Wall clock time and date at job start Sat Mar 6 2021 14:37:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35899 * 116.99930 * 2 1 4 4 C 1.38708 * 120.05461 * 180.02562 * 3 2 1 5 5 C 1.38163 * 119.94499 * 179.97438 * 4 3 2 6 6 C 1.50703 * 119.97220 * 180.02562 * 5 4 3 7 7 H 1.08997 * 112.85134 * 11.19646 * 6 5 4 8 8 C 1.53778 * 113.61265 * 142.50731 * 6 5 4 9 9 C 1.53781 * 87.08391 * 139.98150 * 8 6 5 10 10 H 1.08999 * 113.69554 * 220.00761 * 9 8 6 11 11 N 1.46500 * 113.61441 * 89.11037 * 9 8 6 12 12 C 1.34781 * 119.99621 * 107.50921 * 11 9 8 13 13 O 1.21717 * 120.00090 * 359.97438 * 12 11 9 14 14 C 1.46561 * 119.99832 * 180.02562 * 12 11 9 15 15 C 1.40856 * 126.58048 * 179.97438 * 14 12 11 16 16 C 1.40093 * 132.86600 * 0.02562 * 15 14 12 17 17 C 1.36449 * 119.25455 * 179.97438 * 16 15 14 18 18 C 1.50707 * 120.29241 * 179.97438 * 17 16 15 19 19 O 1.42891 * 109.47117 * 239.97847 * 18 17 16 20 20 Si 1.86295 * 109.46714 * 119.98011 * 18 17 16 21 21 C 1.40156 * 119.41008 * 359.97438 * 17 16 15 22 22 C 1.35187 * 120.32059 * 0.04049 * 21 17 16 23 23 N 1.36241 * 120.70171 * 359.95800 * 22 21 17 24 24 N 1.40024 * 132.00866 * 180.02562 * 23 22 21 25 25 C 1.30739 * 109.60128 * 179.69693 * 24 23 22 26 26 C 1.53781 * 113.61489 * 240.00441 * 6 5 4 27 27 C 1.38243 * 120.05438 * 0.02562 * 5 4 3 28 28 C 1.38289 * 120.11362 * 359.97438 * 27 5 4 29 29 C 1.38125 * 120.05159 * 0.02562 * 28 27 5 30 30 H 1.08998 * 109.46876 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47294 * 300.00489 * 1 2 3 32 32 H 1.08995 * 109.47056 * 60.00501 * 1 2 3 33 33 H 1.08001 * 120.02776 * 359.97438 * 4 3 2 34 34 H 1.09006 * 113.61374 * 254.53001 * 8 6 5 35 35 H 1.08999 * 113.61641 * 25.43088 * 8 6 5 36 36 H 0.96992 * 120.00651 * 287.50684 * 11 9 8 37 37 H 1.07998 * 120.37010 * 359.97438 * 16 15 14 38 38 H 1.09000 * 109.47332 * 359.97438 * 18 17 16 39 39 H 0.96701 * 114.00581 * 300.00093 * 19 18 17 40 40 H 1.48507 * 110.00263 * 58.68053 * 20 18 17 41 41 H 1.48503 * 110.00287 * 179.97438 * 20 18 17 42 42 H 1.07997 * 119.83866 * 180.02562 * 21 17 16 43 43 H 1.07996 * 119.65026 * 179.97438 * 22 21 17 44 44 H 1.08006 * 125.62664 * 180.24581 * 25 24 23 45 45 H 1.09003 * 113.61545 * 334.56604 * 26 6 5 46 46 H 1.08996 * 113.62038 * 105.38405 * 26 6 5 47 47 H 1.08004 * 119.94070 * 180.02562 * 27 5 4 48 48 H 1.07993 * 119.96940 * 180.28495 * 28 27 5 49 49 H 1.08000 * 120.02328 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 -0.0005 5 6 4.0560 2.5171 -0.0011 6 6 5.5608 2.5981 -0.0022 7 1 6.0363 1.6370 -0.1976 8 6 6.1151 3.7475 -0.8603 9 6 7.1517 3.9740 0.2528 10 1 7.3487 5.0257 0.4605 11 7 8.3766 3.1886 0.0827 12 6 9.5207 3.7965 -0.2889 13 8 9.5361 4.9979 -0.4836 14 6 10.7460 3.0107 -0.4596 15 6 12.0104 3.4997 -0.8419 16 6 12.4810 4.7808 -1.1580 17 6 13.7919 4.9441 -1.4995 18 6 14.3229 6.3117 -1.8445 19 8 14.8322 6.3021 -3.1795 20 14 15.6895 6.7636 -0.6617 21 6 14.6402 3.8287 -1.5266 22 6 14.1642 2.6016 -1.2180 23 7 12.8569 2.4285 -0.8758 24 7 12.1246 1.2896 -0.5190 25 6 10.8864 1.6254 -0.2674 26 6 6.1390 3.3347 1.2176 27 6 3.3019 3.6757 -0.0005 28 6 1.9209 3.6047 0.0000 29 6 1.2914 2.3752 0.0005 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5139 0.8899 32 1 -0.3633 0.5137 -0.8900 33 1 4.0206 0.3799 -0.0005 34 1 6.5518 3.4174 -1.8030 35 1 5.4179 4.5764 -0.9830 36 1 8.3643 2.2312 0.2376 37 1 11.8137 5.6295 -1.1318 38 1 13.5189 7.0437 -1.7677 39 1 15.5522 5.6723 -3.3214 40 1 16.7778 5.7558 -0.7339 41 1 16.2222 8.1100 -0.9916 42 1 15.6791 3.9501 -1.7955 43 1 14.8273 1.7496 -1.2428 44 1 10.1001 0.9493 0.0347 45 1 5.4484 4.0507 1.6631 46 1 6.5936 2.6713 1.9533 47 1 3.7923 4.6380 -0.0014 48 1 1.3341 4.5113 -0.0042 49 1 0.2128 2.3203 0.0014 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_11618758.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:37:47 Heat of formation + Delta-G solvation = 61.034214 kcal Electronic energy + Delta-G solvation = -32994.101721 eV Core-core repulsion = 28470.127457 eV Total energy + Delta-G solvation = -4523.974264 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.157 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -43.31482 -41.57026 -40.73026 -39.61352 -39.22309 -37.81050 -37.31244 -34.49397 -34.12047 -32.14506 -32.09038 -31.03980 -30.14389 -28.22952 -27.38212 -26.63069 -26.05302 -24.93790 -23.88495 -23.52070 -23.07045 -22.22122 -21.36923 -20.20818 -19.19229 -18.67452 -18.59051 -17.89403 -17.49503 -17.22035 -17.03244 -16.92277 -16.80546 -16.66065 -16.44227 -15.99115 -15.83197 -15.63637 -15.47205 -15.35242 -14.87916 -14.66304 -14.42477 -14.25605 -14.20862 -13.94892 -13.81397 -13.49430 -13.43095 -13.24430 -13.22343 -13.14031 -12.65135 -12.46907 -12.26787 -12.11781 -12.07814 -11.89493 -11.61514 -11.59886 -11.53017 -11.20467 -10.95632 -10.88340 -10.32261 -10.04110 -9.72369 -9.13861 -8.79457 -4.88500 -0.56070 -0.13669 0.34731 0.49600 1.02415 1.03249 1.21954 1.60502 1.89619 2.08553 2.21721 2.36512 2.49558 2.75963 3.08780 3.23752 3.37215 3.52236 3.54984 3.71176 3.75554 3.78789 3.87161 3.89719 3.97551 4.02466 4.12690 4.19221 4.21286 4.29261 4.35249 4.35768 4.40220 4.41204 4.56754 4.58243 4.66193 4.71151 4.71849 4.78113 4.83479 4.94538 5.01381 5.07561 5.10661 5.13175 5.16300 5.22665 5.28900 5.36075 5.51405 5.61424 5.65437 5.75338 5.84525 6.28782 6.45042 6.46492 6.62877 7.32275 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.166 4.166 5 C -0.033 4.033 6 C -0.068 4.068 7 H 0.110 0.890 8 C -0.142 4.142 9 C 0.121 3.879 10 H 0.089 0.911 11 N -0.698 5.698 12 C 0.602 3.398 13 O -0.588 6.588 14 C -0.340 4.340 15 C 0.153 3.847 16 C -0.115 4.115 17 C -0.051 4.051 18 C -0.085 4.085 19 O -0.542 6.542 20 Si 0.768 3.232 21 C -0.157 4.157 22 C 0.117 3.883 23 N -0.274 5.274 24 N -0.340 5.340 25 C 0.131 3.869 26 C -0.122 4.122 27 C -0.160 4.160 28 C -0.084 4.084 29 C -0.222 4.222 30 H 0.115 0.885 31 H 0.063 0.937 32 H 0.062 0.938 33 H 0.132 0.868 34 H 0.064 0.936 35 H 0.099 0.901 36 H 0.413 0.587 37 H 0.152 0.848 38 H 0.124 0.876 39 H 0.390 0.610 40 H -0.254 1.254 41 H -0.293 1.293 42 H 0.190 0.810 43 H 0.205 0.795 44 H 0.234 0.766 45 H 0.102 0.898 46 H 0.088 0.912 47 H 0.139 0.861 48 H 0.143 0.857 49 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.711 -1.994 2.850 3.550 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.184 4.184 5 C -0.033 4.033 6 C -0.086 4.086 7 H 0.128 0.872 8 C -0.180 4.180 9 C 0.016 3.984 10 H 0.108 0.892 11 N -0.349 5.349 12 C 0.392 3.608 13 O -0.470 6.470 14 C -0.354 4.354 15 C 0.031 3.969 16 C -0.135 4.135 17 C -0.057 4.057 18 C -0.192 4.192 19 O -0.350 6.350 20 Si 0.669 3.331 21 C -0.178 4.178 22 C -0.009 4.009 23 N -0.038 5.038 24 N -0.160 5.160 25 C -0.050 4.050 26 C -0.160 4.160 27 C -0.178 4.178 28 C -0.102 4.102 29 C -0.241 4.241 30 H 0.133 0.867 31 H 0.082 0.918 32 H 0.081 0.919 33 H 0.150 0.850 34 H 0.083 0.917 35 H 0.117 0.883 36 H 0.250 0.750 37 H 0.170 0.830 38 H 0.141 0.859 39 H 0.240 0.760 40 H -0.178 1.178 41 H -0.220 1.220 42 H 0.207 0.793 43 H 0.222 0.778 44 H 0.250 0.750 45 H 0.121 0.879 46 H 0.107 0.893 47 H 0.157 0.843 48 H 0.160 0.840 49 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 1.932 -1.821 2.708 3.793 hybrid contribution -0.901 -0.258 -1.096 1.442 sum 1.031 -2.079 1.613 2.826 Atomic orbital electron populations 1.23287 0.76690 1.05356 1.02090 1.86039 1.23253 1.27332 1.88813 1.19292 0.92856 0.84616 0.96838 1.20509 0.91446 0.98884 1.07582 1.19636 0.95604 0.91831 0.96275 1.21619 0.89799 0.99533 0.97632 0.87237 1.23561 0.97967 0.98750 0.97733 1.21793 0.83181 0.96431 0.97026 0.89245 1.45240 1.07713 1.12031 1.69897 1.16980 0.82531 0.86021 0.75266 1.90754 1.86256 1.16110 1.53871 1.19684 0.93778 0.94626 1.27346 1.19550 0.90784 0.89277 0.97246 1.20664 0.96067 0.94865 1.01875 1.20568 0.93050 0.97222 0.94861 1.25301 1.07920 0.94945 0.91032 1.86679 1.56106 1.65320 1.26941 0.93437 0.75638 0.77771 0.86297 1.21092 1.02802 0.89721 1.04156 1.22179 0.81293 1.01165 0.96222 1.46306 1.08513 1.06581 1.42395 1.77576 1.06158 1.03954 1.28339 1.24602 0.94536 0.93996 0.91861 1.23366 0.96864 0.99841 0.95943 1.21181 0.93793 0.98813 1.04058 1.21240 0.95013 0.97533 0.96426 1.21480 1.00896 0.92439 1.09292 0.86694 0.91816 0.91947 0.85003 0.91678 0.88279 0.75043 0.83020 0.85862 0.75962 1.17833 1.22041 0.79289 0.77838 0.75043 0.87913 0.89298 0.84284 0.83952 0.84326 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.08 16 2 O -0.34 -1.96 10.50 -92.41 -0.97 -2.93 16 3 C 0.11 0.60 6.69 22.50 0.15 0.75 16 4 C -0.17 -0.67 9.65 22.36 0.22 -0.45 16 5 C -0.03 -0.04 5.29 -19.88 -0.11 -0.14 16 6 C -0.07 0.19 3.86 -11.01 -0.04 0.15 16 7 H 0.11 -0.54 8.09 -2.39 -0.02 -0.56 16 8 C -0.14 0.12 7.25 31.12 0.23 0.35 16 9 C 0.12 -0.04 4.32 45.52 0.20 0.16 16 10 H 0.09 0.33 7.46 -2.39 -0.02 0.31 16 11 N -0.70 0.16 5.25 -444.08 -2.33 -2.17 16 12 C 0.60 4.22 7.78 86.41 0.67 4.89 16 13 O -0.59 -8.41 15.30 -4.40 -0.07 -8.48 16 14 C -0.34 -1.90 6.17 -19.90 -0.12 -2.02 16 15 C 0.15 0.97 6.76 39.50 0.27 1.24 16 16 C -0.11 -0.49 9.35 22.30 0.21 -0.28 16 17 C -0.05 0.07 4.53 -19.81 -0.09 -0.02 16 18 C -0.08 0.21 2.84 71.24 0.20 0.42 16 19 O -0.54 0.13 12.87 -148.98 -1.92 -1.79 16 20 Si 0.77 -3.83 31.97 68.60 2.19 -1.64 16 21 C -0.16 0.87 8.38 22.03 0.18 1.05 16 22 C 0.12 -0.36 11.18 83.30 0.93 0.58 16 23 N -0.27 -1.07 3.86 -187.28 -0.72 -1.79 16 24 N -0.34 -1.66 12.57 -56.61 -0.71 -2.37 16 25 C 0.13 0.14 11.44 85.42 0.98 1.11 16 26 C -0.12 0.50 7.29 31.12 0.23 0.72 16 27 C -0.16 -0.10 8.61 22.28 0.19 0.09 16 28 C -0.08 -0.09 10.04 22.25 0.22 0.14 16 29 C -0.22 -0.61 9.04 22.36 0.20 -0.41 16 30 H 0.11 -0.59 8.14 -2.39 -0.02 -0.61 16 31 H 0.06 -0.22 7.66 -2.39 -0.02 -0.24 16 32 H 0.06 -0.21 7.66 -2.39 -0.02 -0.22 16 33 H 0.13 0.30 8.05 -2.91 -0.02 0.27 16 34 H 0.06 0.10 8.14 -2.38 -0.02 0.08 16 35 H 0.10 -0.15 6.31 -2.39 -0.02 -0.16 16 36 H 0.41 -2.64 7.62 -92.71 -0.71 -3.34 16 37 H 0.15 0.95 7.01 -2.91 -0.02 0.93 16 38 H 0.12 -0.27 7.71 -2.39 -0.02 -0.29 16 39 H 0.39 -3.25 8.08 -74.06 -0.60 -3.85 16 40 H -0.25 1.16 7.05 99.48 0.70 1.86 16 41 H -0.29 -0.85 7.11 99.48 0.71 -0.15 16 42 H 0.19 -2.39 7.26 -2.91 -0.02 -2.41 16 43 H 0.20 -1.92 8.06 -2.91 -0.02 -1.94 16 44 H 0.23 -1.97 7.46 -2.91 -0.02 -1.99 16 45 H 0.10 -0.44 7.72 -2.39 -0.02 -0.46 16 46 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 47 H 0.14 -0.38 6.65 -2.91 -0.02 -0.40 16 48 H 0.14 -0.46 8.06 -2.91 -0.02 -0.48 16 49 H 0.14 -0.12 6.30 -2.91 -0.02 -0.14 16 Total: 0.00 -27.14 408.35 1.05 -26.09 By element: Atomic # 1 Polarization: -14.08 SS G_CDS: -0.25 Total: -14.33 kcal Atomic # 6 Polarization: 3.58 SS G_CDS: 5.83 Total: 9.40 kcal Atomic # 7 Polarization: -2.57 SS G_CDS: -3.77 Total: -6.34 kcal Atomic # 8 Polarization: -10.23 SS G_CDS: -2.96 Total: -13.19 kcal Atomic # 14 Polarization: -3.83 SS G_CDS: 2.19 Total: -1.64 kcal Total: -27.14 1.05 -26.09 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_11618758.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.124 kcal (2) G-P(sol) polarization free energy of solvation -27.137 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.987 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.047 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.089 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.034 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds