Wall clock time and date at job start Sat Mar 6 2021 14:37:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35900 * 116.99943 * 2 1 4 4 C 1.38707 * 120.05163 * 180.02562 * 3 2 1 5 5 C 1.38166 * 119.94172 * 179.97438 * 4 3 2 6 6 C 1.50701 * 119.97212 * 180.02562 * 5 4 3 7 7 H 1.09002 * 112.85271 * 350.32798 * 6 5 4 8 8 C 1.53784 * 113.61740 * 121.52963 * 6 5 4 9 9 C 1.53780 * 87.07983 * 139.98125 * 8 6 5 10 10 H 1.09001 * 113.61110 * 220.01493 * 9 8 6 11 11 N 1.46500 * 113.61535 * 89.20484 * 9 8 6 12 12 C 1.34778 * 120.00098 * 154.99380 * 11 9 8 13 13 O 1.21564 * 119.99842 * 0.02562 * 12 11 9 14 14 C 1.47693 * 119.99598 * 179.97438 * 12 11 9 15 15 C 1.39826 * 120.16238 * 180.02562 * 14 12 11 16 16 F 1.35101 * 120.11263 * 0.02562 * 15 14 12 17 17 C 1.38322 * 119.77935 * 180.02562 * 15 14 12 18 18 C 1.38202 * 120.11924 * 359.97438 * 17 15 14 19 19 C 1.38464 * 120.33583 * 359.97438 * 18 17 15 20 20 C 1.50693 * 119.88864 * 180.02562 * 19 18 17 21 21 O 1.42904 * 109.47135 * 244.99606 * 20 19 18 22 22 Si 1.86301 * 109.47237 * 4.99784 * 20 19 18 23 23 C 1.37857 * 120.21943 * 359.72253 * 19 18 17 24 24 C 1.53781 * 113.61503 * 219.13741 * 6 5 4 25 25 C 1.38244 * 120.05849 * 359.72378 * 5 4 3 26 26 C 1.38288 * 120.10735 * 0.54781 * 25 5 4 27 27 C 1.38126 * 120.05387 * 359.44975 * 26 25 5 28 28 H 1.09002 * 109.46947 * 300.00698 * 1 2 3 29 29 H 1.08998 * 109.47276 * 60.00138 * 1 2 3 30 30 H 1.08997 * 109.47389 * 180.02562 * 1 2 3 31 31 H 1.08007 * 120.02994 * 359.94447 * 4 3 2 32 32 H 1.09003 * 113.61152 * 254.53292 * 8 6 5 33 33 H 1.08996 * 113.60995 * 25.34219 * 8 6 5 34 34 H 0.97000 * 119.99575 * 334.99234 * 11 9 8 35 35 H 1.07999 * 119.94196 * 180.02562 * 17 15 14 36 36 H 1.07995 * 119.83384 * 179.97438 * 18 17 15 37 37 H 1.08999 * 109.47491 * 125.00316 * 20 19 18 38 38 H 0.96705 * 113.99364 * 60.00643 * 21 20 19 39 39 H 1.48497 * 109.99866 * 58.68502 * 22 20 19 40 40 H 1.48505 * 110.00068 * 180.02562 * 22 20 19 41 41 H 1.08001 * 120.06548 * 180.29855 * 23 19 18 42 42 H 1.09000 * 113.61543 * 334.56709 * 24 6 5 43 43 H 1.09003 * 113.61343 * 105.47068 * 24 6 5 44 44 H 1.07993 * 119.94966 * 180.29953 * 25 5 4 45 45 H 1.08002 * 119.97455 * 179.73146 * 26 25 5 46 46 H 1.07999 * 120.02655 * 180.25493 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2847 -0.0005 5 6 4.0560 2.5170 -0.0011 6 6 5.5608 2.5981 -0.0022 7 1 6.0369 1.6321 0.1662 8 6 6.1355 3.3669 -1.2037 9 6 7.1510 3.9802 -0.2253 10 1 7.3463 5.0375 -0.4046 11 7 8.3772 3.1917 -0.0813 12 6 9.5221 3.7902 0.3029 13 8 9.5371 4.9842 0.5303 14 6 10.7581 2.9950 0.4485 15 6 11.9477 3.6122 0.8474 16 9 11.9708 4.9389 1.1016 17 6 13.1008 2.8600 0.9807 18 6 13.0773 1.5027 0.7212 19 6 11.9018 0.8864 0.3270 20 6 11.8875 -0.5943 0.0471 21 8 11.6060 -0.8149 -1.3365 22 14 13.5507 -1.3216 0.4661 23 6 10.7431 1.6216 0.1956 24 6 6.1179 3.7225 0.8866 25 6 3.3020 3.6757 -0.0068 26 6 1.9210 3.6047 -0.0006 27 6 1.2915 2.3753 -0.0002 28 1 -0.3633 0.5140 0.8899 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 4.0206 0.3798 0.0000 32 1 6.5891 2.7233 -1.9574 33 1 5.4429 4.0934 -1.6288 34 1 8.3651 2.2388 -0.2625 35 1 14.0209 3.3339 1.2890 36 1 13.9804 0.9199 0.8264 37 1 11.1187 -1.0716 0.6547 38 1 12.2510 -0.4172 -1.9373 39 1 13.8692 -1.0710 1.8947 40 1 13.5499 -2.7815 0.1939 41 1 9.8265 1.1374 -0.1074 42 1 5.4211 4.5475 1.0350 43 1 6.5574 3.3656 1.8181 44 1 3.7923 4.6380 -0.0121 45 1 1.3340 4.5114 -0.0008 46 1 0.2129 2.3203 0.0005 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_12335834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:37:59 Heat of formation + Delta-G solvation = -59.804647 kcal Electronic energy + Delta-G solvation = -30711.209331 eV Core-core repulsion = 26255.382847 eV Total energy + Delta-G solvation = -4455.826484 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -50.01936 -41.83040 -41.13721 -40.36411 -39.47729 -37.90530 -37.41674 -34.79888 -32.75234 -32.30548 -31.93688 -30.86524 -28.25559 -26.73893 -26.63633 -26.43998 -25.19945 -23.63351 -23.29506 -22.25839 -21.71041 -20.35036 -19.22276 -18.82507 -18.30155 -18.24670 -17.35196 -17.25077 -17.03953 -16.92410 -16.79694 -16.68599 -16.24336 -16.05836 -15.89034 -15.71978 -15.63099 -15.32277 -14.76438 -14.51272 -14.45169 -14.37743 -14.29643 -14.02813 -13.68896 -13.53138 -13.30500 -13.26284 -13.14045 -12.85231 -12.70210 -12.32262 -12.16851 -12.14111 -11.87841 -11.67708 -11.62024 -11.30209 -11.23140 -10.45845 -10.42060 -10.14101 -9.83638 -9.76784 -9.17398 -4.96259 -0.51074 -0.03806 0.30531 0.45855 1.31923 1.57581 1.68073 1.88860 2.03050 2.33465 2.46086 2.71555 3.04090 3.34932 3.40540 3.46387 3.57884 3.65358 3.68262 3.70040 3.85758 3.92869 4.00203 4.05908 4.10318 4.16745 4.26055 4.33228 4.36631 4.42915 4.52077 4.55742 4.58839 4.63422 4.69363 4.74908 4.76254 4.77899 4.86029 4.93780 4.94405 4.97885 5.07271 5.09777 5.13750 5.32275 5.44101 5.49392 5.59206 5.67351 5.80493 6.32451 6.41890 6.80197 7.01674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.166 4.166 5 C -0.034 4.034 6 C -0.067 4.067 7 H 0.109 0.891 8 C -0.121 4.121 9 C 0.114 3.886 10 H 0.089 0.911 11 N -0.692 5.692 12 C 0.557 3.443 13 O -0.570 6.570 14 C -0.189 4.189 15 C 0.134 3.866 16 F -0.136 7.136 17 C -0.152 4.152 18 C -0.049 4.049 19 C -0.135 4.135 20 C -0.067 4.067 21 O -0.551 6.551 22 Si 0.771 3.229 23 C -0.026 4.026 24 C -0.140 4.140 25 C -0.160 4.160 26 C -0.084 4.084 27 C -0.221 4.221 28 H 0.062 0.938 29 H 0.063 0.937 30 H 0.115 0.885 31 H 0.132 0.868 32 H 0.089 0.911 33 H 0.106 0.894 34 H 0.414 0.586 35 H 0.169 0.831 36 H 0.170 0.830 37 H 0.118 0.882 38 H 0.397 0.603 39 H -0.282 1.282 40 H -0.303 1.303 41 H 0.156 0.844 42 H 0.101 0.899 43 H 0.066 0.934 44 H 0.139 0.861 45 H 0.143 0.857 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.981 -4.079 -2.573 4.921 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.184 4.184 5 C -0.034 4.034 6 C -0.086 4.086 7 H 0.127 0.873 8 C -0.159 4.159 9 C 0.009 3.991 10 H 0.108 0.892 11 N -0.344 5.344 12 C 0.345 3.655 13 O -0.449 6.449 14 C -0.193 4.193 15 C 0.113 3.887 16 F -0.115 7.115 17 C -0.170 4.170 18 C -0.066 4.066 19 C -0.135 4.135 20 C -0.177 4.177 21 O -0.360 6.360 22 Si 0.677 3.323 23 C -0.044 4.044 24 C -0.178 4.178 25 C -0.178 4.178 26 C -0.102 4.102 27 C -0.240 4.240 28 H 0.081 0.919 29 H 0.082 0.918 30 H 0.133 0.867 31 H 0.149 0.851 32 H 0.107 0.893 33 H 0.124 0.876 34 H 0.253 0.747 35 H 0.186 0.814 36 H 0.187 0.813 37 H 0.135 0.865 38 H 0.248 0.752 39 H -0.209 1.209 40 H -0.231 1.231 41 H 0.174 0.826 42 H 0.119 0.881 43 H 0.085 0.915 44 H 0.157 0.843 45 H 0.161 0.839 46 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 0.970 -4.257 -1.684 4.679 hybrid contribution -1.126 0.217 0.389 1.211 sum -0.156 -4.040 -1.295 4.245 Atomic orbital electron populations 1.23293 0.76656 1.05377 1.02112 1.86041 1.23274 1.27272 1.88783 1.19287 0.92825 0.84668 0.96781 1.20503 0.91499 0.98832 1.07591 1.19595 0.95416 0.91894 0.96500 1.21611 0.90043 0.99469 0.97429 0.87331 1.23372 0.96725 0.99829 0.96001 1.21933 0.83112 0.96392 0.97656 0.89250 1.45445 1.07751 1.12851 1.68382 1.18321 0.83987 0.86699 0.76476 1.90838 1.86121 1.16581 1.51405 1.20036 0.92963 0.95737 1.10554 1.18215 0.94708 0.77819 0.97908 1.91561 1.97089 1.31900 1.90920 1.21404 0.97657 0.94720 1.03222 1.21388 0.98243 0.93411 0.93598 1.20476 0.93476 0.97391 1.02173 1.25117 1.12872 0.92834 0.86888 1.86503 1.55918 1.79000 1.14538 0.93848 0.78863 0.78236 0.81366 1.21192 0.99793 0.89917 0.93534 1.23583 0.97786 0.98993 0.97475 1.21167 0.93836 0.98745 1.04078 1.21246 0.94973 0.97578 0.96356 1.21489 1.00943 0.92399 1.09152 0.91916 0.91800 0.86683 0.85051 0.89253 0.87607 0.74728 0.81394 0.81311 0.86485 0.75226 1.20864 1.23087 0.82609 0.88061 0.91489 0.84322 0.83889 0.84235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.34 -1.91 10.50 -92.42 -0.97 -2.88 16 3 C 0.11 0.59 6.69 22.50 0.15 0.74 16 4 C -0.17 -0.67 9.65 22.36 0.22 -0.45 16 5 C -0.03 -0.04 5.29 -19.88 -0.11 -0.14 16 6 C -0.07 0.17 3.85 -11.01 -0.04 0.13 16 7 H 0.11 -0.51 8.09 -2.39 -0.02 -0.53 16 8 C -0.12 0.45 7.29 31.12 0.23 0.68 16 9 C 0.11 0.03 4.33 45.58 0.20 0.22 16 10 H 0.09 0.41 7.46 -2.39 -0.02 0.39 16 11 N -0.69 -0.10 5.22 -442.78 -2.31 -2.40 16 12 C 0.56 4.11 7.77 86.74 0.67 4.79 16 13 O -0.57 -9.56 14.94 -3.92 -0.06 -9.62 16 14 C -0.19 -0.61 5.88 -20.05 -0.12 -0.73 16 15 C 0.13 0.66 7.29 22.67 0.17 0.82 16 16 F -0.14 -1.64 15.55 44.97 0.70 -0.94 16 17 C -0.15 0.41 10.01 22.28 0.22 0.63 16 18 C -0.05 0.34 8.66 22.32 0.19 0.53 16 19 C -0.13 0.77 5.34 -19.90 -0.11 0.67 16 20 C -0.07 0.46 2.79 71.23 0.20 0.66 16 21 O -0.55 3.35 12.83 -148.98 -1.91 1.44 16 22 Si 0.77 -5.61 29.79 68.60 2.04 -3.56 16 23 C -0.03 0.09 9.17 22.52 0.21 0.29 16 24 C -0.14 0.10 7.27 31.18 0.23 0.32 16 25 C -0.16 -0.09 8.52 22.28 0.19 0.10 16 26 C -0.08 -0.08 10.04 22.26 0.22 0.14 16 27 C -0.22 -0.58 9.04 22.36 0.20 -0.38 16 28 H 0.06 -0.22 7.66 -2.39 -0.02 -0.23 16 29 H 0.06 -0.23 7.66 -2.39 -0.02 -0.25 16 30 H 0.11 -0.60 8.14 -2.39 -0.02 -0.62 16 31 H 0.13 0.31 8.05 -2.91 -0.02 0.29 16 32 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 33 H 0.11 -0.44 7.62 -2.39 -0.02 -0.46 16 34 H 0.41 -2.41 6.74 -92.71 -0.62 -3.04 16 35 H 0.17 -1.16 8.06 -2.91 -0.02 -1.19 16 36 H 0.17 -2.15 4.88 -2.91 -0.01 -2.16 16 37 H 0.12 -0.76 7.96 -2.39 -0.02 -0.78 16 38 H 0.40 -5.44 8.70 -74.05 -0.64 -6.09 16 39 H -0.28 0.72 7.11 99.48 0.71 1.42 16 40 H -0.30 -0.47 7.11 99.48 0.71 0.24 16 41 H 0.16 -1.21 6.41 -2.91 -0.02 -1.23 16 42 H 0.10 -0.14 6.41 -2.39 -0.02 -0.15 16 43 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 44 H 0.14 -0.38 6.72 -2.91 -0.02 -0.40 16 45 H 0.14 -0.47 8.06 -2.91 -0.02 -0.50 16 46 H 0.14 -0.15 6.30 -2.91 -0.02 -0.16 16 Total: 0.00 -25.10 382.93 1.35 -23.75 By element: Atomic # 1 Polarization: -15.71 SS G_CDS: -0.18 Total: -15.89 kcal Atomic # 6 Polarization: 6.07 SS G_CDS: 4.03 Total: 10.11 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -2.31 Total: -2.40 kcal Atomic # 8 Polarization: -8.12 SS G_CDS: -2.94 Total: -11.06 kcal Atomic # 9 Polarization: -1.64 SS G_CDS: 0.70 Total: -0.94 kcal Atomic # 14 Polarization: -5.61 SS G_CDS: 2.04 Total: -3.56 kcal Total: -25.10 1.35 -23.75 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_12335834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.055 kcal (2) G-P(sol) polarization free energy of solvation -25.097 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.151 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.347 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.750 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.805 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds