Wall clock time and date at job start Sat Mar 6 2021 14:38:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35896 * 116.99905 * 2 1 4 4 C 1.38712 * 120.05475 * 180.27296 * 3 2 1 5 5 C 1.38166 * 119.94507 * 180.31526 * 4 3 2 6 6 C 1.50707 * 119.97234 * 179.70552 * 5 4 3 7 7 H 1.08997 * 112.84940 * 348.53371 * 6 5 4 8 8 C 1.53778 * 113.61281 * 119.72937 * 6 5 4 9 9 C 1.53776 * 87.08195 * 139.97847 * 8 6 5 10 10 H 1.08998 * 113.61990 * 219.93669 * 9 8 6 11 11 N 1.46504 * 113.61263 * 89.11617 * 9 8 6 12 12 C 1.34776 * 120.00308 * 155.00202 * 11 9 8 13 13 O 1.21598 * 119.99737 * 359.97438 * 12 11 9 14 14 C 1.47579 * 120.00199 * 180.02562 * 12 11 9 15 15 C 1.40201 * 119.83228 * 0.02562 * 14 12 11 16 16 C 1.36227 * 120.38093 * 180.02562 * 15 14 12 17 17 C 1.39891 * 119.95514 * 359.69630 * 16 15 14 18 18 C 1.46256 * 133.83194 * 179.55874 * 17 16 15 19 19 C 1.50699 * 126.48700 * 0.76117 * 18 17 16 20 20 O 1.42901 * 109.46830 * 284.71356 * 19 18 17 21 21 Si 1.86298 * 109.46950 * 164.71793 * 19 18 17 22 22 C 1.34463 * 107.03078 * 180.50277 * 18 17 16 23 23 N 1.36562 * 109.98302 * 0.25959 * 22 18 17 24 24 C 1.37833 * 109.86459 * 0.02562 * 23 22 18 25 25 C 1.38645 * 133.38335 * 179.97438 * 24 23 22 26 26 C 1.53782 * 87.08403 * 334.56832 * 9 8 6 27 27 C 1.38238 * 120.05236 * 359.43912 * 5 4 3 28 28 C 1.38284 * 120.11546 * 0.24328 * 27 5 4 29 29 C 1.38120 * 120.05316 * 0.05181 * 28 27 5 30 30 H 1.09007 * 109.46873 * 299.99724 * 1 2 3 31 31 H 1.09000 * 109.46914 * 59.99646 * 1 2 3 32 32 H 1.09003 * 109.47459 * 179.97438 * 1 2 3 33 33 H 1.08004 * 120.02960 * 0.02562 * 4 3 2 34 34 H 1.09007 * 113.61079 * 25.43496 * 8 6 5 35 35 H 1.08993 * 113.69274 * 254.54158 * 8 6 5 36 36 H 0.97002 * 120.00112 * 334.99954 * 11 9 8 37 37 H 1.08004 * 119.80623 * 359.97438 * 15 14 12 38 38 H 1.07991 * 120.02636 * 180.02562 * 16 15 14 39 39 H 1.08991 * 109.47351 * 44.71503 * 19 18 17 40 40 H 0.96708 * 114.00246 * 299.99864 * 20 19 18 41 41 H 1.48506 * 109.99834 * 180.02562 * 21 19 18 42 42 H 1.48502 * 110.00011 * 301.31529 * 21 19 18 43 43 H 1.07995 * 125.00815 * 180.22801 * 22 18 17 44 44 H 0.97003 * 125.06864 * 180.02562 * 23 22 18 45 45 H 1.07995 * 120.16356 * 359.97438 * 25 24 23 46 46 H 1.09002 * 113.61654 * 139.97243 * 26 9 8 47 47 H 1.09001 * 113.61163 * 270.88556 * 26 9 8 48 48 H 1.08007 * 119.94333 * 180.27093 * 27 5 4 49 49 H 1.08003 * 119.97236 * 180.02562 * 28 27 5 50 50 H 1.08001 * 120.02750 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4311 1.2848 -0.0057 5 6 4.0560 2.5170 0.0009 6 6 5.5609 2.5981 0.0014 7 1 6.0364 1.6368 0.1960 8 6 6.1385 3.3354 -1.2182 9 6 7.1515 3.9741 -0.2536 10 1 7.3484 5.0260 -0.4607 11 7 8.3766 3.1886 -0.0847 12 6 9.5209 3.7962 0.2868 13 8 9.5365 4.9964 0.4813 14 6 10.7550 3.0050 0.4565 15 6 10.7333 1.6216 0.2298 16 6 11.8659 0.8804 0.3836 17 6 13.0606 1.5010 0.7637 18 6 14.4169 1.0168 1.0191 19 6 14.8959 -0.4076 0.9067 20 8 14.4256 -1.1581 2.0282 21 14 16.7584 -0.4358 0.8776 22 6 15.1569 2.0841 1.3674 23 7 14.3841 3.2099 1.3615 24 6 13.0929 2.8898 1.0005 25 6 11.9354 3.6364 0.8422 26 6 6.1156 3.7470 0.8600 27 6 3.3020 3.6757 0.0015 28 6 1.9209 3.6047 0.0005 29 6 1.2915 2.3753 0.0001 30 1 -0.3633 0.5138 0.8901 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3634 -1.0277 -0.0005 33 1 4.0206 0.3799 -0.0106 34 1 5.4475 4.0518 -1.6629 35 1 6.5941 2.6737 -1.9548 36 1 8.3642 2.2312 -0.2401 37 1 9.8132 1.1407 -0.0677 38 1 11.8428 -0.1848 0.2071 39 1 14.5114 -0.8488 -0.0127 40 1 14.7295 -0.8213 2.8823 41 1 17.2435 -1.8351 0.7664 42 1 17.2608 0.3676 -0.2658 43 1 16.2075 2.0550 1.6159 44 1 14.6971 4.1020 1.5788 45 1 11.9491 4.7021 1.0164 46 1 6.5528 3.4162 1.8021 47 1 5.4185 4.5758 0.9834 48 1 3.7923 4.6380 0.0022 49 1 1.3341 4.5114 0.0006 50 1 0.2129 2.3204 -0.0002 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_12335838.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:38:06 Heat of formation + Delta-G solvation = 14.745967 kcal Electronic energy + Delta-G solvation = -32633.667946 eV Core-core repulsion = 28173.112384 eV Total energy + Delta-G solvation = -4460.555562 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -42.45927 -41.67662 -40.91278 -39.77222 -38.02074 -37.75192 -37.41610 -34.58356 -33.23609 -32.17369 -31.13087 -30.71568 -30.31995 -28.24074 -26.69954 -26.57339 -26.15732 -24.59932 -23.65035 -23.56240 -22.33204 -21.62590 -20.78080 -20.27770 -19.44106 -18.75394 -18.29198 -17.58151 -17.25406 -17.15015 -16.95011 -16.88465 -16.67481 -16.25299 -16.11615 -15.88593 -15.74907 -15.51218 -15.18293 -15.10344 -14.83032 -14.74238 -14.47899 -14.36561 -14.25136 -14.01349 -14.00104 -13.49625 -13.26267 -13.20991 -13.07523 -12.68596 -12.63808 -12.30342 -12.27681 -12.27266 -12.11398 -11.92224 -11.65432 -11.58549 -11.26469 -11.13630 -10.77955 -10.28695 -10.15851 -9.74986 -9.36238 -9.15757 -8.78245 -4.96735 -0.32523 0.32411 0.36908 0.47614 1.39306 1.42673 1.71942 1.89379 1.89966 2.06287 2.25105 2.34985 2.73445 2.86005 3.45179 3.59090 3.63583 3.69905 3.72257 3.76165 3.87444 3.90173 3.93248 3.96119 4.08552 4.12484 4.18599 4.27539 4.30744 4.34344 4.38591 4.49727 4.51546 4.54796 4.58616 4.62776 4.66847 4.70560 4.77583 4.78265 4.86218 4.96540 4.96915 5.01884 5.09612 5.14067 5.21320 5.34033 5.41269 5.46254 5.50021 5.55472 5.62070 5.70179 5.82396 5.98339 6.43446 6.44780 6.55728 6.91377 7.12187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.110 3.890 4 C -0.166 4.166 5 C -0.034 4.034 6 C -0.068 4.068 7 H 0.108 0.892 8 C -0.123 4.123 9 C 0.115 3.885 10 H 0.090 0.910 11 N -0.695 5.695 12 C 0.565 3.435 13 O -0.580 6.580 14 C -0.138 4.138 15 C -0.107 4.107 16 C -0.087 4.087 17 C -0.082 4.082 18 C -0.236 4.236 19 C -0.039 4.039 20 O -0.562 6.562 21 Si 0.794 3.206 22 C 0.097 3.903 23 N -0.577 5.577 24 C 0.066 3.934 25 C -0.065 4.065 26 C -0.140 4.140 27 C -0.160 4.160 28 C -0.083 4.083 29 C -0.222 4.222 30 H 0.063 0.937 31 H 0.063 0.937 32 H 0.115 0.885 33 H 0.131 0.869 34 H 0.105 0.895 35 H 0.087 0.913 36 H 0.414 0.586 37 H 0.150 0.850 38 H 0.136 0.864 39 H 0.096 0.904 40 H 0.393 0.607 41 H -0.306 1.306 42 H -0.285 1.285 43 H 0.220 0.780 44 H 0.435 0.565 45 H 0.130 0.870 46 H 0.067 0.933 47 H 0.102 0.898 48 H 0.140 0.860 49 H 0.143 0.857 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.708 -0.188 1.537 2.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.065 3.935 4 C -0.185 4.185 5 C -0.034 4.034 6 C -0.086 4.086 7 H 0.126 0.874 8 C -0.161 4.161 9 C 0.010 3.990 10 H 0.108 0.892 11 N -0.347 5.347 12 C 0.354 3.646 13 O -0.461 6.461 14 C -0.142 4.142 15 C -0.127 4.127 16 C -0.105 4.105 17 C -0.087 4.087 18 C -0.243 4.243 19 C -0.149 4.149 20 O -0.369 6.369 21 Si 0.700 3.300 22 C -0.032 4.032 23 N -0.180 5.180 24 C -0.041 4.041 25 C -0.086 4.086 26 C -0.178 4.178 27 C -0.178 4.178 28 C -0.101 4.101 29 C -0.240 4.240 30 H 0.081 0.919 31 H 0.082 0.918 32 H 0.133 0.867 33 H 0.149 0.851 34 H 0.123 0.877 35 H 0.106 0.894 36 H 0.252 0.748 37 H 0.168 0.832 38 H 0.154 0.846 39 H 0.113 0.887 40 H 0.243 0.757 41 H -0.234 1.234 42 H -0.212 1.212 43 H 0.236 0.764 44 H 0.276 0.724 45 H 0.148 0.852 46 H 0.086 0.914 47 H 0.120 0.880 48 H 0.157 0.843 49 H 0.161 0.839 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.246 0.035 0.789 2.381 hybrid contribution -1.003 0.021 -0.348 1.062 sum 1.243 0.055 0.441 1.321 Atomic orbital electron populations 1.23295 0.76652 1.05382 1.02111 1.86040 1.23288 1.27316 1.88794 1.19286 0.92817 0.84652 0.96794 1.20505 0.91498 0.98853 1.07602 1.19605 0.95450 0.91890 0.96422 1.21614 0.89993 0.99495 0.97527 0.87372 1.23374 0.96842 0.99886 0.95971 1.21884 0.83232 0.96436 0.97474 0.89154 1.45480 1.07958 1.12344 1.68891 1.18351 0.83900 0.86642 0.75678 1.90764 1.86315 1.16337 1.52694 1.19444 0.92801 0.94389 1.07598 1.20885 0.99467 0.91665 1.00690 1.20393 0.90763 1.00430 0.98958 1.19588 0.94848 0.92214 1.02052 1.20857 0.92550 0.96395 1.14512 1.24541 1.11589 0.87402 0.91359 1.86464 1.77542 1.55536 1.17394 0.94074 0.71617 0.78400 0.85926 1.22367 0.98071 0.83929 0.98857 1.41818 1.06247 1.11126 1.58804 1.18114 0.86793 0.94345 1.04825 1.20138 0.89575 0.99741 0.99178 1.23556 0.97790 0.98816 0.97651 1.21176 0.93821 0.98764 1.04071 1.21242 0.94975 0.97558 0.96366 1.21486 1.00927 0.92409 1.09206 0.91885 0.91822 0.86679 0.85089 0.87684 0.89444 0.74766 0.83224 0.84624 0.88666 0.75715 1.23406 1.21163 0.76417 0.72436 0.85231 0.91437 0.87987 0.84250 0.83876 0.84254 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 113.37 1.11 1.08 16 2 O -0.34 -2.03 10.50 -92.38 -0.97 -3.00 16 3 C 0.11 0.63 6.69 22.51 0.15 0.78 16 4 C -0.17 -0.73 9.65 22.37 0.22 -0.52 16 5 C -0.03 -0.05 5.29 -19.88 -0.11 -0.15 16 6 C -0.07 0.15 3.86 -11.01 -0.04 0.11 16 7 H 0.11 -0.43 8.09 -2.39 -0.02 -0.45 16 8 C -0.12 0.40 7.29 31.12 0.23 0.63 16 9 C 0.12 0.04 4.32 45.52 0.20 0.24 16 10 H 0.09 0.39 7.46 -2.39 -0.02 0.37 16 11 N -0.70 -0.58 5.21 -443.15 -2.31 -2.89 16 12 C 0.57 4.22 7.76 86.71 0.67 4.89 16 13 O -0.58 -8.81 15.91 -4.02 -0.06 -8.88 16 14 C -0.14 -0.74 5.87 -20.08 -0.12 -0.86 16 15 C -0.11 -0.15 9.46 22.28 0.21 0.06 16 16 C -0.09 -0.27 10.03 22.20 0.22 -0.04 16 17 C -0.08 -0.33 6.35 -20.14 -0.13 -0.46 16 18 C -0.24 0.10 5.57 -18.64 -0.10 0.00 16 19 C -0.04 0.04 3.06 71.24 0.22 0.26 16 20 O -0.56 -0.09 12.88 -148.98 -1.92 -2.01 16 21 Si 0.79 -3.79 30.75 68.60 2.11 -1.68 16 22 C 0.10 -0.56 10.43 83.09 0.87 0.31 16 23 N -0.58 2.06 6.07 -187.71 -1.14 0.92 16 24 C 0.07 0.21 7.26 38.95 0.28 0.50 16 25 C -0.06 -0.37 9.61 22.63 0.22 -0.15 16 26 C -0.14 0.09 7.25 31.12 0.23 0.31 16 27 C -0.16 -0.11 8.61 22.28 0.19 0.08 16 28 C -0.08 -0.09 10.04 22.25 0.22 0.13 16 29 C -0.22 -0.62 9.04 22.36 0.20 -0.42 16 30 H 0.06 -0.21 7.66 -2.38 -0.02 -0.22 16 31 H 0.06 -0.22 7.66 -2.39 -0.02 -0.24 16 32 H 0.11 -0.58 8.14 -2.39 -0.02 -0.60 16 33 H 0.13 0.37 8.05 -2.91 -0.02 0.35 16 34 H 0.10 -0.40 7.72 -2.38 -0.02 -0.42 16 35 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 36 H 0.41 -1.89 6.69 -92.71 -0.62 -2.51 16 37 H 0.15 -0.74 6.36 -2.91 -0.02 -0.76 16 38 H 0.14 0.14 8.06 -2.92 -0.02 0.12 16 39 H 0.10 0.13 7.96 -2.39 -0.02 0.11 16 40 H 0.39 -3.22 8.70 -74.05 -0.64 -3.86 16 41 H -0.31 -1.18 7.11 99.48 0.71 -0.47 16 42 H -0.28 -0.01 7.11 99.48 0.71 0.70 16 43 H 0.22 -3.24 6.35 -2.91 -0.02 -3.26 16 44 H 0.44 -4.03 8.96 -92.71 -0.83 -4.86 16 45 H 0.13 0.78 7.62 -2.91 -0.02 0.76 16 46 H 0.07 0.10 8.14 -2.39 -0.02 0.08 16 47 H 0.10 -0.16 6.31 -2.39 -0.02 -0.18 16 48 H 0.14 -0.38 6.65 -2.91 -0.02 -0.40 16 49 H 0.14 -0.47 8.06 -2.91 -0.02 -0.49 16 50 H 0.14 -0.12 6.30 -2.91 -0.02 -0.14 16 Total: 0.00 -27.19 411.87 -0.38 -27.58 By element: Atomic # 1 Polarization: -15.77 SS G_CDS: -1.03 Total: -16.80 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: 4.94 Total: 6.76 kcal Atomic # 7 Polarization: 1.48 SS G_CDS: -3.45 Total: -1.97 kcal Atomic # 8 Polarization: -10.94 SS G_CDS: -2.95 Total: -13.89 kcal Atomic # 14 Polarization: -3.79 SS G_CDS: 2.11 Total: -1.68 kcal Total: -27.19 -0.38 -27.58 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_12335838.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.324 kcal (2) G-P(sol) polarization free energy of solvation -27.193 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.130 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.384 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.578 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.746 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds