17 16 36 36 H 1.48498 * 109.99755 * 179.97438 * 19 17 16 37 37 H 1.48498 * 109.99957 * 301.31811 * 19 17 16 38 38 H 1.08002 * 125.56910 * 179.71905 * 20 16 15 39 39 H 0.97008 * 125.67540 * 180.02562 * 21 20 16 40 40 H 1.09002 * 113.61843 * 334.56863 * 22 6 5 41 41 H 1.09004 * 113.61734 * 105.47682 * 22 6 5 42 42 H 1.07995 * 119.94519 * 179.74365 * 23 5 4 43 43 H 1.08002 * 119.97132 * 179.97438 * 24 23 5 44 44 H 1.08002 * 120.03161 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2108 0.0000 4 6 3.4312 1.2847 0.0057 5 6 4.0560 2.5170 0.0008 6 6 5.5609 2.5980 0.0018 7 1 6.0367 1.6319 0.1707 8 6 6.1371 3.3669 -1.1989 9 6 7.1514 3.9803 -0.2190 10 1 7.3469 5.0375 -0.3979 11 7 8.3774 3.1916 -0.0734 12 6 9.5217 3.7900 0.3124 13 8 9.5366 4.9855 0.5394 14 6 10.7491 3.0004 0.4587 15 6 11.9854 3.4785 0.8382 16 6 12.8612 2.3886 0.8503 17 6 14.3245 2.4302 1.2088 18 8 14.4676 2.7850 2.5856 19 14 15.0831 0.7537 0.9174 20 6 12.1626 1.2898 0.4770 21 7 10.8779 1.6481 0.2362 22 6 6.1166 3.7224 0.8915 23 6 3.3021 3.6757 0.0004 24 6 1.9210 3.6047 0.0001 25 6 1.2915 2.3753 -0.0004 26 1 -0.3634 -1.0277 -0.0005 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 0.5138 0.8900 29 1 4.0206 0.3799 0.0105 30 1 6.5918 2.7234 -1.9520 31 1 5.4452 4.0936 -1.6248 32 1 8.3655 2.2388 -0.2547 33 1 12.2303 4.5014 1.0831 34 1 14.8296 3.1704 0.5884 35 1 14.0415 2.1687 3.1970 36 1 16.5262 0.7817 1.2667 37 1 14.3822 -0.2698 1.7337 38 1 12.5639 0.2912 0.3858 39 1 10.1673 1.0509 -0.0456 40 1 5.4197 4.5474 1.0390 41 1 6.5550 3.3655 1.8235 42 1 3.7924 4.6379 0.0008 43 1 1.3342 4.5114 0.0002 44 1 0.2129 2.3203 -0.0003 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_10543058.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:37:38 Heat of formation + Delta-G solvation = -2.434319 kcal Electronic energy + Delta-G solvation = -26590.805504 eV Core-core repulsion = 22669.720989 eV Total energy + Delta-G solvation = -3921.084515 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.146 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.50839 -41.56023 -40.71260 -39.49504 -37.88769 -37.78569 -34.69654 -32.59813 -32.10719 -31.10995 -30.50003 -28.25377 -26.84564 -26.71382 -25.92639 -24.20305 -23.56404 -22.32708 -21.30374 -20.82972 -20.42212 -19.87286 -18.75574 -17.61346 -17.31474 -17.22728 -16.91731 -16.74844 -16.68454 -16.47645 -16.02987 -15.77360 -15.72882 -15.33554 -14.85153 -14.64970 -14.53422 -14.39786 -14.24864 -14.03683 -13.85679 -13.50953 -13.46736 -13.26129 -13.20762 -12.70402 -12.44783 -12.32373 -12.13609 -11.80761 -11.68244 -11.61399 -11.35203 -11.29154 -10.47445 -10.26766 -9.96551 -9.76574 -9.29941 -9.16968 -4.82745 0.30447 0.35763 0.46225 1.40185 1.55475 1.68706 1.89426 2.09499 2.13612 2.23947 2.33727 2.71899 3.42512 3.56820 3.65402 3.69755 3.79535 3.86123 3.93975 3.99241 4.06815 4.17031 4.17207 4.26401 4.33465 4.35886 4.37003 4.52872 4.59222 4.62798 4.69853 4.73574 4.76142 4.81255 4.91351 4.93596 4.98873 5.03166 5.07931 5.10570 5.32669 5.43740 5.49767 5.59097 5.67778 5.73621 5.80686 6.34199 6.42029 6.51309 6.63757 7.04715 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.339 6.339 3 C 0.109 3.891 4 C -0.165 4.165 5 C -0.035 4.035 6 C -0.066 4.066 7 H 0.111 0.889 8 C -0.121 4.121 9 C 0.116 3.884 10 H 0.089 0.911 11 N -0.697 5.697 12 C 0.591 3.409 13 O -0.574 6.574 14 C -0.069 4.069 15 C -0.103 4.103 16 C -0.224 4.224 17 C -0.061 4.061 18 O -0.558 6.558 19 Si 0.789 3.211 20 C 0.061 3.939 21 N -0.515 5.515 22 C -0.141 4.141 23 C -0.161 4.161 24 C -0.084 4.084 25 C -0.222 4.222 26 H 0.115 0.885 27 H 0.063 0.937 28 H 0.062 0.938 29 H 0.134 0.866 30 H 0.091 0.909 31 H 0.104 0.896 32 H 0.412 0.588 33 H 0.124 0.876 34 H 0.108 0.892 35 H 0.384 0.616 36 H -0.314 1.314 37 H -0.267 1.267 38 H 0.214 0.786 39 H 0.437 0.563 40 H 0.099 0.901 41 H 0.066 0.934 42 H 0.138 0.862 43 H 0.142 0.858 44 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.118 -7.115 -4.277 9.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.183 4.183 5 C -0.035 4.035 6 C -0.084 4.084 7 H 0.129 0.871 8 C -0.159 4.159 9 C 0.010 3.990 10 H 0.107 0.893 11 N -0.348 5.348 12 C 0.380 3.620 13 O -0.454 6.454 14 C -0.182 4.182 15 C -0.130 4.130 16 C -0.231 4.231 17 C -0.170 4.170 18 O -0.366 6.366 19 Si 0.692 3.308 20 C -0.078 4.078 21 N -0.112 5.112 22 C -0.180 4.180 23 C -0.179 4.179 24 C -0.102 4.102 25 C -0.241 4.241 26 H 0.134 0.866 27 H 0.082 0.918 28 H 0.080 0.920 29 H 0.152 0.848 30 H 0.109 0.891 31 H 0.122 0.878 32 H 0.249 0.751 33 H 0.142 0.858 34 H 0.126 0.874 35 H 0.233 0.767 36 H -0.243 1.243 37 H -0.193 1.193 38 H 0.230 0.770 39 H 0.279 0.721 40 H 0.118 0.882 41 H 0.085 0.915 42 H 0.156 0.844 43 H 0.160 0.840 44 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -3.526 -6.706 -4.090 8.610 hybrid contribution -1.038 0.087 1.209 1.596 sum -4.563 -6.619 -2.881 8.540 Atomic orbital electron populations 1.23293 0.76670 1.05392 1.02084 1.86037 1.23254 1.27276 1.88785 1.19298 0.92886 0.84614 0.96775 1.20507 0.91428 0.98859 1.07520 1.19613 0.95534 0.91844 0.96484 1.21613 0.89908 0.99508 0.97362 0.87062 1.23369 0.96715 0.99825 0.95996 1.21917 0.83093 0.96425 0.97548 0.89283 1.45368 1.07940 1.12528 1.68931 1.17245 0.82476 0.86244 0.76027 1.90852 1.85665 1.16270 1.52578 1.20091 0.95420 0.84754 1.17932 1.21235 0.91385 0.99339 1.01092 1.19875 0.97057 0.93494 1.12626 1.24764 0.94433 1.14097 0.83658 1.86572 1.79014 1.54411 1.16605 0.94250 0.75110 0.71974 0.89420 1.22379 0.83183 1.00415 1.01788 1.41858 1.11022 1.06814 1.51514 1.23590 0.97836 0.99023 0.97534 1.21169 0.93815 0.98814 1.04084 1.21240 0.95028 0.97558 0.96408 1.21491 1.00934 0.92453 1.09185 0.86644 0.91834 0.91956 0.84840 0.89091 0.87806 0.75142 0.85798 0.87405 0.76687 1.24277 1.19294 0.76991 0.72148 0.88242 0.91487 0.84377 0.84011 0.84329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.06 16 2 O -0.34 -1.51 10.50 -92.43 -0.97 -2.48 16 3 C 0.11 0.46 6.69 22.51 0.15 0.61 16 4 C -0.16 -0.39 9.65 22.37 0.22 -0.17 16 5 C -0.03 0.01 5.29 -19.88 -0.11 -0.09 16 6 C -0.07 0.31 3.85 -11.02 -0.04 0.27 16 7 H 0.11 -0.85 8.08 -2.38 -0.02 -0.87 16 8 C -0.12 0.71 7.29 31.12 0.23 0.94 16 9 C 0.12 -0.21 4.33 45.58 0.20 -0.01 16 10 H 0.09 0.26 7.46 -2.39 -0.02 0.24 16 11 N -0.70 1.90 5.26 -443.69 -2.33 -0.44 16 12 C 0.59 3.22 7.79 86.45 0.67 3.90 16 13 O -0.57 -8.84 16.48 -4.33 -0.07 -8.91 16 14 C -0.07 -0.16 7.06 40.35 0.28 0.13 16 15 C -0.10 -0.63 10.59 22.57 0.24 -0.39 16 16 C -0.22 -0.06 5.43 -20.12 -0.11 -0.17 16 17 C -0.06 -0.03 3.02 71.24 0.22 0.19 16 18 O -0.56 -2.87 12.88 -148.98 -1.92 -4.79 16 19 Si 0.79 -3.46 30.60 68.60 2.10 -1.36 16 20 C 0.06 -0.40 10.45 83.48 0.87 0.47 16 21 N -0.51 3.57 5.99 -183.61 -1.10 2.47 16 22 C -0.14 0.34 7.27 31.18 0.23 0.57 16 23 C -0.16 0.08 8.53 22.28 0.19 0.27 16 24 C -0.08 -0.01 10.04 22.25 0.22 0.21 16 25 C -0.22 -0.38 9.04 22.37 0.20 -0.18 16 26 H 0.12 -0.71 8.14 -2.39 -0.02 -0.73 16 27 H 0.06 -0.28 7.66 -2.39 -0.02 -0.30 16 28 H 0.06 -0.26 7.66 -2.38 -0.02 -0.28 16 29 H 0.13 0.03 8.05 -2.91 -0.02 0.00 16 30 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 31 H 0.10 -0.59 7.64 -2.39 -0.02 -0.61 16 32 H 0.41 -4.11 7.83 -92.71 -0.73 -4.84 16 33 H 0.12 1.30 8.06 -2.91 -0.02 1.28 16 34 H 0.11 0.11 7.96 -2.39 -0.02 0.09 16 35 H 0.38 -0.49 8.70 -74.05 -0.64 -1.14 16 36 H -0.31 -1.60 7.11 99.48 0.71 -0.90 16 37 H -0.27 0.84 7.11 99.48 0.71 1.54 16 38 H 0.21 -3.03 6.21 -2.91 -0.02 -3.04 16 39 H 0.44 -6.45 8.19 -92.70 -0.76 -7.21 16 40 H 0.10 -0.26 6.39 -2.39 -0.02 -0.27 16 41 H 0.07 -0.02 8.14 -2.38 -0.02 -0.04 16 42 H 0.14 -0.51 6.72 -2.91 -0.02 -0.53 16 43 H 0.14 -0.55 8.06 -2.91 -0.02 -0.58 16 44 H 0.14 -0.24 6.30 -2.91 -0.02 -0.26 16 Total: 0.00 -26.56 367.44 -0.55 -27.11 By element: Atomic # 1 Polarization: -18.17 SS G_CDS: -1.03 Total: -19.20 kcal Atomic # 6 Polarization: 2.81 SS G_CDS: 4.77 Total: 7.59 kcal Atomic # 7 Polarization: 5.47 SS G_CDS: -3.43 Total: 2.03 kcal Atomic # 8 Polarization: -13.21 SS G_CDS: -2.96 Total: -16.18 kcal Atomic # 14 Polarization: -3.46 SS G_CDS: 2.10 Total: -1.36 kcal Total: -26.56 -0.55 -27.11 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_10543058.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.678 kcal (2) G-P(sol) polarization free energy of solvation -26.563 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.885 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.549 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.113 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.434 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds