Wall clock time and date at job start Sat Mar 6 2021 14:37:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35898 * 116.99941 * 2 1 4 4 C 1.38701 * 120.05902 * 359.97438 * 3 2 1 5 5 C 1.38172 * 119.94909 * 180.02562 * 4 3 2 6 6 C 1.38246 * 120.04926 * 0.02562 * 5 4 3 7 7 C 1.38279 * 120.11381 * 359.95299 * 6 5 4 8 8 C 1.50703 * 119.97284 * 180.02562 * 7 6 5 9 9 H 1.08999 * 112.85316 * 191.21676 * 8 7 6 10 10 C 1.53781 * 113.61405 * 322.52418 * 8 7 6 11 11 C 1.53773 * 87.08390 * 139.97969 * 10 8 7 12 12 H 1.09002 * 113.62032 * 220.02202 * 11 10 8 13 13 N 1.46506 * 113.61424 * 89.11766 * 11 10 8 14 14 C 1.34772 * 120.00041 * 107.50485 * 13 11 10 15 15 O 1.21697 * 120.00006 * 354.89482 * 14 13 11 16 16 C 1.46679 * 119.99674 * 174.89753 * 14 13 11 17 17 C 1.37869 * 126.23830 * 4.96290 * 16 14 13 18 18 C 1.39829 * 107.08868 * 179.97438 * 17 16 14 19 19 C 1.35451 * 107.86338 * 359.97438 * 18 17 16 20 20 C 1.50703 * 125.56363 * 180.02562 * 19 18 17 21 21 O 1.42901 * 109.47212 * 149.97288 * 20 19 18 22 22 Si 1.86299 * 109.46986 * 29.97798 * 20 19 18 23 23 N 1.35531 * 108.87677 * 359.76678 * 19 18 17 24 24 C 1.46491 * 125.68397 * 180.26202 * 23 19 18 25 25 C 1.53783 * 113.61326 * 60.01850 * 8 7 6 26 26 C 1.38125 * 120.05679 * 0.04287 * 7 6 5 27 27 H 1.08996 * 109.47189 * 299.99947 * 1 2 3 28 28 H 1.08996 * 109.46963 * 59.99987 * 1 2 3 29 29 H 1.08993 * 109.47070 * 180.02562 * 1 2 3 30 30 H 1.08003 * 120.02967 * 359.97438 * 4 3 2 31 31 H 1.08000 * 119.97501 * 179.97438 * 5 4 3 32 32 H 1.08001 * 119.93932 * 180.02562 * 6 5 4 33 33 H 1.08998 * 113.61665 * 254.53368 * 10 8 7 34 34 H 1.09006 * 113.61563 * 25.43146 * 10 8 7 35 35 H 0.97005 * 119.99318 * 287.50445 * 13 11 10 36 36 H 1.08000 * 126.45336 * 359.97438 * 17 16 14 37 37 H 1.07998 * 126.06713 * 180.02562 * 18 17 16 38 38 H 1.08994 * 109.47188 * 269.97741 * 20 19 18 39 39 H 0.96696 * 113.99965 * 179.97438 * 21 20 19 40 40 H 1.48498 * 110.00437 * 59.99726 * 22 20 19 41 41 H 1.48504 * 110.00147 * 181.32021 * 22 20 19 42 42 H 1.08999 * 109.47506 * 275.90965 * 24 23 19 43 43 H 1.09007 * 109.46898 * 35.91385 * 24 23 19 44 44 H 1.09005 * 109.47204 * 155.91163 * 24 23 19 45 45 H 1.08993 * 113.61860 * 334.57210 * 25 8 7 46 46 H 1.09006 * 113.61115 * 105.47367 * 25 8 7 47 47 H 1.08001 * 120.02849 * 180.24914 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2918 2.3749 -0.0005 5 6 1.9214 3.6048 -0.0011 6 6 3.3020 3.6757 -0.0016 7 6 4.0562 2.5167 -0.0006 8 6 5.5611 2.5977 -0.0006 9 1 6.0368 1.6365 -0.1952 10 6 6.1161 3.7467 -0.8588 11 6 7.1517 3.9737 0.2550 12 1 7.3475 5.0259 0.4615 13 7 8.3769 3.1883 0.0862 14 6 9.5212 3.7959 -0.2848 15 8 9.5172 4.9791 -0.5696 16 6 10.7713 3.0312 -0.3452 17 6 10.9069 1.6738 -0.1450 18 6 12.2633 1.3696 -0.2965 19 6 12.9180 2.5208 -0.5810 20 6 14.4001 2.6496 -0.8222 21 8 14.6436 3.7306 -1.7245 22 14 15.0490 1.0667 -1.5600 23 7 12.0221 3.5369 -0.6190 24 6 12.3332 4.9404 -0.9009 25 6 6.1383 3.3349 1.2193 26 6 3.4315 1.2848 0.0000 27 1 -0.3633 0.5138 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 0.2131 2.3200 -0.0014 31 1 1.3345 4.5114 -0.0019 32 1 3.7923 4.6380 -0.0016 33 1 6.5535 3.4162 -1.8010 34 1 5.4191 4.5756 -0.9824 35 1 8.3643 2.2308 0.2416 36 1 10.1148 0.9769 0.0855 37 1 12.7095 0.3905 -0.2040 38 1 14.9065 2.8442 0.1231 39 1 15.5789 3.8721 -1.9253 40 1 14.3664 0.7900 -2.8495 41 1 16.5150 1.1693 -1.7732 42 1 12.6605 5.4313 0.0156 43 1 13.1276 4.9939 -1.6454 44 1 11.4430 5.4403 -1.2828 45 1 5.4474 4.0511 1.6639 46 1 6.5937 2.6718 1.9550 47 1 4.0210 0.3799 0.0048 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_10803936.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:37:45 Heat of formation + Delta-G solvation = 5.315964 kcal Electronic energy + Delta-G solvation = -28905.381587 eV Core-core repulsion = 24829.095530 eV Total energy + Delta-G solvation = -4076.286057 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.48952 -41.53819 -40.63209 -39.33367 -37.95341 -37.76231 -34.72341 -33.52064 -32.19002 -31.45637 -30.75601 -28.29440 -27.41494 -27.08558 -26.74045 -25.64887 -23.58684 -23.21180 -22.30416 -21.48095 -20.38016 -20.08293 -18.85622 -18.62481 -18.45078 -17.23812 -17.12578 -16.88130 -16.76577 -16.65424 -16.57012 -16.03794 -15.85350 -15.63018 -15.18195 -15.01592 -14.54217 -14.43004 -14.34780 -14.29281 -14.00198 -13.93946 -13.63819 -13.53554 -13.30772 -13.21558 -13.07643 -12.94626 -12.68907 -12.49606 -12.31706 -12.11819 -12.05287 -11.65470 -11.59515 -11.28247 -10.99724 -10.71987 -10.08623 -9.70762 -9.64662 -9.10168 -8.98460 -4.98635 0.36470 0.47986 0.53681 1.13191 1.55375 1.66958 1.79426 1.98363 2.33364 2.42663 2.45432 2.77820 2.97100 3.42238 3.64460 3.66659 3.71522 3.81518 3.86765 3.92999 4.04717 4.10907 4.16113 4.20196 4.22016 4.27987 4.37140 4.42622 4.50508 4.52776 4.57862 4.62108 4.64417 4.66480 4.71419 4.80442 4.92836 4.98050 5.01238 5.08144 5.10769 5.12763 5.21125 5.37832 5.51189 5.55657 5.71375 5.79757 5.82871 6.07818 6.22528 6.26819 6.46933 6.52324 7.24151 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.129 3.871 4 C -0.213 4.213 5 C -0.077 4.077 6 C -0.155 4.155 7 C -0.032 4.032 8 C -0.074 4.074 9 H 0.100 0.900 10 C -0.143 4.143 11 C 0.123 3.877 12 H 0.106 0.894 13 N -0.702 5.702 14 C 0.595 3.405 15 O -0.545 6.545 16 C -0.056 4.056 17 C -0.134 4.134 18 C -0.201 4.201 19 C 0.059 3.941 20 C -0.057 4.057 21 O -0.541 6.541 22 Si 0.714 3.286 23 N -0.388 5.388 24 C 0.056 3.944 25 C -0.134 4.134 26 C -0.148 4.148 27 H 0.056 0.944 28 H 0.056 0.944 29 H 0.101 0.899 30 H 0.127 0.873 31 H 0.125 0.875 32 H 0.125 0.875 33 H 0.076 0.924 34 H 0.097 0.903 35 H 0.404 0.596 36 H 0.148 0.852 37 H 0.154 0.846 38 H 0.082 0.918 39 H 0.383 0.617 40 H -0.253 1.253 41 H -0.259 1.259 42 H 0.070 0.930 43 H 0.105 0.895 44 H 0.103 0.897 45 H 0.100 0.900 46 H 0.079 0.921 47 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.071 -3.005 2.577 3.959 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.232 4.232 5 C -0.095 4.095 6 C -0.173 4.173 7 C -0.032 4.032 8 C -0.092 4.092 9 H 0.118 0.882 10 C -0.182 4.182 11 C 0.018 3.982 12 H 0.124 0.876 13 N -0.353 5.353 14 C 0.384 3.616 15 O -0.424 6.424 16 C -0.170 4.170 17 C -0.160 4.160 18 C -0.225 4.225 19 C -0.060 4.060 20 C -0.166 4.166 21 O -0.349 6.349 22 Si 0.613 3.387 23 N -0.059 5.059 24 C -0.085 4.085 25 C -0.172 4.172 26 C -0.167 4.167 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.120 0.880 30 H 0.145 0.855 31 H 0.143 0.857 32 H 0.143 0.857 33 H 0.094 0.906 34 H 0.115 0.885 35 H 0.240 0.760 36 H 0.165 0.835 37 H 0.172 0.828 38 H 0.100 0.900 39 H 0.233 0.767 40 H -0.177 1.177 41 H -0.184 1.184 42 H 0.088 0.912 43 H 0.123 0.877 44 H 0.121 0.879 45 H 0.119 0.881 46 H 0.098 0.902 47 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.037 -2.253 1.656 2.797 hybrid contribution 0.151 0.728 -0.233 0.779 sum 0.113 -1.525 1.423 2.089 Atomic orbital electron populations 1.23081 0.78113 1.04183 1.01428 1.86079 1.21598 1.26912 1.88593 1.19033 0.92333 0.84243 0.96002 1.21267 1.00147 0.92477 1.09289 1.20945 0.94588 0.97047 0.96899 1.20923 0.93636 0.98169 1.04534 1.19447 0.94715 0.92158 0.96877 1.21624 0.90862 0.99266 0.97495 0.88199 1.23575 0.97938 0.98422 0.98230 1.21844 0.82962 0.96882 0.96527 0.87608 1.45275 1.08024 1.11743 1.70249 1.16959 0.82336 0.86046 0.76309 1.90785 1.86332 1.15873 1.49363 1.19986 0.86013 0.93670 1.17324 1.21252 0.97049 0.92661 1.05054 1.20461 0.93542 0.97052 1.11422 1.19980 0.90139 0.88147 1.07716 1.24601 0.93449 1.01473 0.97032 1.86492 1.31232 1.50759 1.66461 0.94472 0.78648 0.80863 0.84730 1.43727 1.05053 1.08307 1.48859 1.22580 1.04893 0.77924 1.03065 1.23432 0.97503 1.00014 0.96237 1.20309 0.91302 0.98227 1.06872 0.92558 0.92562 0.88048 0.85524 0.85683 0.85698 0.90557 0.88468 0.76027 0.83470 0.82842 0.90019 0.76697 1.17658 1.18399 0.91186 0.87705 0.87850 0.88135 0.90233 0.85252 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.79 10.50 -19.42 -0.20 -0.99 16 3 C 0.13 0.31 6.69 -39.22 -0.26 0.05 16 4 C -0.21 -0.27 9.04 -39.43 -0.36 -0.63 16 5 C -0.08 -0.05 10.04 -39.60 -0.40 -0.45 16 6 C -0.15 -0.07 8.61 -39.56 -0.34 -0.41 16 7 C -0.03 -0.02 5.29 -104.65 -0.55 -0.57 16 8 C -0.07 0.08 3.86 -90.96 -0.35 -0.27 16 9 H 0.10 -0.19 8.09 -51.93 -0.42 -0.61 16 10 C -0.14 0.07 7.25 -25.92 -0.19 -0.12 16 11 C 0.12 -0.02 4.29 -67.12 -0.29 -0.31 16 12 H 0.11 0.14 7.53 -51.93 -0.39 -0.25 16 13 N -0.70 -0.11 5.25 -54.32 -0.29 -0.40 16 14 C 0.59 2.07 7.77 -12.86 -0.10 1.97 16 15 O -0.54 -3.58 14.18 5.19 0.07 -3.50 16 16 C -0.06 -0.17 6.89 -81.98 -0.56 -0.74 16 17 C -0.13 -0.10 10.35 -39.12 -0.41 -0.51 16 18 C -0.20 -0.10 9.37 -39.98 -0.37 -0.48 16 19 C 0.06 0.11 6.18 -81.95 -0.51 -0.39 16 20 C -0.06 0.03 2.98 36.01 0.11 0.14 16 21 O -0.54 -0.01 9.79 -35.23 -0.35 -0.35 16 22 Si 0.71 -1.12 31.10 -169.99 -5.29 -6.41 16 23 N -0.39 -1.37 3.16 -115.62 -0.37 -1.74 16 24 C 0.06 0.16 10.30 59.84 0.62 0.78 16 25 C -0.13 0.23 7.29 -25.92 -0.19 0.04 16 26 C -0.15 -0.26 9.65 -39.43 -0.38 -0.64 16 27 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 28 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 29 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 30 H 0.13 -0.05 6.30 -52.48 -0.33 -0.38 16 31 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 32 H 0.13 -0.14 6.65 -52.49 -0.35 -0.49 16 33 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.10 -0.08 6.31 -51.93 -0.33 -0.41 16 35 H 0.40 -0.91 7.60 -40.82 -0.31 -1.22 16 36 H 0.15 -0.35 7.45 -52.49 -0.39 -0.74 16 37 H 0.15 -0.41 6.85 -52.49 -0.36 -0.76 16 38 H 0.08 -0.17 7.96 -51.93 -0.41 -0.59 16 39 H 0.38 -1.55 8.74 45.56 0.40 -1.15 16 40 H -0.25 -0.60 7.11 56.52 0.40 -0.19 16 41 H -0.26 -0.03 7.11 56.52 0.40 0.37 16 42 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 43 H 0.10 0.24 5.48 -51.93 -0.28 -0.04 16 44 H 0.10 0.44 5.93 -51.93 -0.31 0.13 16 45 H 0.10 -0.18 7.72 -51.93 -0.40 -0.58 16 46 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 47 H 0.13 0.10 8.05 -52.49 -0.42 -0.32 16 LS Contribution 380.48 15.07 5.73 5.73 Total: 0.00 -9.36 380.48 -10.64 -20.00 By element: Atomic # 1 Polarization: -4.33 SS G_CDS: -6.42 Total: -10.75 kcal Atomic # 6 Polarization: 1.95 SS G_CDS: -3.54 Total: -1.59 kcal Atomic # 7 Polarization: -1.49 SS G_CDS: -0.65 Total: -2.14 kcal Atomic # 8 Polarization: -4.37 SS G_CDS: -0.48 Total: -4.85 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: -5.29 Total: -6.41 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -9.36 -10.64 -20.00 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_10803936.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.312 kcal (2) G-P(sol) polarization free energy of solvation -9.359 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.953 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.637 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.997 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.316 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds