Wall clock time and date at job start Sat Mar 6 2021 14:38:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35901 * 116.99639 * 2 1 4 4 C 1.38719 * 120.05160 * 179.97438 * 3 2 1 5 5 C 1.38167 * 119.94063 * 179.97438 * 4 3 2 6 6 C 1.50697 * 119.96842 * 179.97438 * 5 4 3 7 7 H 1.08994 * 112.91111 * 348.75212 * 6 5 4 8 8 C 1.53786 * 113.61152 * 120.00582 * 6 5 4 9 9 C 1.53786 * 87.07991 * 139.98216 * 8 6 5 10 10 H 1.09006 * 113.60962 * 219.93370 * 9 8 6 11 11 N 1.46498 * 113.61782 * 89.11629 * 9 8 6 12 12 C 1.34773 * 119.99967 * 156.52778 * 11 9 8 13 13 O 1.21569 * 120.00103 * 359.97438 * 12 11 9 14 14 C 1.47695 * 119.99648 * 180.02562 * 12 11 9 15 15 C 1.39808 * 120.15241 * 180.02562 * 14 12 11 16 16 F 1.35099 * 120.08623 * 359.97438 * 15 14 12 17 17 C 1.38315 * 119.83153 * 180.02562 * 15 14 12 18 18 C 1.38185 * 120.14304 * 0.25759 * 17 15 14 19 19 C 1.50700 * 119.83836 * 179.74387 * 18 17 15 20 20 O 1.42896 * 109.47474 * 14.99885 * 19 18 17 21 21 Si 1.86299 * 109.47187 * 134.99773 * 19 18 17 22 22 C 1.38654 * 120.31820 * 359.48219 * 18 17 15 23 23 F 1.35093 * 119.92121 * 180.25790 * 22 18 17 24 24 C 1.38070 * 120.16404 * 0.51559 * 22 18 17 25 25 C 1.53780 * 87.17172 * 334.52063 * 9 8 6 26 26 C 1.38245 * 120.05823 * 0.28159 * 5 4 3 27 27 C 1.38294 * 120.10807 * 359.44250 * 26 5 4 28 28 C 1.38121 * 120.05672 * 0.55779 * 27 26 5 29 29 H 1.08994 * 109.47409 * 299.99842 * 1 2 3 30 30 H 1.09000 * 109.47153 * 59.99902 * 1 2 3 31 31 H 1.09002 * 109.47238 * 179.97438 * 1 2 3 32 32 H 1.07998 * 120.02822 * 0.02562 * 4 3 2 33 33 H 1.08998 * 113.61502 * 25.42747 * 8 6 5 34 34 H 1.08997 * 113.68476 * 254.53978 * 8 6 5 35 35 H 0.97002 * 120.00043 * 336.52779 * 11 9 8 36 36 H 1.08002 * 119.92438 * 179.97438 * 17 15 14 37 37 H 1.08999 * 109.46868 * 254.99367 * 19 18 17 38 38 H 0.96700 * 114.00500 * 59.99993 * 20 19 18 39 39 H 1.48501 * 110.00547 * 179.97438 * 21 19 18 40 40 H 1.48502 * 110.00053 * 301.31838 * 21 19 18 41 41 H 1.07997 * 120.07976 * 179.72210 * 24 22 18 42 42 H 1.09003 * 113.60955 * 140.02160 * 25 9 8 43 43 H 1.08994 * 113.61717 * 270.92550 * 25 9 8 44 44 H 1.07992 * 119.94481 * 179.70452 * 26 5 4 45 45 H 1.08003 * 119.96883 * 180.29785 * 27 26 5 46 46 H 1.07996 * 120.02603 * 179.70261 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4311 1.2849 0.0005 5 6 4.0559 2.5172 0.0000 6 6 5.5607 2.5982 0.0012 7 1 6.0372 1.6380 0.1982 8 6 6.1389 3.3340 -1.2192 9 6 7.1516 3.9740 -0.2549 10 1 7.3485 5.0256 -0.4634 11 7 8.3765 3.1888 -0.0842 12 6 9.5131 3.7919 0.3168 13 8 9.5220 4.9876 0.5364 14 6 10.7482 3.0003 0.4883 15 6 11.9289 3.6225 0.9047 16 9 11.9440 4.9508 1.1512 17 6 13.0819 2.8750 1.0627 18 6 13.0694 1.5174 0.8048 19 6 14.3310 0.7106 0.9736 20 8 15.2837 1.4672 1.7231 21 14 13.9410 -0.8693 1.8807 22 6 11.9005 0.8932 0.3968 23 9 11.8962 -0.4354 0.1519 24 6 10.7422 1.6269 0.2349 25 6 6.1161 3.7504 0.8598 26 6 3.3019 3.6759 0.0048 27 6 1.9208 3.6048 -0.0015 28 6 1.2913 2.3753 -0.0009 29 1 -0.3634 0.5138 0.8899 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3634 -1.0277 -0.0005 32 1 4.0206 0.3800 0.0005 33 1 5.4482 4.0496 -1.6653 34 1 6.5949 2.6711 -1.9545 35 1 8.3696 2.2348 -0.2598 36 1 13.9949 3.3541 1.3839 37 1 14.7448 0.4740 -0.0066 38 1 14.9820 1.7135 2.6082 39 1 15.1768 -1.6745 2.0531 40 1 13.3464 -0.5606 3.2060 41 1 9.8336 1.1401 -0.0873 42 1 6.5537 3.4224 1.8027 43 1 5.4193 4.5797 0.9812 44 1 3.7921 4.6381 0.0092 45 1 1.3339 4.5114 -0.0026 46 1 0.2128 2.3204 -0.0010 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_12360598.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:38:46 Heat of formation + Delta-G solvation = -99.824559 kcal Electronic energy + Delta-G solvation = -33102.213478 eV Core-core repulsion = 28175.197624 eV Total energy + Delta-G solvation = -4927.015854 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -50.30016 -50.11381 -41.80388 -41.09817 -40.31955 -39.50607 -37.92291 -37.71937 -34.80187 -33.02020 -32.02126 -31.43079 -30.88588 -28.25432 -28.03343 -26.67894 -26.02911 -24.20703 -23.99153 -23.53114 -22.37140 -21.97064 -20.36052 -19.56807 -19.07845 -18.68878 -18.50786 -17.88318 -17.44436 -17.27101 -17.21286 -16.92766 -16.75411 -16.65956 -16.63922 -16.08672 -16.04870 -15.78965 -15.72796 -15.63958 -15.42282 -15.02449 -14.55889 -14.42546 -14.29616 -14.11219 -13.97024 -13.83196 -13.48523 -13.31226 -13.22347 -13.19106 -12.96313 -12.68100 -12.63552 -12.29010 -12.11062 -12.07285 -11.64518 -11.57393 -11.28939 -11.24882 -11.11651 -10.30212 -10.15050 -9.74971 -9.72496 -9.14014 -4.79974 -0.78120 -0.27305 0.34209 0.49344 1.10121 1.46446 1.56532 1.83220 1.90684 2.28532 2.36672 2.75152 2.76707 2.83396 3.11073 3.16384 3.43442 3.46971 3.52833 3.70544 3.74883 3.82792 3.89138 3.97144 4.10611 4.20288 4.23193 4.29170 4.35539 4.36201 4.40352 4.42611 4.56031 4.59328 4.63440 4.69812 4.72063 4.74937 4.76078 4.80537 4.86508 4.97884 5.03822 5.11289 5.14240 5.35936 5.40473 5.47305 5.53048 5.71441 5.83975 6.33415 6.34810 6.45031 7.01548 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.339 6.339 3 C 0.109 3.891 4 C -0.164 4.164 5 C -0.034 4.034 6 C -0.067 4.067 7 H 0.115 0.885 8 C -0.121 4.121 9 C 0.115 3.885 10 H 0.089 0.911 11 N -0.688 5.688 12 C 0.561 3.439 13 O -0.564 6.564 14 C -0.159 4.159 15 C 0.136 3.864 16 F -0.130 7.130 17 C -0.127 4.127 18 C -0.089 4.089 19 C -0.080 4.080 20 O -0.542 6.542 21 Si 0.747 3.253 22 C 0.086 3.914 23 F -0.090 7.090 24 C -0.066 4.066 25 C -0.142 4.142 26 C -0.161 4.161 27 C -0.085 4.085 28 C -0.223 4.223 29 H 0.062 0.938 30 H 0.063 0.937 31 H 0.115 0.885 32 H 0.135 0.865 33 H 0.103 0.897 34 H 0.093 0.907 35 H 0.417 0.583 36 H 0.166 0.834 37 H 0.148 0.852 38 H 0.390 0.610 39 H -0.289 1.289 40 H -0.283 1.283 41 H 0.190 0.810 42 H 0.068 0.932 43 H 0.099 0.901 44 H 0.138 0.862 45 H 0.141 0.859 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.322 -5.189 -2.472 7.191 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.253 6.253 3 C 0.064 3.936 4 C -0.182 4.182 5 C -0.034 4.034 6 C -0.085 4.085 7 H 0.133 0.867 8 C -0.159 4.159 9 C 0.010 3.990 10 H 0.107 0.893 11 N -0.341 5.341 12 C 0.348 3.652 13 O -0.443 6.443 14 C -0.163 4.163 15 C 0.115 3.885 16 F -0.108 7.108 17 C -0.146 4.146 18 C -0.091 4.091 19 C -0.189 4.189 20 O -0.350 6.350 21 Si 0.650 3.350 22 C 0.066 3.934 23 F -0.069 7.069 24 C -0.085 4.085 25 C -0.180 4.180 26 C -0.179 4.179 27 C -0.103 4.103 28 C -0.241 4.241 29 H 0.080 0.920 30 H 0.081 0.919 31 H 0.133 0.867 32 H 0.153 0.847 33 H 0.121 0.879 34 H 0.112 0.888 35 H 0.257 0.743 36 H 0.183 0.817 37 H 0.165 0.835 38 H 0.240 0.760 39 H -0.216 1.216 40 H -0.209 1.209 41 H 0.207 0.793 42 H 0.087 0.913 43 H 0.117 0.883 44 H 0.156 0.844 45 H 0.159 0.841 46 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -3.776 -5.088 -2.162 6.694 hybrid contribution 0.035 0.952 0.851 1.278 sum -3.741 -4.136 -1.310 5.728 Atomic orbital electron populations 1.23283 0.76730 1.05362 1.02046 1.86040 1.23199 1.27283 1.88789 1.19309 0.92931 0.84577 0.96799 1.20525 0.91382 0.98937 1.07388 1.19617 0.95605 0.91779 0.96385 1.21694 0.89834 0.99629 0.97366 0.86719 1.23364 0.96639 0.99905 0.95992 1.21900 0.83062 0.96403 0.97646 0.89329 1.45401 1.08110 1.12890 1.67669 1.18073 0.83662 0.86594 0.76853 1.90869 1.85678 1.16331 1.51453 1.19801 0.93277 0.94821 1.08394 1.17972 0.94177 0.78031 0.98305 1.91586 1.97000 1.31161 1.91031 1.20861 0.98084 0.92900 1.02759 1.20511 0.95941 0.94291 0.98315 1.25184 0.87882 1.02269 1.03532 1.86592 1.42556 1.73649 1.32212 0.93934 0.82504 0.78135 0.80397 1.17077 0.93704 0.78649 1.03959 1.91232 1.95839 1.29044 1.90764 1.21360 0.99318 0.90821 0.96968 1.23613 0.97775 0.98910 0.97724 1.21178 0.93773 0.98852 1.04107 1.21233 0.95072 0.97510 0.96511 1.21480 1.00893 0.92487 1.09267 0.91987 0.91879 0.86670 0.84697 0.87892 0.88830 0.74348 0.81682 0.83473 0.75958 1.21611 1.20940 0.79315 0.91280 0.88291 0.84389 0.84119 0.84426 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.06 16 2 O -0.34 -1.47 10.50 -92.44 -0.97 -2.45 16 3 C 0.11 0.44 6.69 22.51 0.15 0.59 16 4 C -0.16 -0.33 9.65 22.37 0.22 -0.12 16 5 C -0.03 0.03 5.29 -19.88 -0.11 -0.08 16 6 C -0.07 0.37 3.87 -10.92 -0.04 0.32 16 7 H 0.11 -0.97 8.09 -2.39 -0.02 -0.99 16 8 C -0.12 0.80 7.29 31.12 0.23 1.03 16 9 C 0.12 -0.33 4.29 45.52 0.20 -0.13 16 10 H 0.09 0.16 7.50 -2.38 -0.02 0.14 16 11 N -0.69 2.66 5.21 -443.04 -2.31 0.35 16 12 C 0.56 2.15 7.77 86.74 0.67 2.82 16 13 O -0.56 -7.76 14.96 -3.93 -0.06 -7.82 16 14 C -0.16 -0.04 5.88 -20.06 -0.12 -0.16 16 15 C 0.14 0.50 7.28 22.67 0.17 0.67 16 16 F -0.13 -1.37 15.55 44.97 0.70 -0.67 16 17 C -0.13 0.11 9.20 22.28 0.20 0.31 16 18 C -0.09 0.32 5.14 -19.78 -0.10 0.22 16 19 C -0.08 0.32 2.97 71.24 0.21 0.53 16 20 O -0.54 0.75 11.63 -148.98 -1.73 -0.98 16 21 Si 0.75 -2.27 29.54 68.60 2.03 -0.24 16 22 C 0.09 -0.52 6.65 22.33 0.15 -0.37 16 23 F -0.09 0.74 13.67 44.97 0.61 1.35 16 24 C -0.07 0.46 9.52 22.57 0.21 0.68 16 25 C -0.14 0.46 7.27 31.21 0.23 0.69 16 26 C -0.16 0.13 8.62 22.28 0.19 0.32 16 27 C -0.09 0.00 10.04 22.26 0.22 0.22 16 28 C -0.22 -0.37 9.04 22.36 0.20 -0.17 16 29 H 0.06 -0.26 7.66 -2.39 -0.02 -0.28 16 30 H 0.06 -0.28 7.66 -2.39 -0.02 -0.30 16 31 H 0.12 -0.71 8.14 -2.39 -0.02 -0.73 16 32 H 0.14 -0.03 8.05 -2.91 -0.02 -0.05 16 33 H 0.10 -0.65 7.73 -2.39 -0.02 -0.67 16 34 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 35 H 0.42 -4.64 6.74 -92.71 -0.62 -5.26 16 36 H 0.17 -0.40 7.06 -2.91 -0.02 -0.42 16 37 H 0.15 -0.93 7.96 -2.39 -0.02 -0.95 16 38 H 0.39 -2.74 8.42 -74.06 -0.62 -3.37 16 39 H -0.29 -1.17 7.11 99.48 0.71 -0.46 16 40 H -0.28 -0.51 7.11 99.48 0.71 0.19 16 41 H 0.19 -2.83 6.40 -2.91 -0.02 -2.85 16 42 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 43 H 0.10 -0.33 6.30 -2.39 -0.02 -0.34 16 44 H 0.14 -0.56 6.63 -2.91 -0.02 -0.58 16 45 H 0.14 -0.55 8.06 -2.91 -0.02 -0.57 16 46 H 0.14 -0.23 6.30 -2.91 -0.02 -0.25 16 Total: 0.00 -22.85 386.54 2.12 -20.72 By element: Atomic # 1 Polarization: -18.57 SS G_CDS: -0.14 Total: -18.71 kcal Atomic # 6 Polarization: 4.45 SS G_CDS: 4.00 Total: 8.45 kcal Atomic # 7 Polarization: 2.66 SS G_CDS: -2.31 Total: 0.35 kcal Atomic # 8 Polarization: -8.48 SS G_CDS: -2.76 Total: -11.25 kcal Atomic # 9 Polarization: -0.63 SS G_CDS: 1.31 Total: 0.68 kcal Atomic # 14 Polarization: -2.27 SS G_CDS: 2.03 Total: -0.24 kcal Total: -22.85 2.12 -20.72 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_12360598.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.102 kcal (2) G-P(sol) polarization free energy of solvation -22.845 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.123 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.722 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.825 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds