Wall clock time and date at job start Sat Mar 6 2021 14:38:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35903 * 117.00049 * 2 1 4 4 C 1.38715 * 120.05514 * 179.97438 * 3 2 1 5 5 C 1.38165 * 119.94424 * 179.72952 * 4 3 2 6 6 C 1.50697 * 119.97358 * 179.97438 * 5 4 3 7 7 H 1.09003 * 112.84845 * 348.80563 * 6 5 4 8 8 C 1.53784 * 113.61592 * 119.99777 * 6 5 4 9 9 C 1.53781 * 87.07951 * 139.98201 * 8 6 5 10 10 H 1.08994 * 113.60829 * 220.01919 * 9 8 6 11 11 N 1.46501 * 113.61282 * 89.20035 * 9 8 6 12 12 C 1.34774 * 119.99597 * 154.99390 * 11 9 8 13 13 O 1.21556 * 120.00151 * 0.02562 * 12 11 9 14 14 C 1.47848 * 119.99793 * 179.97438 * 12 11 9 15 15 C 1.39540 * 120.13999 * 359.73046 * 14 12 11 16 16 C 1.38075 * 119.84255 * 179.76860 * 15 14 12 17 17 Br 1.89097 * 119.93767 * 180.25091 * 16 15 14 18 18 C 1.38421 * 120.12232 * 0.48197 * 16 15 14 19 19 C 1.38364 * 120.28621 * 359.79370 * 18 16 15 20 20 C 1.50697 * 119.92462 * 179.97438 * 19 18 16 21 21 O 1.42899 * 109.47021 * 244.97454 * 20 19 18 22 22 Si 1.86299 * 109.47067 * 4.97370 * 20 19 18 23 23 C 1.37942 * 120.15475 * 359.95140 * 19 18 16 24 24 C 1.53779 * 113.61528 * 217.49777 * 6 5 4 25 25 C 1.38248 * 120.05352 * 359.97438 * 5 4 3 26 26 C 1.38282 * 120.11148 * 0.02944 * 25 5 4 27 27 C 1.38123 * 120.05864 * 359.95155 * 26 25 5 28 28 H 1.08999 * 109.47281 * 59.99918 * 1 2 3 29 29 H 1.09002 * 109.47292 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47202 * 299.99846 * 1 2 3 31 31 H 1.08000 * 120.02702 * 359.75288 * 4 3 2 32 32 H 1.09000 * 113.61310 * 254.53240 * 8 6 5 33 33 H 1.09000 * 113.61318 * 25.43120 * 8 6 5 34 34 H 0.97003 * 119.99836 * 335.00286 * 11 9 8 35 35 H 1.08005 * 120.08184 * 0.02562 * 15 14 12 36 36 H 1.08000 * 119.85958 * 179.76538 * 18 16 15 37 37 H 1.09002 * 109.47026 * 124.97605 * 20 19 18 38 38 H 0.96705 * 114.00062 * 60.00097 * 21 20 19 39 39 H 1.48499 * 109.99924 * 180.02562 * 22 20 19 40 40 H 1.48496 * 110.00323 * 301.32025 * 22 20 19 41 41 H 1.07994 * 120.06760 * 180.02562 * 23 19 18 42 42 H 1.09002 * 113.61259 * 334.55990 * 24 6 5 43 43 H 1.09000 * 113.61466 * 105.47095 * 24 6 5 44 44 H 1.08000 * 119.94403 * 179.97438 * 25 5 4 45 45 H 1.08004 * 119.97412 * 179.97438 * 26 25 5 46 46 H 1.07998 * 120.02778 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.0560 2.5171 -0.0051 6 6 5.5608 2.5981 -0.0040 7 1 6.0362 1.6380 0.1965 8 6 6.1393 3.3285 -1.2274 9 6 7.1517 3.9727 -0.2656 10 1 7.3476 5.0237 -0.4778 11 7 8.3774 3.1891 -0.0927 12 6 9.5210 3.7996 0.2760 13 8 9.5353 5.0002 0.4654 14 6 10.7579 3.0087 0.4511 15 6 10.7432 1.6293 0.2409 16 6 11.9029 0.8974 0.4015 17 35 11.8877 -0.9709 0.1104 18 6 13.0756 1.5281 0.7798 19 6 13.0948 2.8948 0.9951 20 6 14.3758 3.5730 1.4074 21 8 14.2291 4.1082 2.7242 22 14 15.7671 2.3341 1.3920 23 6 11.9441 3.6380 0.8329 24 6 6.1149 3.7519 0.8484 25 6 3.3019 3.6757 -0.0118 26 6 1.9209 3.6047 -0.0123 27 6 1.2914 2.3753 -0.0071 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 4.0206 0.3799 0.0050 32 1 6.5954 2.6613 -1.9588 33 1 5.4488 4.0422 -1.6767 34 1 8.3659 2.2309 -0.2436 35 1 9.8278 1.1359 -0.0508 36 1 13.9794 0.9510 0.9079 37 1 14.6003 4.3801 0.7100 38 1 14.0278 3.4447 3.3983 39 1 17.0360 2.9904 1.7974 40 1 15.4586 1.2124 2.3150 41 1 11.9607 4.7047 1.0010 42 1 5.4177 4.5814 0.9665 43 1 6.5513 3.4266 1.7928 44 1 3.7922 4.6380 -0.0158 45 1 1.3340 4.5113 -0.0171 46 1 0.2128 2.3203 -0.0079 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_12335870.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:38:34 Heat of formation + Delta-G solvation = -10.658135 kcal Electronic energy + Delta-G solvation = -29942.676825 eV Core-core repulsion = 25618.617466 eV Total energy + Delta-G solvation = -4324.059359 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -41.90427 -41.24520 -40.47485 -39.47960 -37.91650 -37.78343 -34.82678 -33.62923 -32.99519 -32.01742 -30.89267 -30.46036 -28.24579 -27.08484 -26.70601 -26.49126 -24.97944 -23.57387 -22.84109 -22.35328 -21.67670 -20.32943 -19.23085 -18.74437 -17.94123 -17.67812 -17.29157 -17.21806 -16.92699 -16.67483 -16.55618 -16.42389 -16.17101 -15.82683 -15.70900 -15.44904 -14.99334 -14.90932 -14.44598 -14.37574 -14.28686 -14.11767 -13.99244 -13.49578 -13.30769 -13.26087 -13.19565 -13.03993 -12.68089 -12.30836 -12.28829 -12.12483 -11.95829 -11.82238 -11.66518 -11.59263 -11.46384 -11.27465 -11.21527 -10.70474 -10.39519 -10.11827 -9.91090 -9.74863 -9.15729 -4.97043 -0.52259 -0.16301 0.32439 0.43426 0.47673 1.20978 1.50526 1.54728 1.88351 1.95773 2.35010 2.45117 2.73519 3.25026 3.32164 3.42665 3.47415 3.68472 3.71715 3.80657 3.86862 3.87781 3.95441 3.96095 4.08852 4.18580 4.19958 4.27440 4.29522 4.34248 4.38496 4.54154 4.55303 4.61118 4.65293 4.70554 4.76175 4.78352 4.83240 4.92576 4.96100 5.01421 5.07481 5.09304 5.13421 5.34174 5.36596 5.46740 5.51721 5.69489 5.82394 6.34823 6.42358 6.43423 7.02351 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.165 4.165 5 C -0.034 4.034 6 C -0.068 4.068 7 H 0.110 0.890 8 C -0.122 4.122 9 C 0.115 3.885 10 H 0.092 0.908 11 N -0.694 5.694 12 C 0.563 3.437 13 O -0.570 6.570 14 C -0.136 4.136 15 C -0.044 4.044 16 C -0.099 4.099 17 Br -0.029 7.029 18 C -0.062 4.062 19 C -0.113 4.113 20 C -0.083 4.083 21 O -0.545 6.545 22 Si 0.762 3.238 23 C -0.028 4.028 24 C -0.141 4.141 25 C -0.160 4.160 26 C -0.084 4.084 27 C -0.222 4.222 28 H 0.063 0.937 29 H 0.115 0.885 30 H 0.062 0.938 31 H 0.132 0.868 32 H 0.090 0.910 33 H 0.105 0.895 34 H 0.414 0.586 35 H 0.161 0.839 36 H 0.155 0.845 37 H 0.131 0.869 38 H 0.388 0.612 39 H -0.297 1.297 40 H -0.273 1.273 41 H 0.132 0.868 42 H 0.101 0.899 43 H 0.067 0.933 44 H 0.140 0.860 45 H 0.143 0.857 46 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.178 -3.896 -3.038 5.399 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.184 4.184 5 C -0.034 4.034 6 C -0.087 4.087 7 H 0.128 0.872 8 C -0.160 4.160 9 C 0.010 3.990 10 H 0.110 0.890 11 N -0.345 5.345 12 C 0.351 3.649 13 O -0.450 6.450 14 C -0.140 4.140 15 C -0.064 4.064 16 C -0.179 4.179 17 Br 0.056 6.944 18 C -0.082 4.082 19 C -0.114 4.114 20 C -0.192 4.192 21 O -0.354 6.354 22 Si 0.666 3.334 23 C -0.047 4.047 24 C -0.179 4.179 25 C -0.178 4.178 26 C -0.102 4.102 27 C -0.241 4.241 28 H 0.082 0.918 29 H 0.133 0.867 30 H 0.081 0.919 31 H 0.150 0.850 32 H 0.108 0.892 33 H 0.123 0.877 34 H 0.253 0.747 35 H 0.179 0.821 36 H 0.173 0.827 37 H 0.149 0.851 38 H 0.237 0.763 39 H -0.225 1.225 40 H -0.199 1.199 41 H 0.150 0.850 42 H 0.119 0.881 43 H 0.086 0.914 44 H 0.157 0.843 45 H 0.160 0.840 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -1.407 -3.818 -2.875 4.982 hybrid contribution -1.015 0.321 1.255 1.645 sum -2.422 -3.497 -1.620 4.552 Atomic orbital electron populations 1.23289 0.76680 1.05375 1.02087 1.86039 1.23255 1.27316 1.88793 1.19297 0.92865 0.84619 0.96794 1.20509 0.91445 0.98883 1.07541 1.19610 0.95522 0.91837 0.96428 1.21630 0.89943 0.99520 0.97563 0.87210 1.23379 0.96781 0.99904 0.95957 1.21898 0.83086 0.96517 0.97500 0.88985 1.45488 1.07992 1.12274 1.68757 1.18319 0.83758 0.86732 0.76078 1.90804 1.86032 1.16106 1.52066 1.19856 0.94052 0.93680 1.06372 1.21460 0.98220 0.91867 0.94838 1.21728 0.96375 0.92161 1.07589 1.96864 1.99175 1.02918 1.95401 1.21422 0.97677 0.93929 0.95138 1.20245 0.96403 0.93149 1.01628 1.25295 1.00272 1.07327 0.86303 1.86620 1.92767 1.38679 1.17287 0.94139 0.73812 0.75458 0.89957 1.21276 0.90630 1.00944 0.91881 1.23562 0.97808 0.98847 0.97694 1.21176 0.93788 0.98798 1.04069 1.21240 0.95033 0.97532 0.96407 1.21485 1.00915 0.92451 1.09222 0.91832 0.86679 0.91937 0.84979 0.89187 0.87707 0.74743 0.82106 0.82744 0.85128 0.76281 1.22502 1.19891 0.84987 0.88061 0.91384 0.84263 0.83969 0.84336 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.07 16 2 O -0.34 -1.73 10.50 -92.45 -0.97 -2.70 16 3 C 0.11 0.52 6.69 22.51 0.15 0.67 16 4 C -0.17 -0.51 9.65 22.37 0.22 -0.30 16 5 C -0.03 0.00 5.29 -19.88 -0.11 -0.11 16 6 C -0.07 0.28 3.86 -11.01 -0.04 0.24 16 7 H 0.11 -0.69 8.09 -2.39 -0.02 -0.71 16 8 C -0.12 0.66 7.29 31.12 0.23 0.89 16 9 C 0.12 -0.23 4.32 45.52 0.20 -0.03 16 10 H 0.09 0.18 7.46 -2.39 -0.02 0.17 16 11 N -0.69 1.66 5.22 -442.91 -2.31 -0.65 16 12 C 0.56 2.24 7.77 86.79 0.67 2.92 16 13 O -0.57 -7.18 15.95 -3.89 -0.06 -7.24 16 14 C -0.14 -0.11 5.87 -20.09 -0.12 -0.23 16 15 C -0.04 0.16 9.28 22.55 0.21 0.36 16 16 C -0.10 0.28 6.22 22.27 0.14 0.42 16 17 Br -0.03 0.08 33.69 -20.37 -0.69 -0.60 16 18 C -0.06 0.19 8.40 22.34 0.19 0.38 16 19 C -0.11 0.15 5.34 -19.91 -0.11 0.05 16 20 C -0.08 0.15 2.80 71.23 0.20 0.35 16 21 O -0.55 -1.04 12.83 -148.98 -1.91 -2.95 16 22 Si 0.76 -2.74 29.87 68.60 2.05 -0.69 16 23 C -0.03 -0.06 9.23 22.53 0.21 0.15 16 24 C -0.14 0.35 7.25 31.12 0.23 0.58 16 25 C -0.16 0.06 8.61 22.28 0.19 0.25 16 26 C -0.08 -0.02 10.04 22.25 0.22 0.20 16 27 C -0.22 -0.46 9.04 22.36 0.20 -0.26 16 28 H 0.06 -0.26 7.65 -2.39 -0.02 -0.27 16 29 H 0.11 -0.65 8.14 -2.39 -0.02 -0.67 16 30 H 0.06 -0.24 7.67 -2.39 -0.02 -0.26 16 31 H 0.13 0.18 8.05 -2.91 -0.02 0.15 16 32 H 0.09 -0.65 8.14 -2.39 -0.02 -0.66 16 33 H 0.10 -0.58 7.72 -2.39 -0.02 -0.60 16 34 H 0.41 -3.38 6.74 -92.71 -0.62 -4.00 16 35 H 0.16 -1.44 6.41 -2.91 -0.02 -1.46 16 36 H 0.16 -0.92 4.82 -2.91 -0.01 -0.94 16 37 H 0.13 -0.42 7.96 -2.39 -0.02 -0.44 16 38 H 0.39 -1.57 8.70 -74.05 -0.64 -2.21 16 39 H -0.30 -1.28 7.11 99.48 0.71 -0.57 16 40 H -0.27 0.20 7.01 99.48 0.70 0.90 16 41 H 0.13 0.69 7.65 -2.91 -0.02 0.67 16 42 H 0.10 -0.31 6.31 -2.39 -0.02 -0.32 16 43 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 44 H 0.14 -0.53 6.65 -2.91 -0.02 -0.55 16 45 H 0.14 -0.55 8.06 -2.91 -0.02 -0.57 16 46 H 0.14 -0.20 6.30 -2.91 -0.02 -0.22 16 Total: 0.00 -19.78 399.60 -0.09 -19.88 By element: Atomic # 1 Polarization: -12.44 SS G_CDS: -0.19 Total: -12.63 kcal Atomic # 6 Polarization: 3.60 SS G_CDS: 3.99 Total: 7.59 kcal Atomic # 7 Polarization: 1.66 SS G_CDS: -2.31 Total: -0.65 kcal Atomic # 8 Polarization: -9.94 SS G_CDS: -2.94 Total: -12.89 kcal Atomic # 14 Polarization: -2.74 SS G_CDS: 2.05 Total: -0.69 kcal Atomic # 35 Polarization: 0.08 SS G_CDS: -0.69 Total: -0.60 kcal Total: -19.78 -0.09 -19.88 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_12335870.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.217 kcal (2) G-P(sol) polarization free energy of solvation -19.785 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.568 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.090 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.875 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.658 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds