Wall clock time and date at job start Sat Mar 6 2021 14:37:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35894 * 117.00233 * 2 1 4 4 C 1.38717 * 120.05728 * 180.24816 * 3 2 1 5 5 C 1.38162 * 119.94207 * 180.20970 * 4 3 2 6 6 C 1.50703 * 119.96633 * 179.79258 * 5 4 3 7 7 H 1.08993 * 112.85454 * 348.52754 * 6 5 4 8 8 C 1.53776 * 113.61229 * 119.72858 * 6 5 4 9 9 C 1.53782 * 87.08098 * 140.06140 * 8 6 5 10 10 H 1.09001 * 113.61064 * 219.92792 * 9 8 6 11 11 N 1.46495 * 113.61469 * 89.11646 * 9 8 6 12 12 C 1.34774 * 120.00218 * 156.52786 * 11 9 8 13 13 O 1.21619 * 120.00117 * 0.02562 * 12 11 9 14 14 C 1.47307 * 120.00180 * 179.97438 * 12 11 9 15 15 C 1.40292 * 120.13532 * 179.97438 * 14 12 11 16 16 O 1.35658 * 120.12133 * 0.02562 * 15 14 12 17 17 C 1.42903 * 117.00276 * 179.72691 * 16 15 14 18 18 C 1.38445 * 119.76003 * 179.72529 * 15 14 12 19 19 C 1.38679 * 120.02889 * 0.29675 * 18 15 14 20 20 O 1.35719 * 119.86219 * 179.97438 * 19 18 15 21 21 C 1.42901 * 116.99957 * 0.02562 * 20 19 18 22 22 C 1.39190 * 120.27537 * 359.97438 * 19 18 15 23 23 C 1.50696 * 119.87599 * 179.97438 * 22 19 18 24 24 O 1.42902 * 109.47361 * 75.00669 * 23 22 19 25 25 Si 1.86306 * 109.47097 * 195.00137 * 23 22 19 26 26 C 1.37535 * 120.23835 * 359.97438 * 22 19 18 27 27 C 1.53776 * 87.17452 * 334.52188 * 9 8 6 28 28 C 1.38242 * 120.05888 * 359.51786 * 5 4 3 29 29 C 1.38290 * 120.11040 * 0.27859 * 28 5 4 30 30 C 1.38122 * 120.05508 * 359.95273 * 29 28 5 31 31 H 1.08997 * 109.47208 * 299.99973 * 1 2 3 32 32 H 1.09001 * 109.46836 * 60.00017 * 1 2 3 33 33 H 1.08998 * 109.47639 * 179.97438 * 1 2 3 34 34 H 1.08006 * 120.02315 * 359.97438 * 4 3 2 35 35 H 1.08999 * 113.61519 * 25.51095 * 8 6 5 36 36 H 1.09004 * 113.68820 * 254.62019 * 8 6 5 37 37 H 0.97000 * 120.00406 * 336.52927 * 11 9 8 38 38 H 1.09002 * 109.47382 * 179.97438 * 17 16 15 39 39 H 1.09001 * 109.46938 * 59.99682 * 17 16 15 40 40 H 1.09004 * 109.46926 * 299.99803 * 17 16 15 41 41 H 1.08001 * 119.98515 * 180.27516 * 18 15 14 42 42 H 1.08999 * 109.46939 * 300.00142 * 21 20 19 43 43 H 1.08995 * 109.47328 * 59.99860 * 21 20 19 44 44 H 1.08996 * 109.47078 * 180.02562 * 21 20 19 45 45 H 1.08994 * 109.47822 * 315.00255 * 23 22 19 46 46 H 0.96693 * 114.00531 * 179.97438 * 24 23 22 47 47 H 1.48498 * 110.00064 * 178.68254 * 25 23 22 48 48 H 1.48502 * 109.99969 * 300.00372 * 25 23 22 49 49 H 1.08004 * 120.01374 * 179.97438 * 26 22 19 50 50 H 1.09002 * 113.61167 * 140.01855 * 27 9 8 51 51 H 1.09003 * 113.61751 * 270.92903 * 27 9 8 52 52 H 1.07997 * 119.94411 * 180.24996 * 28 5 4 53 53 H 1.07994 * 119.97209 * 179.97438 * 29 28 5 54 54 H 1.08002 * 120.02779 * 180.02562 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4312 1.2847 -0.0052 5 6 4.0560 2.5170 -0.0008 6 6 5.5609 2.5979 -0.0017 7 1 6.0366 1.6370 0.1938 8 6 6.1374 3.3336 -1.2228 9 6 7.1528 3.9719 -0.2603 10 1 7.3506 5.0233 -0.4687 11 7 8.3771 3.1851 -0.0926 12 6 9.5153 3.7866 0.3064 13 8 9.5259 4.9824 0.5277 14 6 10.7463 2.9954 0.4756 15 6 11.9328 3.6187 0.8903 16 8 11.9507 4.9524 1.1375 17 6 13.1929 5.5170 1.5620 18 6 13.0838 2.8666 1.0523 19 6 13.0634 1.5033 0.7991 20 8 14.1938 0.7693 0.9586 21 6 15.3646 1.4665 1.3892 22 6 11.8884 0.8845 0.3822 23 6 11.8765 -0.5975 0.1091 24 8 11.8894 -1.3103 1.3476 25 14 10.3397 -1.0406 -0.8464 26 6 10.7382 1.6207 0.2186 27 6 6.1194 3.7490 0.8565 28 6 3.3021 3.6757 -0.0013 29 6 1.9210 3.6047 -0.0004 30 6 1.2915 2.3753 0.0001 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3634 -1.0276 -0.0005 34 1 4.0207 0.3797 -0.0088 35 1 5.4467 4.0503 -1.6671 36 1 6.5912 2.6706 -1.9595 37 1 8.3687 2.2313 -0.2687 38 1 13.0689 6.5877 1.7242 39 1 13.9486 5.3512 0.7942 40 1 13.5089 5.0426 2.4912 41 1 13.9981 3.3419 1.3757 42 1 15.6164 2.2379 0.6615 43 1 15.1764 1.9287 2.3582 44 1 16.1940 0.7647 1.4760 45 1 12.7571 -0.8666 -0.4741 46 1 11.8823 -2.2721 1.2480 47 1 10.3317 -2.4942 -1.1497 48 1 9.1319 -0.6787 -0.0619 49 1 9.8286 1.1369 -0.1054 50 1 6.5586 3.4199 1.7983 51 1 5.4237 4.5790 0.9797 52 1 3.7924 4.6379 -0.0019 53 1 1.3341 4.5113 -0.0004 54 1 0.2129 2.3203 0.0004 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_12297780.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:37:55 Heat of formation + Delta-G solvation = -80.271190 kcal Electronic energy + Delta-G solvation = -37686.839128 eV Core-core repulsion = 32751.139501 eV Total energy + Delta-G solvation = -4935.699627 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.181 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -42.13822 -41.51361 -40.75946 -40.09965 -39.40018 -38.40124 -37.82583 -37.14878 -34.50722 -32.40044 -32.25767 -31.62293 -30.77732 -28.97217 -28.26611 -28.16774 -26.66279 -26.23807 -25.98807 -24.57324 -23.57224 -22.96016 -22.16934 -21.57231 -20.31029 -19.92138 -18.89255 -18.54802 -18.52360 -18.08412 -17.32184 -17.22424 -17.08503 -16.93631 -16.70088 -16.67328 -16.53102 -16.38072 -16.01164 -15.76451 -15.68905 -15.57596 -15.45720 -15.02489 -14.45944 -14.39592 -14.29835 -14.12437 -13.97140 -13.86251 -13.72236 -13.51825 -13.40432 -13.24192 -13.14318 -12.78921 -12.66577 -12.53363 -12.50098 -12.28426 -12.14034 -12.09670 -11.89868 -11.64542 -11.62750 -11.56060 -11.22458 -10.95179 -10.41431 -10.10306 -9.91656 -9.74295 -9.19468 -9.14834 -4.92711 -0.26033 0.07422 0.33128 0.48197 1.29435 1.58743 1.71582 1.92940 2.07362 2.11633 2.18346 2.35043 2.57711 2.74399 3.33153 3.46836 3.53758 3.67313 3.70750 3.72925 3.77978 3.86730 3.88148 3.97939 4.08310 4.11619 4.17774 4.19505 4.24084 4.27919 4.28828 4.29252 4.31394 4.34427 4.39366 4.44487 4.54995 4.63728 4.64268 4.68116 4.70326 4.70623 4.76847 4.81365 4.86057 4.95147 4.98696 5.04532 5.04891 5.10642 5.18511 5.29338 5.34469 5.49818 5.57549 5.72221 5.83064 6.03245 6.28691 6.43772 6.51618 6.64387 7.23798 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.341 6.341 3 C 0.110 3.890 4 C -0.167 4.167 5 C -0.033 4.033 6 C -0.071 4.071 7 H 0.103 0.897 8 C -0.121 4.121 9 C 0.119 3.881 10 H 0.092 0.908 11 N -0.704 5.704 12 C 0.568 3.432 13 O -0.560 6.560 14 C -0.228 4.228 15 C 0.219 3.781 16 O -0.303 6.303 17 C 0.010 3.990 18 C -0.310 4.310 19 C 0.215 3.785 20 O -0.312 6.312 21 C 0.011 3.989 22 C -0.162 4.162 23 C -0.073 4.073 24 O -0.556 6.556 25 Si 0.754 3.246 26 C 0.000 4.000 27 C -0.142 4.142 28 C -0.159 4.159 29 C -0.083 4.083 30 C -0.221 4.221 31 H 0.062 0.938 32 H 0.064 0.936 33 H 0.115 0.885 34 H 0.129 0.871 35 H 0.108 0.892 36 H 0.093 0.907 37 H 0.408 0.592 38 H 0.114 0.886 39 H 0.074 0.926 40 H 0.069 0.931 41 H 0.166 0.834 42 H 0.073 0.927 43 H 0.064 0.936 44 H 0.121 0.879 45 H 0.084 0.916 46 H 0.392 0.608 47 H -0.283 1.283 48 H -0.272 1.272 49 H 0.157 0.843 50 H 0.061 0.939 51 H 0.103 0.897 52 H 0.141 0.859 53 H 0.144 0.856 54 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.949 -1.596 -3.251 4.112 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.255 6.255 3 C 0.065 3.935 4 C -0.186 4.186 5 C -0.033 4.033 6 C -0.090 4.090 7 H 0.121 0.879 8 C -0.158 4.158 9 C 0.013 3.987 10 H 0.110 0.890 11 N -0.356 5.356 12 C 0.357 3.643 13 O -0.439 6.439 14 C -0.232 4.232 15 C 0.170 3.830 16 O -0.214 6.214 17 C -0.085 4.085 18 C -0.330 4.330 19 C 0.167 3.833 20 O -0.223 6.223 21 C -0.083 4.083 22 C -0.163 4.163 23 C -0.181 4.181 24 O -0.365 6.365 25 Si 0.657 3.343 26 C -0.019 4.019 27 C -0.181 4.181 28 C -0.177 4.177 29 C -0.101 4.101 30 C -0.240 4.240 31 H 0.081 0.919 32 H 0.083 0.917 33 H 0.133 0.867 34 H 0.147 0.853 35 H 0.126 0.874 36 H 0.111 0.889 37 H 0.246 0.754 38 H 0.132 0.868 39 H 0.093 0.907 40 H 0.087 0.913 41 H 0.183 0.817 42 H 0.092 0.908 43 H 0.083 0.917 44 H 0.139 0.861 45 H 0.102 0.898 46 H 0.242 0.758 47 H -0.209 1.209 48 H -0.198 1.198 49 H 0.174 0.826 50 H 0.080 0.920 51 H 0.121 0.879 52 H 0.158 0.842 53 H 0.162 0.838 54 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 1.221 -0.852 -2.912 3.270 hybrid contribution 0.544 -1.100 1.197 1.714 sum 1.765 -1.952 -1.715 3.141 Atomic orbital electron populations 1.23292 0.76643 1.05365 1.02130 1.86037 1.23297 1.27334 1.88807 1.19275 0.92756 0.84674 0.96814 1.20492 0.91535 0.98804 1.07781 1.19597 0.95386 0.91923 0.96381 1.21667 0.90042 0.99313 0.97943 0.87897 1.23376 0.96724 0.99905 0.95831 1.21841 0.83104 0.96501 0.97223 0.88974 1.45498 1.08581 1.12419 1.69150 1.17994 0.83351 0.86713 0.76257 1.90810 1.85659 1.16031 1.51441 1.19110 0.93047 0.94098 1.16961 1.18945 0.92295 0.83351 0.88425 1.86364 1.36536 1.18569 1.79898 1.23488 0.84103 1.00542 1.00325 1.21417 1.00296 0.93990 1.17262 1.18899 0.86721 0.88906 0.88823 1.86113 1.17673 1.37606 1.80914 1.23481 0.84910 0.99673 1.00194 1.18585 0.91681 0.95264 1.10804 1.24829 1.12381 0.89683 0.91191 1.86567 1.96522 1.23829 1.29612 0.94419 0.74016 0.81203 0.84699 1.20937 0.97303 0.91023 0.92595 1.23623 0.98044 0.98814 0.97619 1.21174 0.93810 0.98729 1.03992 1.21248 0.94949 0.97567 0.96299 1.21485 1.00919 0.92380 1.09210 0.91933 0.91739 0.86705 0.85306 0.87414 0.88876 0.75446 0.86796 0.90731 0.91277 0.81701 0.90815 0.91709 0.86067 0.89763 0.75794 1.20925 1.19838 0.82578 0.91971 0.87917 0.84179 0.83801 0.84211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 113.37 1.11 1.08 16 2 O -0.34 -2.16 10.50 -92.36 -0.97 -3.13 16 3 C 0.11 0.68 6.69 22.51 0.15 0.83 16 4 C -0.17 -0.87 9.65 22.37 0.22 -0.65 16 5 C -0.03 -0.07 5.29 -19.88 -0.11 -0.18 16 6 C -0.07 0.07 3.86 -10.92 -0.04 0.02 16 7 H 0.10 -0.21 8.09 -2.39 -0.02 -0.23 16 8 C -0.12 0.37 7.29 31.12 0.23 0.60 16 9 C 0.12 0.17 4.29 45.52 0.20 0.36 16 10 H 0.09 0.45 7.50 -2.39 -0.02 0.44 16 11 N -0.70 -1.79 5.21 -443.43 -2.31 -4.10 16 12 C 0.57 5.43 7.76 86.63 0.67 6.10 16 13 O -0.56 -9.76 14.77 16.88 0.25 -9.51 16 14 C -0.23 -1.65 5.89 -20.00 -0.12 -1.77 16 15 C 0.22 1.66 6.70 22.82 0.15 1.82 16 16 O -0.30 -2.81 8.56 -68.77 -0.59 -3.40 16 17 C 0.01 -0.01 9.81 113.37 1.11 1.11 16 18 C -0.31 -0.95 8.01 22.42 0.18 -0.77 16 19 C 0.21 0.89 6.67 22.60 0.15 1.04 16 20 O -0.31 -0.84 9.80 -90.40 -0.89 -1.73 16 21 C 0.01 -0.06 9.80 113.37 1.11 1.06 16 22 C -0.16 -0.58 5.30 -19.80 -0.11 -0.69 16 23 C -0.07 -0.04 2.36 71.23 0.17 0.13 16 24 O -0.56 -1.89 12.86 -148.98 -1.92 -3.80 16 25 Si 0.75 -2.48 30.19 68.60 2.07 -0.41 16 26 C 0.00 0.00 8.14 22.49 0.18 0.18 16 27 C -0.14 -0.14 7.27 31.21 0.23 0.09 16 28 C -0.16 -0.19 8.61 22.28 0.19 0.01 16 29 C -0.08 -0.11 10.04 22.25 0.22 0.11 16 30 C -0.22 -0.69 9.04 22.37 0.20 -0.48 16 31 H 0.06 -0.18 7.66 -2.39 -0.02 -0.20 16 32 H 0.06 -0.21 7.66 -2.39 -0.02 -0.23 16 33 H 0.11 -0.55 8.14 -2.39 -0.02 -0.57 16 34 H 0.13 0.50 8.06 -2.91 -0.02 0.48 16 35 H 0.11 -0.44 7.72 -2.39 -0.02 -0.46 16 36 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 37 H 0.41 -1.06 6.72 -92.71 -0.62 -1.68 16 38 H 0.11 -0.31 8.14 -2.39 -0.02 -0.32 16 39 H 0.07 -0.33 7.66 -2.39 -0.02 -0.35 16 40 H 0.07 -0.24 7.66 -2.38 -0.02 -0.26 16 41 H 0.17 -0.41 4.50 -2.91 -0.01 -0.42 16 42 H 0.07 -0.56 7.65 -2.39 -0.02 -0.58 16 43 H 0.06 -0.38 7.65 -2.39 -0.02 -0.40 16 44 H 0.12 -0.99 8.14 -2.39 -0.02 -1.01 16 45 H 0.08 -0.12 7.82 -2.39 -0.02 -0.14 16 46 H 0.39 -1.79 8.74 -74.06 -0.65 -2.44 16 47 H -0.28 -0.30 7.11 99.48 0.71 0.40 16 48 H -0.27 -0.02 6.74 99.48 0.67 0.65 16 49 H 0.16 -0.37 3.20 -2.91 -0.01 -0.38 16 50 H 0.06 0.24 8.14 -2.39 -0.02 0.22 16 51 H 0.10 -0.04 6.32 -2.39 -0.02 -0.05 16 52 H 0.14 -0.33 6.66 -2.91 -0.02 -0.35 16 53 H 0.14 -0.45 8.06 -2.91 -0.02 -0.47 16 54 H 0.14 -0.09 6.30 -2.91 -0.02 -0.11 16 Total: 0.00 -26.51 434.34 1.46 -25.06 By element: Atomic # 1 Polarization: -8.68 SS G_CDS: -0.30 Total: -8.97 kcal Atomic # 6 Polarization: 3.89 SS G_CDS: 6.11 Total: 9.99 kcal Atomic # 7 Polarization: -1.79 SS G_CDS: -2.31 Total: -4.10 kcal Atomic # 8 Polarization: -17.45 SS G_CDS: -4.11 Total: -21.56 kcal Atomic # 14 Polarization: -2.48 SS G_CDS: 2.07 Total: -0.41 kcal Total: -26.51 1.46 -25.06 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_12297780.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.216 kcal (2) G-P(sol) polarization free energy of solvation -26.514 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.730 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.459 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.056 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.271 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds