Wall clock time and date at job start Sat Mar 6 2021 14:37:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35898 * 116.99941 * 2 1 4 4 C 1.38701 * 120.05902 * 359.97438 * 3 2 1 5 5 C 1.38172 * 119.94909 * 180.02562 * 4 3 2 6 6 C 1.38246 * 120.04926 * 0.02562 * 5 4 3 7 7 C 1.38279 * 120.11381 * 359.95299 * 6 5 4 8 8 C 1.50703 * 119.97284 * 180.02562 * 7 6 5 9 9 H 1.08999 * 112.85316 * 191.21676 * 8 7 6 10 10 C 1.53781 * 113.61405 * 322.52418 * 8 7 6 11 11 C 1.53773 * 87.08390 * 139.97969 * 10 8 7 12 12 H 1.09002 * 113.62032 * 220.02202 * 11 10 8 13 13 N 1.46506 * 113.61424 * 89.11766 * 11 10 8 14 14 C 1.34772 * 120.00041 * 107.50485 * 13 11 10 15 15 O 1.21697 * 120.00006 * 354.89482 * 14 13 11 16 16 C 1.46679 * 119.99674 * 174.89753 * 14 13 11 17 17 C 1.37869 * 126.23830 * 4.96290 * 16 14 13 18 18 C 1.39829 * 107.08868 * 179.97438 * 17 16 14 19 19 C 1.35451 * 107.86338 * 359.97438 * 18 17 16 20 20 C 1.50703 * 125.56363 * 180.02562 * 19 18 17 21 21 O 1.42901 * 109.47212 * 149.97288 * 20 19 18 22 22 Si 1.86299 * 109.46986 * 29.97798 * 20 19 18 23 23 N 1.35531 * 108.87677 * 359.76678 * 19 18 17 24 24 C 1.46491 * 125.68397 * 180.26202 * 23 19 18 25 25 C 1.53783 * 113.61326 * 60.01850 * 8 7 6 26 26 C 1.38125 * 120.05679 * 0.04287 * 7 6 5 27 27 H 1.08996 * 109.47189 * 299.99947 * 1 2 3 28 28 H 1.08996 * 109.46963 * 59.99987 * 1 2 3 29 29 H 1.08993 * 109.47070 * 180.02562 * 1 2 3 30 30 H 1.08003 * 120.02967 * 359.97438 * 4 3 2 31 31 H 1.08000 * 119.97501 * 179.97438 * 5 4 3 32 32 H 1.08001 * 119.93932 * 180.02562 * 6 5 4 33 33 H 1.08998 * 113.61665 * 254.53368 * 10 8 7 34 34 H 1.09006 * 113.61563 * 25.43146 * 10 8 7 35 35 H 0.97005 * 119.99318 * 287.50445 * 13 11 10 36 36 H 1.08000 * 126.45336 * 359.97438 * 17 16 14 37 37 H 1.07998 * 126.06713 * 180.02562 * 18 17 16 38 38 H 1.08994 * 109.47188 * 269.97741 * 20 19 18 39 39 H 0.96696 * 113.99965 * 179.97438 * 21 20 19 40 40 H 1.48498 * 110.00437 * 59.99726 * 22 20 19 41 41 H 1.48504 * 110.00147 * 181.32021 * 22 20 19 42 42 H 1.08999 * 109.47506 * 275.90965 * 24 23 19 43 43 H 1.09007 * 109.46898 * 35.91385 * 24 23 19 44 44 H 1.09005 * 109.47204 * 155.91163 * 24 23 19 45 45 H 1.08993 * 113.61860 * 334.57210 * 25 8 7 46 46 H 1.09006 * 113.61115 * 105.47367 * 25 8 7 47 47 H 1.08001 * 120.02849 * 180.24914 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2918 2.3749 -0.0005 5 6 1.9214 3.6048 -0.0011 6 6 3.3020 3.6757 -0.0016 7 6 4.0562 2.5167 -0.0006 8 6 5.5611 2.5977 -0.0006 9 1 6.0368 1.6365 -0.1952 10 6 6.1161 3.7467 -0.8588 11 6 7.1517 3.9737 0.2550 12 1 7.3475 5.0259 0.4615 13 7 8.3769 3.1883 0.0862 14 6 9.5212 3.7959 -0.2848 15 8 9.5172 4.9791 -0.5696 16 6 10.7713 3.0312 -0.3452 17 6 10.9069 1.6738 -0.1450 18 6 12.2633 1.3696 -0.2965 19 6 12.9180 2.5208 -0.5810 20 6 14.4001 2.6496 -0.8222 21 8 14.6436 3.7306 -1.7245 22 14 15.0490 1.0667 -1.5600 23 7 12.0221 3.5369 -0.6190 24 6 12.3332 4.9404 -0.9009 25 6 6.1383 3.3349 1.2193 26 6 3.4315 1.2848 0.0000 27 1 -0.3633 0.5138 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 0.2131 2.3200 -0.0014 31 1 1.3345 4.5114 -0.0019 32 1 3.7923 4.6380 -0.0016 33 1 6.5535 3.4162 -1.8010 34 1 5.4191 4.5756 -0.9824 35 1 8.3643 2.2308 0.2416 36 1 10.1148 0.9769 0.0855 37 1 12.7095 0.3905 -0.2040 38 1 14.9065 2.8442 0.1231 39 1 15.5789 3.8721 -1.9253 40 1 14.3664 0.7900 -2.8495 41 1 16.5150 1.1693 -1.7732 42 1 12.6605 5.4313 0.0156 43 1 13.1276 4.9939 -1.6454 44 1 11.4430 5.4403 -1.2828 45 1 5.4474 4.0511 1.6639 46 1 6.5937 2.6718 1.9550 47 1 4.0210 0.3799 0.0048 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_10803936.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:37:44 Heat of formation + Delta-G solvation = 6.919048 kcal Electronic energy + Delta-G solvation = -28905.312072 eV Core-core repulsion = 24829.095530 eV Total energy + Delta-G solvation = -4076.216542 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.57207 -41.55447 -40.69655 -39.46046 -37.92714 -37.80081 -34.84521 -33.63271 -32.22238 -31.48751 -30.77530 -28.24014 -27.51944 -27.15483 -26.68539 -25.64307 -23.61601 -23.27652 -22.33433 -21.55348 -20.46236 -20.11172 -18.88474 -18.63382 -18.47105 -17.27738 -17.19917 -16.92349 -16.82852 -16.66322 -16.60868 -16.08127 -15.88469 -15.66804 -15.31188 -15.05992 -14.61766 -14.44894 -14.42731 -14.30577 -13.99972 -13.97883 -13.63797 -13.48619 -13.27022 -13.21814 -13.14925 -13.01992 -12.67280 -12.56399 -12.28212 -12.10989 -12.09104 -11.64410 -11.57682 -11.26943 -11.15360 -10.75814 -10.18704 -9.74026 -9.73204 -9.15141 -9.04945 -4.86900 0.32601 0.36179 0.48433 1.19054 1.56636 1.68956 1.78323 2.04171 2.30583 2.34165 2.36245 2.74324 3.09432 3.46021 3.62986 3.69142 3.72860 3.77130 3.88472 3.96801 4.01463 4.09994 4.19290 4.28529 4.29890 4.35307 4.38368 4.39488 4.41030 4.55181 4.58290 4.62299 4.65039 4.71603 4.78070 4.78459 4.85985 4.97854 5.02439 5.10248 5.10821 5.15145 5.18892 5.34862 5.48243 5.52786 5.70520 5.78235 5.83039 6.01507 6.15282 6.44399 6.46220 6.51606 7.11358 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.339 6.339 3 C 0.110 3.890 4 C -0.222 4.222 5 C -0.084 4.084 6 C -0.161 4.161 7 C -0.034 4.034 8 C -0.067 4.067 9 H 0.111 0.889 10 C -0.141 4.141 11 C 0.119 3.881 12 H 0.088 0.912 13 N -0.686 5.686 14 C 0.589 3.411 15 O -0.587 6.587 16 C -0.090 4.090 17 C -0.123 4.123 18 C -0.206 4.206 19 C 0.043 3.957 20 C -0.069 4.069 21 O -0.561 6.561 22 Si 0.810 3.190 23 N -0.407 5.407 24 C 0.062 3.938 25 C -0.121 4.121 26 C -0.165 4.165 27 H 0.063 0.937 28 H 0.062 0.938 29 H 0.115 0.885 30 H 0.139 0.861 31 H 0.142 0.858 32 H 0.139 0.861 33 H 0.064 0.936 34 H 0.100 0.900 35 H 0.417 0.583 36 H 0.179 0.821 37 H 0.187 0.813 38 H 0.102 0.898 39 H 0.399 0.601 40 H -0.309 1.309 41 H -0.280 1.280 42 H 0.072 0.928 43 H 0.108 0.892 44 H 0.083 0.917 45 H 0.105 0.895 46 H 0.091 0.909 47 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.242 -4.307 3.488 5.548 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.065 3.935 4 C -0.241 4.241 5 C -0.102 4.102 6 C -0.179 4.179 7 C -0.034 4.034 8 C -0.085 4.085 9 H 0.129 0.871 10 C -0.180 4.180 11 C 0.014 3.986 12 H 0.106 0.894 13 N -0.337 5.337 14 C 0.379 3.621 15 O -0.470 6.470 16 C -0.203 4.203 17 C -0.149 4.149 18 C -0.229 4.229 19 C -0.075 4.075 20 C -0.176 4.176 21 O -0.372 6.372 22 Si 0.713 3.287 23 N -0.080 5.080 24 C -0.078 4.078 25 C -0.158 4.158 26 C -0.183 4.183 27 H 0.082 0.918 28 H 0.080 0.920 29 H 0.134 0.866 30 H 0.157 0.843 31 H 0.160 0.840 32 H 0.156 0.844 33 H 0.083 0.917 34 H 0.118 0.882 35 H 0.255 0.745 36 H 0.196 0.804 37 H 0.204 0.796 38 H 0.120 0.880 39 H 0.252 0.748 40 H -0.237 1.237 41 H -0.206 1.206 42 H 0.090 0.910 43 H 0.126 0.874 44 H 0.102 0.898 45 H 0.123 0.877 46 H 0.109 0.891 47 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 0.118 -3.579 2.607 4.429 hybrid contribution 0.091 1.130 -0.573 1.270 sum 0.210 -2.449 2.034 3.191 Atomic orbital electron populations 1.23290 0.76677 1.05388 1.02080 1.86041 1.23254 1.27275 1.88784 1.19286 0.92845 0.84632 0.96770 1.21484 1.00922 0.92429 1.09242 1.21237 0.94985 0.97552 0.96452 1.21170 0.93826 0.98771 1.04133 1.19610 0.95484 0.91882 0.96416 1.21615 0.89944 0.99499 0.97419 0.87119 1.23560 0.97843 0.98924 0.97655 1.21861 0.83007 0.96224 0.97533 0.89387 1.45167 1.07278 1.12368 1.68930 1.17207 0.83279 0.85659 0.75971 1.90757 1.86989 1.17638 1.51597 1.20216 0.85858 0.94784 1.19435 1.21718 0.98170 0.91979 1.03047 1.20965 0.93443 0.98003 1.10488 1.20606 0.91213 0.88314 1.07389 1.24929 0.92403 1.02130 0.98181 1.86444 1.32952 1.51151 1.66682 0.93439 0.75530 0.78563 0.81162 1.43909 1.05720 1.08526 1.49861 1.22431 1.03918 0.78356 1.03139 1.23370 0.96625 0.99873 0.95969 1.20515 0.91462 0.98883 1.07457 0.91826 0.91955 0.86647 0.84291 0.83975 0.84375 0.91690 0.88154 0.74457 0.80408 0.79628 0.88014 0.74826 1.23686 1.20604 0.90970 0.87418 0.89849 0.87707 0.89081 0.84879 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.34 -1.87 10.50 -92.40 -0.97 -2.84 16 3 C 0.11 0.58 6.69 22.50 0.15 0.73 16 4 C -0.22 -0.59 9.04 22.36 0.20 -0.38 16 5 C -0.08 -0.09 10.04 22.26 0.22 0.14 16 6 C -0.16 -0.10 8.61 22.28 0.19 0.09 16 7 C -0.03 -0.04 5.29 -19.88 -0.11 -0.14 16 8 C -0.07 0.18 3.86 -11.01 -0.04 0.13 16 9 H 0.11 -0.53 8.09 -2.39 -0.02 -0.55 16 10 C -0.14 0.07 7.25 31.12 0.23 0.29 16 11 C 0.12 0.02 4.29 45.51 0.20 0.22 16 12 H 0.09 0.37 7.53 -2.39 -0.02 0.36 16 13 N -0.69 -0.50 5.25 -443.99 -2.33 -2.83 16 14 C 0.59 4.96 7.77 86.45 0.67 5.63 16 15 O -0.59 -9.30 14.18 -4.34 -0.06 -9.36 16 16 C -0.09 -0.63 6.89 40.35 0.28 -0.35 16 17 C -0.12 -0.07 10.35 22.57 0.23 0.16 16 18 C -0.21 0.06 9.37 22.01 0.21 0.26 16 19 C 0.04 0.16 6.18 41.34 0.26 0.41 16 20 C -0.07 0.11 2.98 71.24 0.21 0.32 16 21 O -0.56 -0.13 9.79 -148.98 -1.46 -1.59 16 22 Si 0.81 -3.20 31.10 68.60 2.13 -1.07 16 23 N -0.41 -3.32 3.16 -519.71 -1.64 -4.96 16 24 C 0.06 0.49 10.30 127.77 1.32 1.81 16 25 C -0.12 0.48 7.29 31.12 0.23 0.70 16 26 C -0.16 -0.64 9.65 22.37 0.22 -0.42 16 27 H 0.06 -0.24 7.66 -2.39 -0.02 -0.25 16 28 H 0.06 -0.22 7.66 -2.39 -0.02 -0.23 16 29 H 0.12 -0.62 8.14 -2.39 -0.02 -0.64 16 30 H 0.14 -0.14 6.30 -2.91 -0.02 -0.15 16 31 H 0.14 -0.45 8.06 -2.91 -0.02 -0.47 16 32 H 0.14 -0.37 6.65 -2.91 -0.02 -0.39 16 33 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 34 H 0.10 -0.12 6.31 -2.38 -0.02 -0.14 16 35 H 0.42 -2.18 7.60 -92.70 -0.70 -2.88 16 36 H 0.18 -1.23 7.45 -2.91 -0.02 -1.26 16 37 H 0.19 -1.47 6.85 -2.91 -0.02 -1.49 16 38 H 0.10 -0.58 7.96 -2.39 -0.02 -0.59 16 39 H 0.40 -3.27 8.74 -74.06 -0.65 -3.92 16 40 H -0.31 -1.72 7.11 99.48 0.71 -1.01 16 41 H -0.28 0.19 7.11 99.48 0.71 0.90 16 42 H 0.07 0.45 8.14 -2.39 -0.02 0.43 16 43 H 0.11 0.69 5.48 -2.38 -0.01 0.68 16 44 H 0.08 0.98 5.93 -2.38 -0.01 0.97 16 45 H 0.10 -0.45 7.72 -2.39 -0.02 -0.47 16 46 H 0.09 -0.53 8.14 -2.38 -0.02 -0.55 16 47 H 0.13 0.27 8.05 -2.91 -0.02 0.24 16 Total: 0.00 -24.41 380.48 1.14 -23.26 By element: Atomic # 1 Polarization: -11.01 SS G_CDS: -0.30 Total: -11.31 kcal Atomic # 6 Polarization: 4.91 SS G_CDS: 5.77 Total: 10.68 kcal Atomic # 7 Polarization: -3.81 SS G_CDS: -3.97 Total: -7.79 kcal Atomic # 8 Polarization: -11.30 SS G_CDS: -2.49 Total: -13.79 kcal Atomic # 14 Polarization: -3.20 SS G_CDS: 2.13 Total: -1.07 kcal Total: -24.41 1.14 -23.26 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_10803936.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.182 kcal (2) G-P(sol) polarization free energy of solvation -24.408 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.774 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.145 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.263 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.919 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds