Wall clock time and date at job start Sat Mar 6 2021 14:37:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35892 * 117.00095 * 2 1 4 4 C 1.38721 * 120.05364 * 0.02562 * 3 2 1 5 5 C 1.38161 * 119.94098 * 179.97438 * 4 3 2 6 6 C 1.38252 * 120.05619 * 359.72294 * 5 4 3 7 7 C 1.38284 * 120.11119 * 0.54939 * 6 5 4 8 8 C 1.50696 * 119.97151 * 179.72151 * 7 6 5 9 9 H 1.09000 * 112.85168 * 190.92475 * 8 7 6 10 10 C 1.53778 * 113.61677 * 322.23026 * 8 7 6 11 11 C 1.53785 * 87.08095 * 139.98051 * 10 8 7 12 12 H 1.09002 * 113.69022 * 220.01197 * 11 10 8 13 13 N 1.46494 * 113.61533 * 89.11821 * 11 10 8 14 14 C 1.34780 * 120.00436 * 107.50219 * 13 11 10 15 15 O 1.21703 * 119.99263 * 354.48090 * 14 13 11 16 16 C 1.46673 * 120.00279 * 174.48040 * 14 13 11 17 17 C 1.37872 * 126.23659 * 4.91182 * 16 14 13 18 18 C 1.39829 * 107.08839 * 179.84958 * 17 16 14 19 19 C 1.50702 * 126.07062 * 180.14087 * 18 17 16 20 20 O 1.42894 * 109.47093 * 65.29646 * 19 18 17 21 21 Si 1.86300 * 109.47144 * 185.30143 * 19 18 17 22 22 C 1.35455 * 107.86301 * 0.41504 * 18 17 16 23 23 N 1.35531 * 108.87212 * 359.74313 * 22 18 17 24 24 C 1.46504 * 125.67950 * 179.97438 * 23 22 18 25 25 C 1.53781 * 87.08114 * 334.56773 * 11 10 8 26 26 C 1.38122 * 120.05459 * 359.45250 * 7 6 5 27 27 H 1.08994 * 109.47036 * 60.00300 * 1 2 3 28 28 H 1.09000 * 109.46991 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.47332 * 300.00040 * 1 2 3 30 30 H 1.07992 * 120.02767 * 359.95335 * 4 3 2 31 31 H 1.08003 * 119.97452 * 180.02562 * 5 4 3 32 32 H 1.08005 * 119.94401 * 180.29814 * 6 5 4 33 33 H 1.08998 * 113.61658 * 254.52629 * 10 8 7 34 34 H 1.09004 * 113.61279 * 25.43413 * 10 8 7 35 35 H 0.97007 * 120.00155 * 287.50333 * 13 11 10 36 36 H 1.08002 * 126.44878 * 359.96316 * 17 16 14 37 37 H 1.09006 * 109.46641 * 305.29934 * 19 18 17 38 38 H 0.96698 * 114.00060 * 60.00750 * 20 19 18 39 39 H 1.48495 * 110.00198 * 58.67849 * 21 19 18 40 40 H 1.48504 * 109.99720 * 179.97438 * 21 19 18 41 41 H 1.08000 * 125.56245 * 179.71220 * 22 18 17 42 42 H 1.08999 * 109.46756 * 272.01619 * 24 23 22 43 43 H 1.09004 * 109.46800 * 32.01172 * 24 23 22 44 44 H 1.09000 * 109.47445 * 152.01047 * 24 23 22 45 45 H 1.09004 * 113.61738 * 270.88465 * 25 11 10 46 46 H 1.09000 * 113.68924 * 139.99221 * 25 11 10 47 47 H 1.08007 * 120.02677 * 180.29154 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2916 2.3749 0.0005 5 6 1.9213 3.6047 0.0011 6 6 3.3019 3.6757 0.0069 7 6 4.0562 2.5167 0.0007 8 6 5.5610 2.5978 0.0006 9 1 6.0367 1.6367 -0.1948 10 6 6.1160 3.7475 -0.8566 11 6 7.1517 3.9735 0.2576 12 1 7.3484 5.0252 0.4659 13 7 8.3767 3.1882 0.0881 14 6 9.5211 3.7962 -0.2824 15 8 9.5156 4.9779 -0.5735 16 6 10.7730 3.0337 -0.3347 17 6 10.9108 1.6779 -0.1258 18 6 12.2678 1.3751 -0.2746 19 6 12.8924 0.0103 -0.1389 20 8 12.4085 -0.8406 -1.1799 21 14 14.7448 0.1595 -0.2694 22 6 12.9221 2.5272 -0.5562 23 7 12.0252 3.5424 -0.5955 24 6 12.3365 4.9476 -0.8695 25 6 6.1382 3.3338 1.2213 26 6 3.4315 1.2848 0.0001 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 0.2131 2.3200 0.0002 31 1 1.3344 4.5114 0.0019 32 1 3.7923 4.6380 0.0121 33 1 6.5534 3.4178 -1.7989 34 1 5.4189 4.5764 -0.9794 35 1 8.3643 2.2306 0.2426 36 1 10.1194 0.9808 0.1069 37 1 12.6295 -0.4149 0.8297 38 1 12.6071 -0.5233 -2.0715 39 1 15.2571 1.0672 0.7882 40 1 15.3728 -1.1797 -0.1366 41 1 13.9852 2.6214 -0.7218 42 1 12.5906 5.4518 0.0629 43 1 13.1814 5.0053 -1.5558 44 1 11.4693 5.4309 -1.3194 45 1 5.4472 4.0496 1.6665 46 1 6.5923 2.6700 1.9570 47 1 4.0211 0.3798 0.0000 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_10803934.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:37:42 Heat of formation + Delta-G solvation = 3.857715 kcal Electronic energy + Delta-G solvation = -28885.553066 eV Core-core repulsion = 24809.203775 eV Total energy + Delta-G solvation = -4076.349291 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.56419 -41.55825 -40.65151 -39.36134 -37.86855 -37.61578 -34.79872 -33.71008 -32.17795 -31.20852 -30.46062 -28.37130 -28.28140 -26.76912 -26.25924 -25.62124 -23.96949 -23.49940 -22.28219 -21.26519 -20.63348 -20.12941 -18.88781 -18.68272 -17.69961 -17.23749 -17.03840 -16.83249 -16.74744 -16.66059 -16.65553 -15.94373 -15.83878 -15.63922 -15.31833 -15.16092 -14.95075 -14.43932 -14.40958 -14.31644 -14.04113 -14.02145 -13.57118 -13.52299 -13.35164 -13.28718 -13.22819 -13.12589 -12.70423 -12.33888 -12.20489 -12.13527 -11.90725 -11.66719 -11.61684 -11.30896 -11.01116 -10.30561 -10.14238 -9.71919 -9.69830 -9.25628 -9.10762 -5.02596 0.35397 0.44323 0.52730 1.36881 1.50785 1.53989 1.69928 2.01993 2.27967 2.33087 2.35677 2.76704 3.39431 3.59251 3.63295 3.67284 3.72485 3.79280 3.85148 3.90669 3.91392 4.03377 4.15043 4.18867 4.19346 4.21587 4.26180 4.35802 4.36727 4.51966 4.56092 4.60024 4.63996 4.65789 4.66511 4.68855 4.76776 4.78389 4.92056 4.97642 5.07910 5.10709 5.18710 5.36996 5.47873 5.52404 5.66871 5.70600 5.81992 5.89883 6.11809 6.44894 6.46328 6.70387 7.16537 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.129 3.871 4 C -0.213 4.213 5 C -0.077 4.077 6 C -0.155 4.155 7 C -0.032 4.032 8 C -0.074 4.074 9 H 0.100 0.900 10 C -0.142 4.142 11 C 0.123 3.877 12 H 0.106 0.894 13 N -0.702 5.702 14 C 0.595 3.405 15 O -0.545 6.545 16 C -0.054 4.054 17 C -0.112 4.112 18 C -0.208 4.208 19 C -0.030 4.030 20 O -0.543 6.543 21 Si 0.683 3.317 22 C 0.027 3.973 23 N -0.403 5.403 24 C 0.060 3.940 25 C -0.135 4.135 26 C -0.149 4.149 27 H 0.056 0.944 28 H 0.101 0.899 29 H 0.056 0.944 30 H 0.127 0.873 31 H 0.125 0.875 32 H 0.125 0.875 33 H 0.076 0.924 34 H 0.097 0.903 35 H 0.404 0.596 36 H 0.145 0.855 37 H 0.111 0.889 38 H 0.377 0.623 39 H -0.258 1.258 40 H -0.256 1.256 41 H 0.174 0.826 42 H 0.077 0.923 43 H 0.087 0.913 44 H 0.109 0.891 45 H 0.101 0.899 46 H 0.078 0.922 47 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.299 1.007 -1.094 1.517 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.232 4.232 5 C -0.095 4.095 6 C -0.173 4.173 7 C -0.032 4.032 8 C -0.093 4.093 9 H 0.118 0.882 10 C -0.181 4.181 11 C 0.018 3.982 12 H 0.124 0.876 13 N -0.353 5.353 14 C 0.383 3.617 15 O -0.424 6.424 16 C -0.168 4.168 17 C -0.138 4.138 18 C -0.215 4.215 19 C -0.142 4.142 20 O -0.348 6.348 21 Si 0.585 3.415 22 C -0.109 4.109 23 N -0.075 5.075 24 C -0.081 4.081 25 C -0.173 4.173 26 C -0.167 4.167 27 H 0.075 0.925 28 H 0.120 0.880 29 H 0.074 0.926 30 H 0.145 0.855 31 H 0.143 0.857 32 H 0.143 0.857 33 H 0.095 0.905 34 H 0.116 0.884 35 H 0.240 0.760 36 H 0.163 0.837 37 H 0.128 0.872 38 H 0.225 0.775 39 H -0.182 1.182 40 H -0.181 1.181 41 H 0.190 0.810 42 H 0.096 0.904 43 H 0.105 0.895 44 H 0.127 0.873 45 H 0.119 0.881 46 H 0.097 0.903 47 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.401 1.605 -0.439 1.712 hybrid contribution -0.873 -0.368 0.455 1.051 sum -0.472 1.237 0.016 1.324 Atomic orbital electron populations 1.23084 0.78103 1.04192 1.01427 1.86080 1.21606 1.26906 1.88575 1.19039 0.92328 0.84255 0.95969 1.21269 1.00151 0.92470 1.09272 1.20943 0.94584 0.97048 0.96898 1.20920 0.93635 0.98140 1.04574 1.19439 0.94686 0.92165 0.96918 1.21623 0.90912 0.99277 0.97463 0.88217 1.23569 0.97891 0.98415 0.98195 1.21855 0.82938 0.96823 0.96589 0.87566 1.45301 1.08086 1.11782 1.70097 1.16944 0.82345 0.86006 0.76367 1.90793 1.86435 1.15877 1.49269 1.19979 0.86042 0.93368 1.17368 1.21188 0.96746 0.92444 1.03460 1.19781 0.94496 0.95025 1.12150 1.24315 1.08982 0.87589 0.93337 1.86483 1.82160 1.48918 1.17264 0.95109 0.75170 0.81950 0.89267 1.21865 0.95426 0.86724 1.06899 1.43811 1.05472 1.08269 1.49971 1.22416 1.04562 0.78134 1.03008 1.23437 0.97528 1.00036 0.96256 1.20313 0.91320 0.98240 1.06851 0.92547 0.88046 0.92561 0.85512 0.85672 0.85699 0.90518 0.88429 0.76008 0.83748 0.87212 0.77549 1.18231 1.18054 0.80953 0.90396 0.89474 0.87304 0.88099 0.90290 0.85260 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.81 10.50 -19.40 -0.20 -1.02 16 3 C 0.13 0.32 6.69 -39.21 -0.26 0.06 16 4 C -0.21 -0.27 9.04 -39.43 -0.36 -0.62 16 5 C -0.08 -0.04 10.04 -39.60 -0.40 -0.44 16 6 C -0.15 -0.05 8.59 -39.56 -0.34 -0.39 16 7 C -0.03 -0.02 5.29 -104.65 -0.55 -0.57 16 8 C -0.07 0.09 3.86 -90.96 -0.35 -0.26 16 9 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 10 C -0.14 0.11 7.25 -25.92 -0.19 -0.07 16 11 C 0.12 -0.07 4.29 -67.12 -0.29 -0.36 16 12 H 0.11 0.08 7.53 -51.93 -0.39 -0.31 16 13 N -0.70 0.16 5.25 -54.32 -0.28 -0.13 16 14 C 0.59 1.45 7.77 -12.85 -0.10 1.35 16 15 O -0.54 -2.82 14.25 5.19 0.07 -2.74 16 16 C -0.05 -0.10 6.89 -81.98 -0.56 -0.66 16 17 C -0.11 -0.09 10.29 -39.12 -0.40 -0.49 16 18 C -0.21 -0.06 5.43 -105.02 -0.57 -0.63 16 19 C -0.03 0.01 3.02 36.01 0.11 0.11 16 20 O -0.54 -0.21 12.88 -35.23 -0.45 -0.66 16 21 Si 0.68 -0.89 30.60 -169.99 -5.20 -6.09 16 22 C 0.03 -0.01 9.94 -16.91 -0.17 -0.18 16 23 N -0.40 -0.36 3.16 -120.23 -0.38 -0.74 16 24 C 0.06 -0.05 10.70 59.85 0.64 0.59 16 25 C -0.13 0.24 7.29 -25.92 -0.19 0.05 16 26 C -0.15 -0.27 9.65 -39.43 -0.38 -0.65 16 27 H 0.06 -0.10 7.66 -51.93 -0.40 -0.49 16 28 H 0.10 -0.25 8.14 -51.93 -0.42 -0.68 16 29 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 30 H 0.13 -0.06 6.30 -52.49 -0.33 -0.39 16 31 H 0.13 -0.17 8.06 -52.48 -0.42 -0.59 16 32 H 0.13 -0.16 6.67 -52.48 -0.35 -0.51 16 33 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.10 -0.12 6.32 -51.93 -0.33 -0.44 16 35 H 0.40 -0.88 7.60 -40.82 -0.31 -1.19 16 36 H 0.14 -0.12 7.45 -52.49 -0.39 -0.51 16 37 H 0.11 0.04 7.96 -51.93 -0.41 -0.37 16 38 H 0.38 -1.25 8.70 45.56 0.40 -0.85 16 39 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 40 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 41 H 0.17 -0.58 6.21 -52.49 -0.33 -0.90 16 42 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 44 H 0.11 0.10 6.11 -51.93 -0.32 -0.21 16 45 H 0.10 -0.20 7.71 -51.93 -0.40 -0.60 16 46 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 47 H 0.13 0.13 8.05 -52.48 -0.42 -0.30 16 LS Contribution 385.48 15.07 5.81 5.81 Total: 0.00 -8.95 385.48 -10.55 -19.49 By element: Atomic # 1 Polarization: -5.17 SS G_CDS: -6.53 Total: -11.70 kcal Atomic # 6 Polarization: 1.16 SS G_CDS: -3.37 Total: -2.21 kcal Atomic # 7 Polarization: -0.20 SS G_CDS: -0.67 Total: -0.87 kcal Atomic # 8 Polarization: -3.84 SS G_CDS: -0.58 Total: -4.42 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.20 Total: -6.09 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -8.95 -10.55 -19.49 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_10803934.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.350 kcal (2) G-P(sol) polarization free energy of solvation -8.946 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.546 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.492 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.858 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds