Wall clock time and date at job start Sat Mar 6 2021 14:38:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35899 * 116.99862 * 2 1 4 4 C 1.38717 * 120.05331 * 179.97438 * 3 2 1 5 5 C 1.38158 * 119.94370 * 180.02562 * 4 3 2 6 6 C 1.50703 * 119.97457 * 179.97438 * 5 4 3 7 7 H 1.09004 * 112.84361 * 348.80751 * 6 5 4 8 8 C 1.53775 * 113.61635 * 120.00378 * 6 5 4 9 9 C 1.53774 * 87.08413 * 139.98497 * 8 6 5 10 10 H 1.09002 * 113.61753 * 219.93859 * 9 8 6 11 11 N 1.46494 * 113.61655 * 89.11225 * 9 8 6 12 12 C 1.34778 * 119.99820 * 155.00000 * 11 9 8 13 13 O 1.21697 * 120.00213 * 0.02562 * 12 11 9 14 14 C 1.46436 * 119.99879 * 180.02562 * 12 11 9 15 15 C 1.34814 * 119.99794 * 180.02562 * 14 12 11 16 16 C 1.47206 * 119.99752 * 179.97438 * 15 14 12 17 17 C 1.39836 * 120.16774 * 0.27872 * 16 15 14 18 18 C 1.37893 * 119.82402 * 180.23013 * 17 16 15 19 19 C 1.38403 * 120.16807 * 359.46824 * 18 17 16 20 20 C 1.50700 * 119.82534 * 180.27866 * 19 18 17 21 21 O 1.42901 * 109.47331 * 300.00138 * 20 19 18 22 22 Si 1.86307 * 109.47038 * 179.97438 * 20 19 18 23 23 C 1.38405 * 120.34861 * 0.30391 * 19 18 17 24 24 C 1.37887 * 120.16795 * 359.95072 * 23 19 18 25 25 C 1.53781 * 113.61728 * 217.50247 * 6 5 4 26 26 C 1.38244 * 120.05594 * 0.26308 * 5 4 3 27 27 C 1.38293 * 120.11191 * 359.48750 * 26 5 4 28 28 C 1.38119 * 120.05013 * 0.50823 * 27 26 5 29 29 H 1.09002 * 109.47343 * 59.99902 * 1 2 3 30 30 H 1.09000 * 109.47446 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.46967 * 299.99488 * 1 2 3 32 32 H 1.08000 * 120.02990 * 0.05666 * 4 3 2 33 33 H 1.09006 * 113.61361 * 25.43530 * 8 6 5 34 34 H 1.09000 * 113.69488 * 254.54695 * 8 6 5 35 35 H 0.96995 * 120.00163 * 335.00724 * 11 9 8 36 36 H 1.07996 * 120.00111 * 359.97438 * 14 12 11 37 37 H 1.07996 * 120.00090 * 0.02562 * 15 14 12 38 38 H 1.08004 * 120.09359 * 359.97438 * 17 16 15 39 39 H 1.08002 * 119.91884 * 179.75241 * 18 17 16 40 40 H 1.09000 * 109.47531 * 60.00493 * 20 19 18 41 41 H 0.96700 * 113.99633 * 180.02562 * 21 20 19 42 42 H 1.48503 * 109.99752 * 60.00278 * 22 20 19 43 43 H 1.48503 * 109.99810 * 181.31586 * 22 20 19 44 44 H 1.07995 * 119.91286 * 179.97438 * 23 19 18 45 45 H 1.08003 * 120.08925 * 180.02562 * 24 23 19 46 46 H 1.09003 * 113.61303 * 105.46664 * 25 6 5 47 47 H 1.08996 * 113.61319 * 334.56912 * 25 6 5 48 48 H 1.08004 * 119.94876 * 179.71474 * 26 5 4 49 49 H 1.07996 * 119.97653 * 180.27452 * 27 26 5 50 50 H 1.08009 * 120.02497 * 179.72424 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4312 1.2848 0.0005 5 6 4.0560 2.5170 0.0011 6 6 5.5608 2.5981 0.0022 7 1 6.0363 1.6369 0.1976 8 6 6.1390 3.3349 -1.2174 9 6 7.1517 3.9740 -0.2527 10 1 7.3486 5.0258 -0.4602 11 7 8.3765 3.1886 -0.0827 12 6 9.5206 3.7964 0.2890 13 8 9.5360 4.9976 0.4838 14 6 10.7451 3.0114 0.4584 15 6 11.8894 3.6194 0.8307 16 6 13.1202 2.8302 1.0016 17 6 13.1079 1.4507 0.7730 18 6 14.2638 0.7175 0.9398 19 6 15.4366 1.3453 1.3217 20 6 16.6969 0.5375 1.4956 21 8 16.4909 -0.4559 2.5019 22 14 18.0900 1.6630 2.0089 23 6 15.4580 2.7111 1.5451 24 6 14.3091 3.4571 1.3876 25 6 6.1152 3.7474 0.8605 26 6 3.3020 3.6757 0.0066 27 6 1.9209 3.6047 0.0008 28 6 1.2915 2.3753 0.0002 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 4.0207 0.3799 0.0000 33 1 5.4483 4.0510 -1.6628 34 1 6.5950 2.6728 -1.9535 35 1 8.3642 2.2312 -0.2377 36 1 10.7314 1.9454 0.2860 37 1 11.9028 4.6852 1.0044 38 1 12.1944 0.9600 0.4707 39 1 14.2550 -0.3486 0.7675 40 1 16.9507 0.0526 0.5529 41 1 17.2630 -1.0141 2.6673 42 1 17.7566 2.3307 3.2928 43 1 19.3458 0.8836 2.1529 44 1 16.3769 3.1937 1.8433 45 1 14.3273 4.5228 1.5620 46 1 6.5518 3.4172 1.8031 47 1 5.4180 4.5762 0.9833 48 1 3.7922 4.6380 0.0116 49 1 1.3340 4.5113 0.0007 50 1 0.2128 2.3203 0.0002 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_12360594.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:38:44 Heat of formation + Delta-G solvation = -4.804924 kcal Electronic energy + Delta-G solvation = -30079.849422 eV Core-core repulsion = 25812.098121 eV Total energy + Delta-G solvation = -4267.751301 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.166 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -41.65308 -40.87050 -40.54412 -39.56968 -37.95515 -37.78478 -35.14998 -34.39121 -32.18035 -32.09276 -31.47718 -30.83322 -28.30371 -27.37427 -26.74832 -25.99294 -24.16920 -23.89261 -23.51812 -22.34311 -21.94444 -20.53519 -20.15582 -18.87985 -18.62238 -18.38366 -17.53448 -17.23907 -17.05394 -16.85095 -16.66616 -16.47959 -16.35140 -16.00205 -15.70125 -15.53296 -15.24141 -15.10652 -14.75510 -14.43574 -14.39155 -14.29466 -14.08336 -14.00415 -13.84453 -13.55259 -13.43116 -13.28365 -13.20123 -13.15768 -12.69760 -12.33686 -12.24235 -12.12834 -12.06860 -11.75943 -11.67028 -11.60390 -11.31302 -11.27276 -10.89180 -10.55348 -10.04655 -10.00152 -9.71957 -9.23938 -9.11068 -5.01229 -0.53722 0.35499 0.37433 0.52496 0.91801 1.22685 1.55072 1.91261 2.15414 2.30281 2.32346 2.75810 2.77315 3.25783 3.42356 3.55122 3.66462 3.69401 3.72158 3.79239 3.85243 3.90466 3.92225 4.03531 4.11023 4.15005 4.16847 4.19004 4.20957 4.25545 4.36045 4.36745 4.47096 4.51676 4.57099 4.61597 4.66290 4.71017 4.81419 4.84927 4.91717 4.93197 4.98921 5.05926 5.09480 5.12489 5.14464 5.36498 5.37202 5.45808 5.50824 5.57635 5.60682 5.71065 5.81764 5.86003 6.36159 6.45697 6.52942 7.27957 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.149 4.149 5 C -0.032 4.032 6 C -0.074 4.074 7 H 0.099 0.901 8 C -0.134 4.134 9 C 0.119 3.881 10 H 0.106 0.894 11 N -0.710 5.710 12 C 0.551 3.449 13 O -0.541 6.541 14 C -0.216 4.216 15 C -0.013 4.013 16 C -0.075 4.075 17 C -0.099 4.099 18 C -0.094 4.094 19 C -0.061 4.061 20 C -0.079 4.079 21 O -0.536 6.536 22 Si 0.682 3.318 23 C -0.117 4.117 24 C -0.087 4.087 25 C -0.143 4.143 26 C -0.154 4.154 27 C -0.076 4.076 28 C -0.213 4.213 29 H 0.056 0.944 30 H 0.101 0.899 31 H 0.056 0.944 32 H 0.129 0.871 33 H 0.099 0.901 34 H 0.077 0.923 35 H 0.402 0.598 36 H 0.130 0.870 37 H 0.138 0.862 38 H 0.130 0.870 39 H 0.128 0.872 40 H 0.079 0.921 41 H 0.381 0.619 42 H -0.254 1.254 43 H -0.260 1.260 44 H 0.131 0.869 45 H 0.135 0.865 46 H 0.075 0.925 47 H 0.097 0.903 48 H 0.125 0.875 49 H 0.125 0.875 50 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.169 -1.783 -2.951 3.452 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.168 4.168 5 C -0.032 4.032 6 C -0.093 4.093 7 H 0.117 0.883 8 C -0.172 4.172 9 C 0.014 3.986 10 H 0.124 0.876 11 N -0.360 5.360 12 C 0.341 3.659 13 O -0.420 6.420 14 C -0.237 4.237 15 C -0.032 4.032 16 C -0.075 4.075 17 C -0.117 4.117 18 C -0.112 4.112 19 C -0.061 4.061 20 C -0.188 4.188 21 O -0.343 6.343 22 Si 0.583 3.417 23 C -0.134 4.134 24 C -0.105 4.105 25 C -0.181 4.181 26 C -0.173 4.173 27 C -0.094 4.094 28 C -0.232 4.232 29 H 0.075 0.925 30 H 0.119 0.881 31 H 0.075 0.925 32 H 0.147 0.853 33 H 0.118 0.882 34 H 0.096 0.904 35 H 0.237 0.763 36 H 0.148 0.852 37 H 0.156 0.844 38 H 0.148 0.852 39 H 0.146 0.854 40 H 0.097 0.903 41 H 0.229 0.771 42 H -0.179 1.179 43 H -0.186 1.186 44 H 0.149 0.851 45 H 0.153 0.847 46 H 0.094 0.906 47 H 0.115 0.885 48 H 0.143 0.857 49 H 0.143 0.857 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 0.257 -0.661 -2.193 2.305 hybrid contribution -0.401 -1.719 0.413 1.813 sum -0.144 -2.380 -1.780 2.975 Atomic orbital electron populations 1.23084 0.78100 1.04184 1.01443 1.86078 1.21614 1.26917 1.88598 1.19037 0.92328 0.84249 0.96015 1.20300 0.91308 0.98202 1.06953 1.19448 0.94723 0.92154 0.96873 1.21617 0.90851 0.99214 0.97573 0.88315 1.23419 0.97636 0.99981 0.96194 1.21845 0.83310 0.97116 0.96348 0.87560 1.45550 1.08701 1.11579 1.70191 1.18336 0.83656 0.87497 0.76425 1.90834 1.85826 1.14814 1.50519 1.22874 0.92967 1.00498 1.07348 1.22410 0.90382 1.00045 0.90404 1.19058 0.93400 0.93428 1.01588 1.21447 0.98493 0.93080 0.98686 1.20939 0.91696 1.00171 0.98373 1.19436 0.94474 0.93240 0.98943 1.24841 1.03228 0.96421 0.94351 1.86585 1.41151 1.47997 1.58582 0.95056 0.75747 0.83973 0.86970 1.20904 0.98474 0.93251 1.00807 1.21325 0.91362 1.00266 0.97510 1.23571 0.98009 0.98388 0.98183 1.20931 0.93634 0.98179 1.04508 1.20947 0.94587 0.97056 0.96860 1.21269 1.00154 0.92470 1.09262 0.92545 0.88056 0.92546 0.85322 0.88225 0.90390 0.76321 0.85207 0.84380 0.85217 0.85371 0.90347 0.77110 1.17873 1.18559 0.85148 0.84722 0.90633 0.88494 0.85667 0.85655 0.85507 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.80 10.50 -19.42 -0.20 -1.00 16 3 C 0.13 0.32 6.69 -39.22 -0.26 0.05 16 4 C -0.15 -0.27 9.65 -39.43 -0.38 -0.65 16 5 C -0.03 -0.02 5.29 -104.65 -0.55 -0.57 16 6 C -0.07 0.08 3.86 -90.96 -0.35 -0.27 16 7 H 0.10 -0.19 8.09 -51.93 -0.42 -0.61 16 8 C -0.13 0.22 7.29 -25.93 -0.19 0.03 16 9 C 0.12 -0.04 4.32 -67.12 -0.29 -0.33 16 10 H 0.11 0.15 7.46 -51.93 -0.39 -0.24 16 11 N -0.71 0.39 5.26 -54.41 -0.29 0.10 16 12 C 0.55 1.14 7.74 -12.96 -0.10 1.04 16 13 O -0.54 -3.27 15.83 5.19 0.08 -3.19 16 14 C -0.22 0.00 9.41 -37.50 -0.35 -0.35 16 15 C -0.01 -0.01 9.46 -37.15 -0.35 -0.36 16 16 C -0.07 -0.04 5.87 -105.06 -0.62 -0.65 16 17 C -0.10 0.00 9.41 -39.11 -0.37 -0.37 16 18 C -0.09 -0.06 9.59 -39.65 -0.38 -0.44 16 19 C -0.06 -0.05 5.43 -104.50 -0.57 -0.61 16 20 C -0.08 0.04 2.81 36.01 0.10 0.14 16 21 O -0.54 -0.44 12.74 -35.23 -0.45 -0.89 16 22 Si 0.68 -0.79 29.77 -169.99 -5.06 -5.85 16 23 C -0.12 -0.01 8.65 -39.65 -0.34 -0.35 16 24 C -0.09 0.00 9.80 -39.11 -0.38 -0.39 16 25 C -0.14 0.08 7.25 -25.92 -0.19 -0.11 16 26 C -0.15 -0.07 8.62 -39.56 -0.34 -0.41 16 27 C -0.08 -0.05 10.04 -39.60 -0.40 -0.45 16 28 C -0.21 -0.27 9.04 -39.44 -0.36 -0.63 16 29 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 30 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 31 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 32 H 0.13 0.11 8.05 -52.49 -0.42 -0.31 16 33 H 0.10 -0.17 7.73 -51.93 -0.40 -0.57 16 34 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 35 H 0.40 -1.26 8.68 -40.82 -0.35 -1.62 16 36 H 0.13 -0.34 6.07 -52.49 -0.32 -0.66 16 37 H 0.14 0.14 7.52 -52.49 -0.39 -0.26 16 38 H 0.13 -0.27 6.17 -52.48 -0.32 -0.59 16 39 H 0.13 -0.03 8.06 -52.49 -0.42 -0.46 16 40 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 41 H 0.38 -1.18 8.74 45.56 0.40 -0.78 16 42 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 43 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 44 H 0.13 -0.22 4.85 -52.49 -0.25 -0.48 16 45 H 0.13 -0.25 8.06 -52.48 -0.42 -0.68 16 46 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 47 H 0.10 -0.08 6.29 -51.93 -0.33 -0.41 16 48 H 0.13 -0.13 6.64 -52.48 -0.35 -0.48 16 49 H 0.13 -0.15 8.06 -52.49 -0.42 -0.58 16 50 H 0.13 -0.06 6.30 -52.48 -0.33 -0.39 16 LS Contribution 412.82 15.07 6.22 6.22 Total: 0.00 -9.43 412.82 -12.20 -21.64 By element: Atomic # 1 Polarization: -5.49 SS G_CDS: -6.83 Total: -12.32 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: -5.68 Total: -4.71 kcal Atomic # 7 Polarization: 0.39 SS G_CDS: -0.29 Total: 0.10 kcal Atomic # 8 Polarization: -4.52 SS G_CDS: -0.57 Total: -5.09 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.06 Total: -5.85 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -9.43 -12.20 -21.64 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_12360594.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.833 kcal (2) G-P(sol) polarization free energy of solvation -9.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.400 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.205 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.638 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.805 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds