Wall clock time and date at job start Sat Mar 6 2021 14:38:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35904 * 117.00131 * 2 1 4 4 C 1.38705 * 120.05898 * 180.29486 * 3 2 1 5 5 C 1.38173 * 119.94106 * 180.29847 * 4 3 2 6 6 C 1.50701 * 119.96798 * 179.70184 * 5 4 3 7 7 H 1.09002 * 112.85448 * 348.77906 * 6 5 4 8 8 C 1.53776 * 113.61367 * 119.98372 * 6 5 4 9 9 C 1.53781 * 87.08289 * 139.97795 * 8 6 5 10 10 H 1.09002 * 113.61400 * 220.01719 * 9 8 6 11 11 N 1.46501 * 113.61477 * 89.19993 * 9 8 6 12 12 C 1.34779 * 120.00196 * 154.99645 * 11 9 8 13 13 O 1.21287 * 119.99491 * 0.02562 * 12 11 9 14 14 C 1.50696 * 120.00355 * 179.97438 * 12 11 9 15 15 C 1.50695 * 109.47450 * 180.02562 * 14 12 11 16 16 C 1.38238 * 119.99885 * 269.73399 * 15 14 12 17 17 C 1.38239 * 119.99912 * 179.81246 * 16 15 14 18 18 C 1.38233 * 119.99567 * 0.41013 * 17 16 15 19 19 C 1.50702 * 119.99584 * 179.79414 * 18 17 16 20 20 O 1.42899 * 109.47197 * 120.02646 * 19 18 17 21 21 Si 1.86301 * 109.47249 * 0.02562 * 19 18 17 22 22 C 1.38227 * 120.00410 * 359.81958 * 18 17 16 23 23 C 1.38234 * 120.00067 * 90.00050 * 15 14 12 24 24 C 1.53771 * 87.08081 * 334.56416 * 9 8 6 25 25 C 1.38232 * 120.05858 * 359.68223 * 5 4 3 26 26 C 1.38294 * 120.11124 * 0.02562 * 25 5 4 27 27 C 1.38122 * 120.05499 * 359.97438 * 26 25 5 28 28 H 1.08999 * 109.46959 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.46950 * 300.00206 * 1 2 3 30 30 H 1.08994 * 109.46928 * 60.00366 * 1 2 3 31 31 H 1.07997 * 120.03207 * 0.02562 * 4 3 2 32 32 H 1.09010 * 113.61357 * 254.52629 * 8 6 5 33 33 H 1.09000 * 113.61779 * 25.34078 * 8 6 5 34 34 H 0.97003 * 119.99988 * 334.99724 * 11 9 8 35 35 H 1.08997 * 109.47156 * 300.01184 * 14 12 11 36 36 H 1.09010 * 109.46714 * 60.00308 * 14 12 11 37 37 H 1.08004 * 120.00212 * 359.97438 * 16 15 14 38 38 H 1.07999 * 119.99919 * 180.20800 * 17 16 15 39 39 H 1.08996 * 109.47128 * 240.02426 * 19 18 17 40 40 H 0.96701 * 113.99650 * 299.99806 * 20 19 18 41 41 H 1.48507 * 109.99954 * 58.68004 * 21 19 18 42 42 H 1.48495 * 110.00185 * 179.97438 * 21 19 18 43 43 H 1.08009 * 120.00092 * 179.97438 * 22 18 17 44 44 H 1.08000 * 120.00007 * 359.97438 * 23 15 14 45 45 H 1.09003 * 113.61799 * 270.88572 * 24 9 8 46 46 H 1.09011 * 113.61394 * 139.97820 * 24 9 8 47 47 H 1.08002 * 119.94710 * 180.02562 * 25 5 4 48 48 H 1.07999 * 119.97251 * 180.02562 * 26 25 5 49 49 H 1.08002 * 120.02504 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2849 -0.0062 5 6 4.0559 2.5173 0.0001 6 6 5.5607 2.5983 0.0002 7 1 6.0365 1.6363 0.1905 8 6 6.1377 3.3409 -1.2166 9 6 7.1512 3.9755 -0.2497 10 1 7.3469 5.0287 -0.4516 11 7 8.3772 3.1904 -0.0862 12 6 9.5213 3.7972 0.2871 13 8 9.5358 4.9932 0.4881 14 6 10.7823 2.9895 0.4559 15 6 11.9088 3.8984 0.8753 16 6 12.7041 4.5003 -0.0818 17 6 13.7350 5.3372 0.3028 18 6 13.9758 5.5653 1.6447 19 6 15.1026 6.4740 2.0641 20 8 14.5769 7.5673 2.8194 21 14 15.9712 7.1256 0.5503 22 6 13.1835 4.9597 2.6019 23 6 12.1502 4.1259 2.2173 24 6 6.1159 3.7437 0.8633 25 6 3.3019 3.6758 0.0058 26 6 1.9208 3.6048 0.0059 27 6 1.2914 2.3753 -0.0003 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5139 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 4.0207 0.3801 -0.0114 32 1 6.5929 2.6811 -1.9553 33 1 5.4460 4.0579 -1.6588 34 1 8.3656 2.2338 -0.2466 35 1 10.6265 2.2280 1.2201 36 1 11.0353 2.5091 -0.4893 37 1 12.5184 4.3189 -1.1302 38 1 14.3542 5.8101 -0.4450 39 1 15.8103 5.9160 2.6772 40 1 13.9387 8.1089 2.3351 41 1 15.0097 7.8614 -0.3097 42 1 17.0841 8.0236 0.9504 43 1 13.3720 5.1377 3.6504 44 1 11.5313 3.6525 2.9651 45 1 5.4187 4.5719 0.9907 46 1 6.5535 3.4089 1.8039 47 1 3.7921 4.6381 0.0103 48 1 1.3339 4.5113 0.0100 49 1 0.2127 2.3204 -0.0007 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_12335836.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:38:04 Heat of formation + Delta-G solvation = -26.109852 kcal Electronic energy + Delta-G solvation = -29456.663680 eV Core-core repulsion = 25316.214669 eV Total energy + Delta-G solvation = -4140.449012 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -41.73175 -41.04323 -40.45641 -39.49187 -37.93639 -37.58990 -34.50628 -33.94486 -32.13772 -31.89129 -31.01711 -29.67534 -28.31919 -26.79502 -26.37044 -25.40792 -23.76948 -23.59681 -22.67269 -22.12948 -21.36511 -20.29372 -18.83146 -18.47026 -18.06817 -17.34827 -17.23248 -16.95513 -16.87995 -16.68904 -16.55952 -16.16763 -16.12116 -15.89624 -15.57681 -15.36015 -14.86385 -14.67765 -14.49651 -14.42844 -14.36934 -14.04737 -13.86193 -13.62680 -13.38946 -13.36276 -13.21839 -13.02596 -12.82005 -12.71154 -12.36310 -12.20054 -12.14595 -11.95492 -11.69943 -11.63923 -11.54227 -11.32234 -10.89890 -10.53089 -10.08863 -9.81325 -9.74897 -9.57722 -9.13933 -4.91670 0.28415 0.32498 0.49688 0.51683 1.34356 1.63358 1.66122 2.01757 2.06893 2.29858 2.73619 2.81376 3.38065 3.42967 3.57521 3.61351 3.66514 3.79002 3.81469 3.85771 3.90073 3.94648 4.00246 4.06557 4.12468 4.16391 4.18981 4.25584 4.32854 4.38708 4.49038 4.50865 4.54093 4.58311 4.60658 4.62425 4.66843 4.73082 4.77990 4.89496 4.93615 5.02406 5.07224 5.08554 5.11803 5.33901 5.42398 5.47434 5.52462 5.59227 5.62647 5.67428 5.78839 6.04708 6.43073 6.44574 6.46779 7.22461 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.149 4.149 5 C -0.033 4.033 6 C -0.074 4.074 7 H 0.099 0.901 8 C -0.134 4.134 9 C 0.119 3.881 10 H 0.105 0.895 11 N -0.716 5.716 12 C 0.517 3.483 13 O -0.526 6.526 14 C -0.104 4.104 15 C -0.063 4.063 16 C -0.100 4.100 17 C -0.114 4.114 18 C -0.117 4.117 19 C -0.074 4.074 20 O -0.530 6.530 21 Si 0.683 3.317 22 C -0.091 4.091 23 C -0.104 4.104 24 C -0.143 4.143 25 C -0.155 4.155 26 C -0.076 4.076 27 C -0.213 4.213 28 H 0.101 0.899 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.129 0.871 32 H 0.077 0.923 33 H 0.099 0.901 34 H 0.402 0.598 35 H 0.105 0.895 36 H 0.106 0.894 37 H 0.124 0.876 38 H 0.127 0.873 39 H 0.118 0.882 40 H 0.377 0.623 41 H -0.261 1.261 42 H -0.258 1.258 43 H 0.126 0.874 44 H 0.122 0.878 45 H 0.096 0.904 46 H 0.074 0.926 47 H 0.125 0.875 48 H 0.125 0.875 49 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.992 -5.069 -2.776 6.113 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.168 4.168 5 C -0.033 4.033 6 C -0.092 4.092 7 H 0.117 0.883 8 C -0.172 4.172 9 C 0.014 3.986 10 H 0.123 0.877 11 N -0.368 5.368 12 C 0.303 3.697 13 O -0.401 6.401 14 C -0.143 4.143 15 C -0.064 4.064 16 C -0.118 4.118 17 C -0.132 4.132 18 C -0.118 4.118 19 C -0.184 4.184 20 O -0.337 6.337 21 Si 0.585 3.415 22 C -0.109 4.109 23 C -0.122 4.122 24 C -0.181 4.181 25 C -0.173 4.173 26 C -0.094 4.094 27 C -0.231 4.231 28 H 0.120 0.880 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.147 0.853 32 H 0.096 0.904 33 H 0.117 0.883 34 H 0.236 0.764 35 H 0.124 0.876 36 H 0.124 0.876 37 H 0.142 0.858 38 H 0.144 0.856 39 H 0.136 0.864 40 H 0.224 0.776 41 H -0.186 1.186 42 H -0.183 1.183 43 H 0.144 0.856 44 H 0.140 0.860 45 H 0.114 0.886 46 H 0.093 0.907 47 H 0.143 0.857 48 H 0.143 0.857 49 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -1.271 -3.918 -2.638 4.891 hybrid contribution -1.502 0.226 0.364 1.562 sum -2.774 -3.691 -2.274 5.147 Atomic orbital electron populations 1.23086 0.78077 1.04203 1.01449 1.86078 1.21631 1.26904 1.88588 1.19038 0.92330 0.84252 0.95981 1.20298 0.91314 0.98184 1.06964 1.19447 0.94723 0.92158 0.96940 1.21611 0.90864 0.99173 0.97535 0.88296 1.23419 0.97646 0.99962 0.96208 1.21833 0.83356 0.97083 0.96339 0.87722 1.45704 1.08675 1.11732 1.70692 1.20599 0.84427 0.88452 0.76205 1.90761 1.85407 1.15086 1.48815 1.20696 0.91078 0.97887 1.04673 1.19263 0.95506 0.97962 0.93632 1.20908 0.95010 0.96693 0.99176 1.20936 0.98106 0.99145 0.95001 1.20268 0.98434 0.99436 0.93631 1.25026 0.97701 0.89297 1.06409 1.86585 1.62903 1.42155 1.42022 0.95105 0.81210 0.87287 0.77941 1.20955 0.94686 0.95678 0.99564 1.21014 0.97466 0.98470 0.95213 1.23566 0.98031 0.98427 0.98117 1.20923 0.93645 0.98164 1.04536 1.20951 0.94585 0.97072 0.96837 1.21275 1.00170 0.92464 1.09216 0.88034 0.92539 0.92543 0.85305 0.90402 0.88275 0.76378 0.87635 0.87569 0.85780 0.85599 0.86440 0.77553 1.18555 1.18294 0.85634 0.86011 0.88555 0.90684 0.85713 0.85656 0.85492 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.71 10.50 -19.44 -0.20 -0.91 16 3 C 0.13 0.28 6.69 -39.22 -0.26 0.01 16 4 C -0.15 -0.21 9.65 -39.43 -0.38 -0.59 16 5 C -0.03 -0.01 5.29 -104.65 -0.55 -0.56 16 6 C -0.07 0.12 3.86 -90.96 -0.35 -0.23 16 7 H 0.10 -0.26 8.09 -51.93 -0.42 -0.68 16 8 C -0.13 0.29 7.29 -25.92 -0.19 0.10 16 9 C 0.12 -0.11 4.32 -67.12 -0.29 -0.40 16 10 H 0.10 0.11 7.46 -51.93 -0.39 -0.28 16 11 N -0.72 1.26 5.27 -53.02 -0.28 0.98 16 12 C 0.52 0.36 7.82 -10.99 -0.09 0.28 16 13 O -0.53 -2.85 15.63 5.55 0.09 -2.76 16 14 C -0.10 0.20 5.83 -29.04 -0.17 0.03 16 15 C -0.06 -0.05 4.37 -104.63 -0.46 -0.51 16 16 C -0.10 -0.08 9.70 -39.58 -0.38 -0.46 16 17 C -0.11 -0.10 8.67 -39.58 -0.34 -0.44 16 18 C -0.12 -0.17 5.39 -104.63 -0.56 -0.73 16 19 C -0.07 -0.06 2.82 36.01 0.10 0.04 16 20 O -0.53 -1.35 12.77 -35.23 -0.45 -1.80 16 21 Si 0.68 0.00 29.79 -169.99 -5.06 -5.06 16 22 C -0.09 -0.16 9.61 -39.59 -0.38 -0.54 16 23 C -0.10 -0.14 9.70 -39.58 -0.38 -0.52 16 24 C -0.14 0.16 7.25 -25.92 -0.19 -0.03 16 25 C -0.15 -0.03 8.61 -39.56 -0.34 -0.37 16 26 C -0.08 -0.03 10.04 -39.60 -0.40 -0.43 16 27 C -0.21 -0.22 9.04 -39.43 -0.36 -0.58 16 28 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 29 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 30 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 31 H 0.13 0.05 8.05 -52.49 -0.42 -0.37 16 32 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 33 H 0.10 -0.20 7.72 -51.93 -0.40 -0.60 16 34 H 0.40 -1.81 8.70 -40.82 -0.36 -2.16 16 35 H 0.11 -0.41 8.08 -51.93 -0.42 -0.83 16 36 H 0.11 -0.44 8.09 -51.92 -0.42 -0.86 16 37 H 0.12 -0.13 8.06 -52.48 -0.42 -0.55 16 38 H 0.13 -0.11 4.88 -52.49 -0.26 -0.37 16 39 H 0.12 -0.01 7.96 -51.93 -0.41 -0.42 16 40 H 0.38 0.05 8.70 45.56 0.40 0.45 16 41 H -0.26 -0.60 7.11 56.52 0.40 -0.19 16 42 H -0.26 -0.82 7.11 56.52 0.40 -0.42 16 43 H 0.13 0.16 8.06 -52.48 -0.42 -0.26 16 44 H 0.12 -0.01 8.06 -52.49 -0.42 -0.44 16 45 H 0.10 -0.11 6.31 -51.93 -0.33 -0.44 16 46 H 0.07 -0.02 8.14 -51.92 -0.42 -0.45 16 47 H 0.12 -0.16 6.65 -52.49 -0.35 -0.51 16 48 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 49 H 0.13 -0.08 6.30 -52.49 -0.33 -0.41 16 LS Contribution 402.93 15.07 6.07 6.07 Total: 0.00 -9.34 402.93 -11.88 -21.22 By element: Atomic # 1 Polarization: -5.69 SS G_CDS: -7.06 Total: -12.75 kcal Atomic # 6 Polarization: -0.01 SS G_CDS: -4.98 Total: -4.99 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -0.28 Total: 0.98 kcal Atomic # 8 Polarization: -4.91 SS G_CDS: -0.57 Total: -5.47 kcal Atomic # 14 Polarization: 0.00 SS G_CDS: -5.06 Total: -5.06 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -9.34 -11.88 -21.22 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_12335836.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.885 kcal (2) G-P(sol) polarization free energy of solvation -9.343 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.882 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.225 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.110 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds