Wall clock time and date at job start Sat Mar 6 2021 14:38:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35900 * 116.99943 * 2 1 4 4 C 1.38707 * 120.05163 * 180.02562 * 3 2 1 5 5 C 1.38166 * 119.94172 * 179.97438 * 4 3 2 6 6 C 1.50701 * 119.97212 * 180.02562 * 5 4 3 7 7 H 1.09002 * 112.85271 * 350.32798 * 6 5 4 8 8 C 1.53784 * 113.61740 * 121.52963 * 6 5 4 9 9 C 1.53780 * 87.07983 * 139.98125 * 8 6 5 10 10 H 1.09001 * 113.61110 * 220.01493 * 9 8 6 11 11 N 1.46500 * 113.61535 * 89.20484 * 9 8 6 12 12 C 1.34778 * 120.00098 * 154.99380 * 11 9 8 13 13 O 1.21564 * 119.99842 * 0.02562 * 12 11 9 14 14 C 1.47693 * 119.99598 * 179.97438 * 12 11 9 15 15 C 1.39826 * 120.16238 * 180.02562 * 14 12 11 16 16 F 1.35101 * 120.11263 * 0.02562 * 15 14 12 17 17 C 1.38322 * 119.77935 * 180.02562 * 15 14 12 18 18 C 1.38202 * 120.11924 * 359.97438 * 17 15 14 19 19 C 1.38464 * 120.33583 * 359.97438 * 18 17 15 20 20 C 1.50693 * 119.88864 * 180.02562 * 19 18 17 21 21 O 1.42904 * 109.47135 * 244.99606 * 20 19 18 22 22 Si 1.86301 * 109.47237 * 4.99784 * 20 19 18 23 23 C 1.37857 * 120.21943 * 359.72253 * 19 18 17 24 24 C 1.53781 * 113.61503 * 219.13741 * 6 5 4 25 25 C 1.38244 * 120.05849 * 359.72378 * 5 4 3 26 26 C 1.38288 * 120.10735 * 0.54781 * 25 5 4 27 27 C 1.38126 * 120.05387 * 359.44975 * 26 25 5 28 28 H 1.09002 * 109.46947 * 300.00698 * 1 2 3 29 29 H 1.08998 * 109.47276 * 60.00138 * 1 2 3 30 30 H 1.08997 * 109.47389 * 180.02562 * 1 2 3 31 31 H 1.08007 * 120.02994 * 359.94447 * 4 3 2 32 32 H 1.09003 * 113.61152 * 254.53292 * 8 6 5 33 33 H 1.08996 * 113.60995 * 25.34219 * 8 6 5 34 34 H 0.97000 * 119.99575 * 334.99234 * 11 9 8 35 35 H 1.07999 * 119.94196 * 180.02562 * 17 15 14 36 36 H 1.07995 * 119.83384 * 179.97438 * 18 17 15 37 37 H 1.08999 * 109.47491 * 125.00316 * 20 19 18 38 38 H 0.96705 * 113.99364 * 60.00643 * 21 20 19 39 39 H 1.48497 * 109.99866 * 58.68502 * 22 20 19 40 40 H 1.48505 * 110.00068 * 180.02562 * 22 20 19 41 41 H 1.08001 * 120.06548 * 180.29855 * 23 19 18 42 42 H 1.09000 * 113.61543 * 334.56709 * 24 6 5 43 43 H 1.09003 * 113.61343 * 105.47068 * 24 6 5 44 44 H 1.07993 * 119.94966 * 180.29953 * 25 5 4 45 45 H 1.08002 * 119.97455 * 179.73146 * 26 25 5 46 46 H 1.07999 * 120.02655 * 180.25493 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2847 -0.0005 5 6 4.0560 2.5170 -0.0011 6 6 5.5608 2.5981 -0.0022 7 1 6.0369 1.6321 0.1662 8 6 6.1355 3.3669 -1.2037 9 6 7.1510 3.9802 -0.2253 10 1 7.3463 5.0375 -0.4046 11 7 8.3772 3.1917 -0.0813 12 6 9.5221 3.7902 0.3029 13 8 9.5371 4.9842 0.5303 14 6 10.7581 2.9950 0.4485 15 6 11.9477 3.6122 0.8474 16 9 11.9708 4.9389 1.1016 17 6 13.1008 2.8600 0.9807 18 6 13.0773 1.5027 0.7212 19 6 11.9018 0.8864 0.3270 20 6 11.8875 -0.5943 0.0471 21 8 11.6060 -0.8149 -1.3365 22 14 13.5507 -1.3216 0.4661 23 6 10.7431 1.6216 0.1956 24 6 6.1179 3.7225 0.8866 25 6 3.3020 3.6757 -0.0068 26 6 1.9210 3.6047 -0.0006 27 6 1.2915 2.3753 -0.0002 28 1 -0.3633 0.5140 0.8899 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 4.0206 0.3798 0.0000 32 1 6.5891 2.7233 -1.9574 33 1 5.4429 4.0934 -1.6288 34 1 8.3651 2.2388 -0.2625 35 1 14.0209 3.3339 1.2890 36 1 13.9804 0.9199 0.8264 37 1 11.1187 -1.0716 0.6547 38 1 12.2510 -0.4172 -1.9373 39 1 13.8692 -1.0710 1.8947 40 1 13.5499 -2.7815 0.1939 41 1 9.8265 1.1374 -0.1074 42 1 5.4211 4.5475 1.0350 43 1 6.5574 3.3656 1.8181 44 1 3.7923 4.6380 -0.0121 45 1 1.3340 4.5114 -0.0008 46 1 0.2129 2.3203 0.0005 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_12335834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:38:01 Heat of formation + Delta-G solvation = -61.422764 kcal Electronic energy + Delta-G solvation = -30711.279498 eV Core-core repulsion = 26255.382847 eV Total energy + Delta-G solvation = -4455.896651 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -49.86278 -41.79223 -41.11462 -40.40525 -39.39667 -37.88042 -37.55707 -34.68453 -32.78674 -32.39552 -31.93987 -30.85160 -28.30895 -26.79207 -26.75973 -26.44885 -25.23120 -23.62067 -23.33709 -22.24767 -21.66603 -20.33781 -19.24029 -18.80953 -18.35948 -18.25421 -17.39346 -17.23935 -17.01416 -16.83583 -16.73919 -16.67392 -16.34613 -16.00206 -15.94425 -15.74241 -15.59729 -15.35172 -14.84250 -14.52241 -14.44523 -14.35621 -14.29198 -14.02779 -13.79532 -13.58778 -13.35227 -13.30975 -13.15138 -12.88986 -12.71855 -12.35829 -12.28822 -12.15090 -11.98230 -11.68730 -11.63844 -11.31664 -11.05958 -10.60201 -10.43933 -10.11891 -9.86699 -9.73426 -9.12373 -5.18282 -0.53407 -0.12449 0.33965 0.51230 1.11251 1.49273 1.63870 1.84825 1.93130 2.31281 2.45740 2.75086 3.00007 3.21236 3.34477 3.37392 3.42372 3.51331 3.62990 3.67659 3.83415 3.85182 3.89255 3.97597 4.01466 4.13826 4.17792 4.20164 4.25818 4.34438 4.41877 4.50505 4.54798 4.58818 4.62078 4.64470 4.67627 4.71120 4.81290 4.83745 4.89830 4.94689 5.01686 5.06703 5.08569 5.35370 5.46116 5.50612 5.52574 5.68231 5.80358 6.35687 6.39004 6.44611 7.11658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.129 3.871 4 C -0.149 4.149 5 C -0.032 4.032 6 C -0.075 4.075 7 H 0.098 0.902 8 C -0.134 4.134 9 C 0.120 3.880 10 H 0.109 0.891 11 N -0.708 5.708 12 C 0.562 3.438 13 O -0.518 6.518 14 C -0.175 4.175 15 C 0.168 3.832 16 F -0.110 7.110 17 C -0.156 4.156 18 C -0.058 4.058 19 C -0.141 4.141 20 C -0.067 4.067 21 O -0.538 6.538 22 Si 0.686 3.314 23 C -0.031 4.031 24 C -0.142 4.142 25 C -0.154 4.154 26 C -0.076 4.076 27 C -0.212 4.212 28 H 0.056 0.944 29 H 0.056 0.944 30 H 0.101 0.899 31 H 0.129 0.871 32 H 0.078 0.922 33 H 0.101 0.899 34 H 0.401 0.599 35 H 0.150 0.850 36 H 0.142 0.858 37 H 0.118 0.882 38 H 0.381 0.619 39 H -0.255 1.255 40 H -0.252 1.252 41 H 0.138 0.862 42 H 0.098 0.902 43 H 0.075 0.925 44 H 0.125 0.875 45 H 0.126 0.874 46 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.703 -2.963 -2.009 3.648 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.168 4.168 5 C -0.032 4.032 6 C -0.093 4.093 7 H 0.116 0.884 8 C -0.172 4.172 9 C 0.014 3.986 10 H 0.126 0.874 11 N -0.360 5.360 12 C 0.349 3.651 13 O -0.393 6.393 14 C -0.179 4.179 15 C 0.147 3.853 16 F -0.088 7.088 17 C -0.175 4.175 18 C -0.076 4.076 19 C -0.141 4.141 20 C -0.177 4.177 21 O -0.343 6.343 22 Si 0.587 3.413 23 C -0.050 4.050 24 C -0.181 4.181 25 C -0.172 4.172 26 C -0.094 4.094 27 C -0.231 4.231 28 H 0.074 0.926 29 H 0.075 0.925 30 H 0.119 0.881 31 H 0.147 0.853 32 H 0.097 0.903 33 H 0.120 0.880 34 H 0.237 0.763 35 H 0.168 0.832 36 H 0.159 0.841 37 H 0.135 0.865 38 H 0.229 0.771 39 H -0.180 1.180 40 H -0.176 1.176 41 H 0.156 0.844 42 H 0.116 0.884 43 H 0.094 0.906 44 H 0.143 0.857 45 H 0.144 0.856 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 0.714 -3.128 -1.089 3.388 hybrid contribution -1.023 -0.019 0.217 1.046 sum -0.309 -3.147 -0.872 3.280 Atomic orbital electron populations 1.23085 0.78094 1.04189 1.01443 1.86079 1.21615 1.26899 1.88587 1.19033 0.92321 0.84263 0.95994 1.20303 0.91329 0.98193 1.06938 1.19435 0.94650 0.92175 0.96964 1.21621 0.90951 0.99188 0.97521 0.88374 1.23428 0.97545 0.99964 0.96249 1.21916 0.82950 0.97114 0.96576 0.87350 1.45540 1.08454 1.12233 1.69762 1.17958 0.82890 0.87123 0.77145 1.90873 1.85277 1.14417 1.48781 1.20058 0.93801 0.94859 1.09167 1.17751 0.93189 0.78443 0.95922 1.91634 1.96894 1.29966 1.90333 1.21177 0.98014 0.94308 1.04021 1.21080 0.97379 0.93928 0.95233 1.20331 0.93618 0.97156 1.03013 1.25046 1.12492 0.93470 0.86736 1.86528 1.54850 1.78686 1.14278 0.94801 0.80533 0.81852 0.84088 1.21026 0.98604 0.91086 0.94241 1.23600 0.97941 0.98588 0.97950 1.20917 0.93645 0.98149 1.04512 1.20949 0.94580 0.97068 0.96841 1.21271 1.00164 0.92462 1.09217 0.92557 0.92534 0.88051 0.85321 0.90298 0.88035 0.76332 0.83189 0.84068 0.86504 0.77134 1.17953 1.17618 0.84399 0.88358 0.90605 0.85678 0.85636 0.85492 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.79 10.50 -19.42 -0.20 -1.00 16 3 C 0.13 0.31 6.69 -39.22 -0.26 0.05 16 4 C -0.15 -0.27 9.65 -39.43 -0.38 -0.65 16 5 C -0.03 -0.02 5.29 -104.65 -0.55 -0.57 16 6 C -0.07 0.09 3.85 -90.96 -0.35 -0.26 16 7 H 0.10 -0.19 8.09 -51.93 -0.42 -0.61 16 8 C -0.13 0.23 7.29 -25.92 -0.19 0.04 16 9 C 0.12 -0.03 4.33 -67.03 -0.29 -0.32 16 10 H 0.11 0.14 7.46 -51.93 -0.39 -0.24 16 11 N -0.71 0.17 5.22 -53.92 -0.28 -0.11 16 12 C 0.56 1.61 7.77 -12.40 -0.10 1.51 16 13 O -0.52 -3.60 14.94 5.31 0.08 -3.52 16 14 C -0.17 -0.21 5.88 -104.91 -0.62 -0.82 16 15 C 0.17 0.31 7.29 -38.96 -0.28 0.03 16 16 F -0.11 -0.52 15.55 2.25 0.04 -0.48 16 17 C -0.16 0.17 10.01 -39.56 -0.40 -0.22 16 18 C -0.06 0.15 8.66 -39.51 -0.34 -0.19 16 19 C -0.14 0.30 5.34 -104.68 -0.56 -0.26 16 20 C -0.07 0.17 2.79 36.00 0.10 0.27 16 21 O -0.54 1.14 12.83 -35.23 -0.45 0.69 16 22 Si 0.69 -2.04 29.79 -169.99 -5.06 -7.11 16 23 C -0.03 0.04 9.17 -39.19 -0.36 -0.32 16 24 C -0.14 0.09 7.27 -25.83 -0.19 -0.10 16 25 C -0.15 -0.06 8.52 -39.56 -0.34 -0.40 16 26 C -0.08 -0.05 10.04 -39.60 -0.40 -0.44 16 27 C -0.21 -0.27 9.04 -39.43 -0.36 -0.62 16 28 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 29 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 30 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 31 H 0.13 0.11 8.05 -52.48 -0.42 -0.31 16 32 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.10 -0.19 7.62 -51.93 -0.40 -0.58 16 34 H 0.40 -1.08 6.74 -40.82 -0.27 -1.36 16 35 H 0.15 -0.46 8.06 -52.49 -0.42 -0.88 16 36 H 0.14 -0.71 4.88 -52.49 -0.26 -0.96 16 37 H 0.12 -0.28 7.96 -51.93 -0.41 -0.70 16 38 H 0.38 -2.20 8.70 45.56 0.40 -1.81 16 39 H -0.25 0.15 7.11 56.52 0.40 0.55 16 40 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 41 H 0.14 -0.44 6.41 -52.49 -0.34 -0.78 16 42 H 0.10 -0.09 6.41 -51.93 -0.33 -0.42 16 43 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 44 H 0.13 -0.15 6.72 -52.49 -0.35 -0.50 16 45 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 46 H 0.13 -0.06 6.30 -52.49 -0.33 -0.39 16 LS Contribution 382.93 15.07 5.77 5.77 Total: 0.00 -9.46 382.93 -10.62 -20.08 By element: Atomic # 1 Polarization: -6.36 SS G_CDS: -5.63 Total: -12.00 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: -4.87 Total: -2.32 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.28 Total: -0.11 kcal Atomic # 8 Polarization: -3.25 SS G_CDS: -0.58 Total: -3.83 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.04 Total: -0.48 kcal Atomic # 14 Polarization: -2.04 SS G_CDS: -5.06 Total: -7.11 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -9.46 -10.62 -20.08 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_12335834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.345 kcal (2) G-P(sol) polarization free energy of solvation -9.462 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.807 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.078 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.423 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds