Wall clock time and date at job start Sat Mar 6 2021 14:38:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35896 * 116.99905 * 2 1 4 4 C 1.38712 * 120.05475 * 180.27296 * 3 2 1 5 5 C 1.38166 * 119.94507 * 180.31526 * 4 3 2 6 6 C 1.50707 * 119.97234 * 179.70552 * 5 4 3 7 7 H 1.08997 * 112.84940 * 348.53371 * 6 5 4 8 8 C 1.53778 * 113.61281 * 119.72937 * 6 5 4 9 9 C 1.53776 * 87.08195 * 139.97847 * 8 6 5 10 10 H 1.08998 * 113.61990 * 219.93669 * 9 8 6 11 11 N 1.46504 * 113.61263 * 89.11617 * 9 8 6 12 12 C 1.34776 * 120.00308 * 155.00202 * 11 9 8 13 13 O 1.21598 * 119.99737 * 359.97438 * 12 11 9 14 14 C 1.47579 * 120.00199 * 180.02562 * 12 11 9 15 15 C 1.40201 * 119.83228 * 0.02562 * 14 12 11 16 16 C 1.36227 * 120.38093 * 180.02562 * 15 14 12 17 17 C 1.39891 * 119.95514 * 359.69630 * 16 15 14 18 18 C 1.46256 * 133.83194 * 179.55874 * 17 16 15 19 19 C 1.50699 * 126.48700 * 0.76117 * 18 17 16 20 20 O 1.42901 * 109.46830 * 284.71356 * 19 18 17 21 21 Si 1.86298 * 109.46950 * 164.71793 * 19 18 17 22 22 C 1.34463 * 107.03078 * 180.50277 * 18 17 16 23 23 N 1.36562 * 109.98302 * 0.25959 * 22 18 17 24 24 C 1.37833 * 109.86459 * 0.02562 * 23 22 18 25 25 C 1.38645 * 133.38335 * 179.97438 * 24 23 22 26 26 C 1.53782 * 87.08403 * 334.56832 * 9 8 6 27 27 C 1.38238 * 120.05236 * 359.43912 * 5 4 3 28 28 C 1.38284 * 120.11546 * 0.24328 * 27 5 4 29 29 C 1.38120 * 120.05316 * 0.05181 * 28 27 5 30 30 H 1.09007 * 109.46873 * 299.99724 * 1 2 3 31 31 H 1.09000 * 109.46914 * 59.99646 * 1 2 3 32 32 H 1.09003 * 109.47459 * 179.97438 * 1 2 3 33 33 H 1.08004 * 120.02960 * 0.02562 * 4 3 2 34 34 H 1.09007 * 113.61079 * 25.43496 * 8 6 5 35 35 H 1.08993 * 113.69274 * 254.54158 * 8 6 5 36 36 H 0.97002 * 120.00112 * 334.99954 * 11 9 8 37 37 H 1.08004 * 119.80623 * 359.97438 * 15 14 12 38 38 H 1.07991 * 120.02636 * 180.02562 * 16 15 14 39 39 H 1.08991 * 109.47351 * 44.71503 * 19 18 17 40 40 H 0.96708 * 114.00246 * 299.99864 * 20 19 18 41 41 H 1.48506 * 109.99834 * 180.02562 * 21 19 18 42 42 H 1.48502 * 110.00011 * 301.31529 * 21 19 18 43 43 H 1.07995 * 125.00815 * 180.22801 * 22 18 17 44 44 H 0.97003 * 125.06864 * 180.02562 * 23 22 18 45 45 H 1.07995 * 120.16356 * 359.97438 * 25 24 23 46 46 H 1.09002 * 113.61654 * 139.97243 * 26 9 8 47 47 H 1.09001 * 113.61163 * 270.88556 * 26 9 8 48 48 H 1.08007 * 119.94333 * 180.27093 * 27 5 4 49 49 H 1.08003 * 119.97236 * 180.02562 * 28 27 5 50 50 H 1.08001 * 120.02750 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4311 1.2848 -0.0057 5 6 4.0560 2.5170 0.0009 6 6 5.5609 2.5981 0.0014 7 1 6.0364 1.6368 0.1960 8 6 6.1385 3.3354 -1.2182 9 6 7.1515 3.9741 -0.2536 10 1 7.3484 5.0260 -0.4607 11 7 8.3766 3.1886 -0.0847 12 6 9.5209 3.7962 0.2868 13 8 9.5365 4.9964 0.4813 14 6 10.7550 3.0050 0.4565 15 6 10.7333 1.6216 0.2298 16 6 11.8659 0.8804 0.3836 17 6 13.0606 1.5010 0.7637 18 6 14.4169 1.0168 1.0191 19 6 14.8959 -0.4076 0.9067 20 8 14.4256 -1.1581 2.0282 21 14 16.7584 -0.4358 0.8776 22 6 15.1569 2.0841 1.3674 23 7 14.3841 3.2099 1.3615 24 6 13.0929 2.8898 1.0005 25 6 11.9354 3.6364 0.8422 26 6 6.1156 3.7470 0.8600 27 6 3.3020 3.6757 0.0015 28 6 1.9209 3.6047 0.0005 29 6 1.2915 2.3753 0.0001 30 1 -0.3633 0.5138 0.8901 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3634 -1.0277 -0.0005 33 1 4.0206 0.3799 -0.0106 34 1 5.4475 4.0518 -1.6629 35 1 6.5941 2.6737 -1.9548 36 1 8.3642 2.2312 -0.2401 37 1 9.8132 1.1407 -0.0677 38 1 11.8428 -0.1848 0.2071 39 1 14.5114 -0.8488 -0.0127 40 1 14.7295 -0.8213 2.8823 41 1 17.2435 -1.8351 0.7664 42 1 17.2608 0.3676 -0.2658 43 1 16.2075 2.0550 1.6159 44 1 14.6971 4.1020 1.5788 45 1 11.9491 4.7021 1.0164 46 1 6.5528 3.4162 1.8021 47 1 5.4185 4.5758 0.9834 48 1 3.7923 4.6380 0.0022 49 1 1.3341 4.5114 0.0006 50 1 0.2129 2.3204 -0.0002 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_12335838.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:38:08 Heat of formation + Delta-G solvation = 14.119353 kcal Electronic energy + Delta-G solvation = -32633.695118 eV Core-core repulsion = 28173.112384 eV Total energy + Delta-G solvation = -4460.582734 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -42.47907 -41.63883 -40.82359 -39.69080 -38.00581 -37.73156 -37.38990 -34.46147 -33.24259 -32.13987 -31.10169 -30.70615 -30.30257 -28.28582 -26.74051 -26.59728 -26.17935 -24.56892 -23.61849 -23.52423 -22.30483 -21.52536 -20.82111 -20.25442 -19.43632 -18.73721 -18.28134 -17.61374 -17.22931 -17.08717 -16.96490 -16.83354 -16.65359 -16.22271 -16.05648 -15.88339 -15.69235 -15.53399 -15.16275 -15.11021 -14.77031 -14.70871 -14.47958 -14.36048 -14.22478 -14.01334 -13.98624 -13.54196 -13.29419 -13.21945 -13.11120 -12.69378 -12.59963 -12.32016 -12.30560 -12.22781 -12.10979 -11.91263 -11.65454 -11.59161 -11.26656 -10.89588 -10.74213 -10.35044 -10.04988 -9.70632 -9.34445 -9.09870 -8.80424 -5.10145 -0.25050 0.36732 0.40870 0.53811 1.28838 1.37698 1.62163 1.87821 1.97302 2.02431 2.22267 2.33673 2.77836 2.94636 3.42691 3.55256 3.58616 3.67618 3.69939 3.76286 3.77546 3.86543 3.87313 3.93286 4.04559 4.11670 4.16345 4.20268 4.22071 4.32537 4.37304 4.43205 4.49527 4.52947 4.56296 4.58277 4.62877 4.67568 4.71963 4.74470 4.84262 4.94236 4.99440 5.00437 5.11140 5.12540 5.25236 5.37973 5.44743 5.46705 5.52272 5.59004 5.61863 5.72098 5.83063 5.99582 6.36916 6.47045 6.51531 6.65505 7.26190 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.149 4.149 5 C -0.032 4.032 6 C -0.074 4.074 7 H 0.099 0.901 8 C -0.135 4.135 9 C 0.120 3.880 10 H 0.107 0.893 11 N -0.709 5.709 12 C 0.567 3.433 13 O -0.536 6.536 14 C -0.122 4.122 15 C -0.113 4.113 16 C -0.073 4.073 17 C -0.063 4.063 18 C -0.211 4.211 19 C -0.030 4.030 20 O -0.542 6.542 21 Si 0.684 3.316 22 C 0.077 3.923 23 N -0.584 5.584 24 C 0.081 3.919 25 C -0.056 4.056 26 C -0.143 4.143 27 C -0.154 4.154 28 C -0.077 4.077 29 C -0.213 4.213 30 H 0.056 0.944 31 H 0.056 0.944 32 H 0.101 0.899 33 H 0.129 0.871 34 H 0.100 0.900 35 H 0.078 0.922 36 H 0.402 0.598 37 H 0.125 0.875 38 H 0.130 0.870 39 H 0.111 0.889 40 H 0.377 0.623 41 H -0.254 1.254 42 H -0.256 1.256 43 H 0.179 0.821 44 H 0.422 0.578 45 H 0.136 0.864 46 H 0.076 0.924 47 H 0.097 0.903 48 H 0.125 0.875 49 H 0.125 0.875 50 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.148 -0.162 1.344 1.775 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.168 4.168 5 C -0.032 4.032 6 C -0.093 4.093 7 H 0.117 0.883 8 C -0.173 4.173 9 C 0.014 3.986 10 H 0.125 0.875 11 N -0.361 5.361 12 C 0.355 3.645 13 O -0.414 6.414 14 C -0.126 4.126 15 C -0.133 4.133 16 C -0.091 4.091 17 C -0.068 4.068 18 C -0.219 4.219 19 C -0.141 4.141 20 O -0.347 6.347 21 Si 0.586 3.414 22 C -0.052 4.052 23 N -0.186 5.186 24 C -0.025 4.025 25 C -0.077 4.077 26 C -0.181 4.181 27 C -0.173 4.173 28 C -0.095 4.095 29 C -0.232 4.232 30 H 0.075 0.925 31 H 0.074 0.926 32 H 0.119 0.881 33 H 0.147 0.853 34 H 0.118 0.882 35 H 0.096 0.904 36 H 0.238 0.762 37 H 0.143 0.857 38 H 0.148 0.852 39 H 0.129 0.871 40 H 0.224 0.776 41 H -0.179 1.179 42 H -0.181 1.181 43 H 0.196 0.804 44 H 0.260 0.740 45 H 0.154 0.846 46 H 0.094 0.906 47 H 0.115 0.885 48 H 0.143 0.857 49 H 0.143 0.857 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 1.731 0.058 0.578 1.826 hybrid contribution -0.825 0.059 -0.287 0.876 sum 0.906 0.117 0.291 0.959 Atomic orbital electron populations 1.23085 0.78110 1.04183 1.01430 1.86078 1.21604 1.26918 1.88595 1.19034 0.92327 0.84244 0.96007 1.20306 0.91313 0.98218 1.06913 1.19446 0.94707 0.92155 0.96866 1.21621 0.90867 0.99241 0.97546 0.88286 1.23426 0.97609 1.00007 0.96218 1.21859 0.83177 0.97090 0.96438 0.87497 1.45564 1.08564 1.11724 1.70201 1.18148 0.83065 0.87107 0.76180 1.90795 1.85622 1.14586 1.50393 1.19407 0.93125 0.93726 1.06341 1.20682 0.98590 0.92404 1.01630 1.20204 0.90469 0.99991 0.98450 1.19182 0.93771 0.91728 1.02157 1.20735 0.92895 0.95600 1.12668 1.24330 1.10059 0.87775 0.91955 1.86508 1.76953 1.54944 1.16286 0.95284 0.75202 0.82621 0.88300 1.21749 0.96777 0.85033 1.01600 1.41721 1.07141 1.10094 1.59654 1.18074 0.85939 0.94387 1.04106 1.20072 0.88900 0.99861 0.98852 1.23574 0.97961 0.98397 0.98201 1.20924 0.93630 0.98174 1.04525 1.20942 0.94585 0.97049 0.96888 1.21266 1.00144 0.92472 1.09275 0.92549 0.92560 0.88051 0.85294 0.88167 0.90360 0.76227 0.85671 0.85213 0.87144 0.77578 1.17888 1.18092 0.80436 0.73995 0.84592 0.90553 0.88452 0.85675 0.85672 0.85521 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.83 10.50 -19.41 -0.20 -1.03 16 3 C 0.13 0.33 6.69 -39.22 -0.26 0.06 16 4 C -0.15 -0.28 9.65 -39.43 -0.38 -0.66 16 5 C -0.03 -0.02 5.29 -104.64 -0.55 -0.58 16 6 C -0.07 0.07 3.86 -90.96 -0.35 -0.28 16 7 H 0.10 -0.17 8.09 -51.93 -0.42 -0.59 16 8 C -0.13 0.20 7.29 -25.92 -0.19 0.01 16 9 C 0.12 -0.01 4.32 -67.12 -0.29 -0.30 16 10 H 0.11 0.16 7.46 -51.93 -0.39 -0.23 16 11 N -0.71 -0.09 5.21 -54.04 -0.28 -0.37 16 12 C 0.57 1.70 7.76 -12.45 -0.10 1.61 16 13 O -0.54 -3.48 15.91 5.28 0.08 -3.40 16 14 C -0.12 -0.25 5.87 -104.95 -0.62 -0.87 16 15 C -0.11 -0.05 9.46 -39.57 -0.37 -0.42 16 16 C -0.07 -0.09 10.03 -39.69 -0.40 -0.48 16 17 C -0.06 -0.11 6.35 -105.04 -0.67 -0.78 16 18 C -0.21 0.00 5.57 -102.74 -0.57 -0.57 16 19 C -0.03 0.02 3.06 36.01 0.11 0.13 16 20 O -0.54 -0.07 12.88 -35.23 -0.45 -0.52 16 21 Si 0.68 -1.35 30.75 -169.99 -5.23 -6.58 16 22 C 0.08 -0.16 10.43 -16.78 -0.17 -0.34 16 23 N -0.58 0.84 6.07 -10.68 -0.06 0.77 16 24 C 0.08 0.11 7.26 -84.00 -0.61 -0.50 16 25 C -0.06 -0.12 9.61 -39.03 -0.37 -0.49 16 26 C -0.14 0.07 7.25 -25.92 -0.19 -0.12 16 27 C -0.15 -0.08 8.61 -39.56 -0.34 -0.42 16 28 C -0.08 -0.05 10.04 -39.61 -0.40 -0.45 16 29 C -0.21 -0.29 9.04 -39.44 -0.36 -0.64 16 30 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 31 H 0.06 -0.10 7.66 -51.93 -0.40 -0.49 16 32 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 33 H 0.13 0.13 8.05 -52.48 -0.42 -0.30 16 34 H 0.10 -0.16 7.72 -51.93 -0.40 -0.56 16 35 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 36 H 0.40 -0.88 6.69 -40.82 -0.27 -1.15 16 37 H 0.13 -0.29 6.36 -52.48 -0.33 -0.62 16 38 H 0.13 0.02 8.06 -52.49 -0.42 -0.41 16 39 H 0.11 0.03 7.96 -51.93 -0.41 -0.39 16 40 H 0.38 -1.42 8.70 45.56 0.40 -1.02 16 41 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 42 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 43 H 0.18 -1.03 6.35 -52.49 -0.33 -1.37 16 44 H 0.42 -1.76 8.96 -40.82 -0.37 -2.13 16 45 H 0.14 0.26 7.62 -52.49 -0.40 -0.14 16 46 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 47 H 0.10 -0.08 6.31 -51.93 -0.33 -0.41 16 48 H 0.13 -0.13 6.65 -52.48 -0.35 -0.48 16 49 H 0.13 -0.15 8.06 -52.48 -0.42 -0.57 16 50 H 0.13 -0.05 6.30 -52.49 -0.33 -0.38 16 LS Contribution 411.87 15.07 6.21 6.21 Total: 0.00 -10.67 411.87 -12.50 -23.17 By element: Atomic # 1 Polarization: -6.65 SS G_CDS: -6.47 Total: -13.12 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: -6.09 Total: -5.14 kcal Atomic # 7 Polarization: 0.75 SS G_CDS: -0.35 Total: 0.40 kcal Atomic # 8 Polarization: -4.38 SS G_CDS: -0.57 Total: -4.95 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: -5.23 Total: -6.58 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -10.67 -12.50 -23.17 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_12335838.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.292 kcal (2) G-P(sol) polarization free energy of solvation -10.672 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.620 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.501 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.173 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.119 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds