Wall clock time and date at job start Sat Mar 6 2021 14:38:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35898 * 116.99964 * 2 1 4 4 C 1.38722 * 120.05327 * 179.97438 * 3 2 1 5 5 C 1.38161 * 119.94139 * 180.02562 * 4 3 2 6 6 C 1.50706 * 119.97263 * 179.97438 * 5 4 3 7 7 H 1.08997 * 112.90212 * 11.25002 * 6 5 4 8 8 C 1.54052 * 113.61869 * 142.50377 * 6 5 4 9 9 C 1.53781 * 86.98090 * 139.97983 * 8 6 5 10 10 H 1.09002 * 113.61390 * 219.97549 * 9 8 6 11 11 N 1.46498 * 113.61396 * 89.16641 * 9 8 6 12 12 C 1.34768 * 120.00297 * 105.86001 * 11 9 8 13 13 O 1.21586 * 120.00323 * 0.02562 * 12 11 9 14 14 C 1.47538 * 119.99927 * 179.97438 * 12 11 9 15 15 C 1.40139 * 120.19043 * 180.25573 * 14 12 11 16 16 O 1.35650 * 120.15564 * 0.02562 * 15 14 12 17 17 C 1.42902 * 117.00606 * 180.30119 * 16 15 14 18 18 C 1.38716 * 119.69577 * 180.32064 * 15 14 12 19 19 C 1.38051 * 120.08716 * 359.69957 * 18 15 14 20 20 C 1.38548 * 120.38770 * 359.97438 * 19 18 15 21 21 C 1.50703 * 119.84990 * 179.97438 * 20 19 18 22 22 O 1.42898 * 109.47310 * 245.02477 * 21 20 19 23 23 Si 1.86306 * 109.46993 * 5.02556 * 21 20 19 24 24 C 1.37790 * 120.30368 * 0.02632 * 20 19 18 25 25 C 1.53776 * 113.61329 * 240.00145 * 6 5 4 26 26 C 1.38251 * 120.05555 * 0.25537 * 5 4 3 27 27 C 1.38282 * 120.11257 * 359.48844 * 26 5 4 28 28 C 1.38132 * 120.05428 * 0.51465 * 27 26 5 29 29 H 1.09001 * 109.47115 * 179.97438 * 1 2 3 30 30 H 1.09003 * 109.47323 * 300.00563 * 1 2 3 31 31 H 1.09003 * 109.46757 * 60.00839 * 1 2 3 32 32 H 1.08000 * 120.02547 * 0.04255 * 4 3 2 33 33 H 1.08999 * 113.61162 * 25.47759 * 8 6 5 34 34 H 1.09000 * 113.69663 * 254.49511 * 8 6 5 35 35 H 0.97006 * 119.99442 * 285.85906 * 11 9 8 36 36 H 1.08996 * 109.46762 * 300.00697 * 17 16 15 37 37 H 1.09001 * 109.46761 * 59.99929 * 17 16 15 38 38 H 1.08998 * 109.47481 * 179.97438 * 17 16 15 39 39 H 1.08001 * 119.95623 * 179.67419 * 18 15 14 40 40 H 1.07991 * 119.80792 * 179.97438 * 19 18 15 41 41 H 1.08996 * 109.47123 * 125.02646 * 21 20 19 42 42 H 0.96707 * 113.99984 * 60.00446 * 22 21 20 43 43 H 1.48505 * 109.99754 * 58.67702 * 23 21 20 44 44 H 1.48493 * 110.00101 * 179.97438 * 23 21 20 45 45 H 1.08002 * 120.04466 * 179.97438 * 24 20 19 46 46 H 1.08999 * 113.61749 * 105.47085 * 25 6 5 47 47 H 1.08999 * 113.61589 * 334.56840 * 25 6 5 48 48 H 1.08006 * 119.94134 * 179.72228 * 26 5 4 49 49 H 1.07994 * 119.97334 * 180.22950 * 27 26 5 50 50 H 1.07996 * 120.02569 * 179.76514 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4312 1.2848 0.0005 5 6 4.0560 2.5170 0.0011 6 6 5.5609 2.5981 0.0022 7 1 6.0376 1.6376 -0.1933 8 6 6.1176 3.7496 -0.8565 9 6 7.1512 3.9740 0.2598 10 1 7.3479 5.0257 0.4678 11 7 8.3765 3.1887 0.0916 12 6 9.5137 3.7914 -0.3081 13 8 9.5230 4.9871 -0.5286 14 6 10.7477 3.0006 -0.4770 15 6 11.9337 3.6242 -0.8872 16 8 11.9531 4.9585 -1.1306 17 6 13.1964 5.5233 -1.5518 18 6 13.0864 2.8696 -1.0492 19 6 13.0653 1.5118 -0.8010 20 6 11.8963 0.8928 -0.3887 21 6 11.8868 -0.5904 -0.1218 22 8 11.0316 -1.2388 -1.0653 23 14 13.6166 -1.2623 -0.2874 24 6 10.7421 1.6268 -0.2227 25 6 6.1371 3.3347 1.2230 26 6 3.3019 3.6757 0.0064 27 6 1.9209 3.6048 0.0005 28 6 1.2914 2.3752 0.0001 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3634 0.5139 0.8899 31 1 -0.3633 0.5137 -0.8901 32 1 4.0206 0.3798 0.0003 33 1 5.4209 4.5788 -0.9795 34 1 6.5566 3.4209 -1.7984 35 1 8.3692 2.2348 0.2679 36 1 13.9508 5.3547 -0.7834 37 1 13.5134 5.0513 -2.4818 38 1 13.0733 6.5944 -1.7119 39 1 14.0015 3.3450 -1.3703 40 1 13.9651 0.9286 -0.9289 41 1 11.5202 -0.7755 0.8879 42 1 11.2983 -1.1165 -1.9868 43 1 14.5225 -0.5734 0.6666 44 1 13.6209 -2.7240 -0.0259 45 1 9.8331 1.1400 0.0984 46 1 6.5919 2.6713 1.9586 47 1 5.4457 4.0506 1.6674 48 1 3.7923 4.6380 0.0113 49 1 1.3341 4.5113 0.0010 50 1 0.2128 2.3203 -0.0007 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_12496546.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:38:49 Heat of formation + Delta-G solvation = -49.140049 kcal Electronic energy + Delta-G solvation = -32751.052308 eV Core-core repulsion = 28290.922440 eV Total energy + Delta-G solvation = -4460.129868 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -41.94115 -41.38523 -40.60079 -39.41125 -39.17300 -37.84723 -37.09427 -34.62634 -32.70128 -32.00210 -31.77533 -30.85325 -28.52609 -28.24132 -26.71019 -26.36439 -26.14214 -24.98330 -23.58989 -22.89817 -22.16249 -21.57084 -20.31210 -19.43124 -18.80738 -18.33498 -18.08955 -17.26043 -17.18776 -16.97876 -16.85425 -16.71687 -16.67590 -16.19289 -16.04262 -15.86747 -15.79405 -15.61820 -15.32610 -14.73444 -14.53268 -14.47255 -14.43651 -14.28650 -13.99006 -13.67614 -13.52324 -13.42277 -13.25520 -13.16629 -13.08544 -12.68423 -12.42108 -12.30039 -12.13609 -12.11318 -12.01687 -11.80243 -11.65671 -11.59403 -11.26594 -11.02695 -10.37925 -10.28197 -10.03210 -9.75634 -9.29101 -9.16251 -4.97470 -0.26868 0.21636 0.31731 0.46938 1.34443 1.66238 1.76043 2.00517 2.05021 2.27239 2.34519 2.67232 2.72993 3.43842 3.48867 3.56804 3.67305 3.69905 3.73568 3.77016 3.86840 3.94382 3.99294 4.07799 4.15970 4.17911 4.27173 4.31223 4.34245 4.37114 4.37807 4.39477 4.53621 4.56124 4.61055 4.63764 4.69365 4.70461 4.74492 4.76712 4.83879 4.92957 4.96483 5.00344 5.08815 5.10554 5.15226 5.27958 5.33324 5.48011 5.53936 5.56700 5.69831 5.81665 6.30274 6.43063 6.49999 6.81663 7.19874 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.110 3.890 4 C -0.166 4.166 5 C -0.033 4.033 6 C -0.067 4.067 7 H 0.107 0.893 8 C -0.139 4.139 9 C 0.117 3.883 10 H 0.087 0.913 11 N -0.701 5.701 12 C 0.559 3.441 13 O -0.562 6.562 14 C -0.197 4.197 15 C 0.172 3.828 16 O -0.313 6.313 17 C 0.011 3.989 18 C -0.212 4.212 19 C -0.040 4.040 20 C -0.168 4.168 21 C -0.065 4.065 22 O -0.554 6.554 23 Si 0.771 3.229 24 C -0.017 4.017 25 C -0.122 4.122 26 C -0.160 4.160 27 C -0.083 4.083 28 C -0.221 4.221 29 H 0.115 0.885 30 H 0.063 0.937 31 H 0.063 0.937 32 H 0.131 0.869 33 H 0.101 0.899 34 H 0.065 0.935 35 H 0.411 0.589 36 H 0.072 0.928 37 H 0.075 0.925 38 H 0.107 0.893 39 H 0.164 0.836 40 H 0.160 0.840 41 H 0.112 0.888 42 H 0.395 0.605 43 H -0.284 1.284 44 H -0.303 1.303 45 H 0.148 0.852 46 H 0.086 0.914 47 H 0.105 0.895 48 H 0.139 0.861 49 H 0.144 0.856 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.943 -1.974 -1.704 3.252 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.065 3.935 4 C -0.185 4.185 5 C -0.034 4.034 6 C -0.085 4.085 7 H 0.125 0.875 8 C -0.178 4.178 9 C 0.012 3.988 10 H 0.105 0.895 11 N -0.353 5.353 12 C 0.348 3.652 13 O -0.442 6.442 14 C -0.201 4.201 15 C 0.123 3.877 16 O -0.225 6.225 17 C -0.083 4.083 18 C -0.230 4.230 19 C -0.058 4.058 20 C -0.169 4.169 21 C -0.175 4.175 22 O -0.362 6.362 23 Si 0.677 3.323 24 C -0.036 4.036 25 C -0.160 4.160 26 C -0.178 4.178 27 C -0.101 4.101 28 C -0.240 4.240 29 H 0.133 0.867 30 H 0.082 0.918 31 H 0.081 0.919 32 H 0.149 0.851 33 H 0.119 0.881 34 H 0.084 0.916 35 H 0.249 0.751 36 H 0.090 0.910 37 H 0.094 0.906 38 H 0.125 0.875 39 H 0.181 0.819 40 H 0.177 0.823 41 H 0.129 0.871 42 H 0.246 0.754 43 H -0.211 1.211 44 H -0.231 1.231 45 H 0.166 0.834 46 H 0.105 0.895 47 H 0.123 0.877 48 H 0.157 0.843 49 H 0.162 0.838 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 2.208 -1.726 -0.916 2.949 hybrid contribution -0.686 -0.041 0.422 0.807 sum 1.522 -1.768 -0.493 2.384 Atomic orbital electron populations 1.23296 0.76643 1.05383 1.02120 1.86041 1.23292 1.27275 1.88783 1.19281 0.92778 0.84684 0.96772 1.20499 0.91535 0.98811 1.07637 1.19596 0.95385 0.91926 0.96456 1.21638 0.90030 0.99382 0.97468 0.87529 1.23591 0.97808 0.98752 0.97607 1.21834 0.83294 0.96295 0.97404 0.89484 1.45495 1.08452 1.12542 1.68830 1.18289 0.83705 0.86822 0.76342 1.90807 1.85710 1.16267 1.51373 1.19397 0.92531 0.94671 1.13538 1.19413 0.93447 0.83592 0.91226 1.86336 1.36569 1.19066 1.80514 1.23454 0.83972 1.00302 1.00594 1.21489 0.98087 0.95169 1.08276 1.21277 0.97640 0.93972 0.92896 1.20251 0.93971 0.96977 1.05680 1.25061 1.07455 0.89366 0.95605 1.86480 1.54719 1.74560 1.20468 0.93872 0.73484 0.75969 0.88950 1.21104 0.99123 0.90072 0.93312 1.23363 0.96855 0.99855 0.95949 1.21171 0.93852 0.98716 1.04092 1.21244 0.94928 0.97593 0.96343 1.21488 1.00942 0.92369 1.09170 0.86678 0.91813 0.91873 0.85149 0.88072 0.91576 0.75143 0.90956 0.90620 0.87469 0.81872 0.82313 0.87099 0.75446 1.21081 1.23092 0.83421 0.89542 0.87667 0.84322 0.83832 0.84180 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 113.37 1.11 1.08 16 2 O -0.34 -2.12 10.50 -92.41 -0.97 -3.09 16 3 C 0.11 0.67 6.69 22.51 0.15 0.82 16 4 C -0.17 -0.84 9.65 22.37 0.22 -0.62 16 5 C -0.03 -0.08 5.29 -19.88 -0.11 -0.18 16 6 C -0.07 0.07 3.87 -10.92 -0.04 0.03 16 7 H 0.11 -0.28 8.09 -2.39 -0.02 -0.30 16 8 C -0.14 -0.09 7.27 31.21 0.23 0.13 16 9 C 0.12 0.21 4.30 45.52 0.20 0.41 16 10 H 0.09 0.52 7.50 -2.39 -0.02 0.51 16 11 N -0.70 -1.59 5.21 -443.22 -2.31 -3.90 16 12 C 0.56 5.14 7.76 86.70 0.67 5.82 16 13 O -0.56 -9.98 14.78 16.93 0.25 -9.73 16 14 C -0.20 -1.07 5.89 -20.01 -0.12 -1.18 16 15 C 0.17 0.91 6.70 22.85 0.15 1.06 16 16 O -0.31 -2.67 8.57 -68.73 -0.59 -3.25 16 17 C 0.01 -0.02 9.81 113.37 1.11 1.10 16 18 C -0.21 0.35 9.03 22.34 0.20 0.56 16 19 C -0.04 0.17 8.65 22.30 0.19 0.37 16 20 C -0.17 0.46 5.35 -19.90 -0.11 0.35 16 21 C -0.06 0.26 2.79 71.24 0.20 0.45 16 22 O -0.55 1.76 12.83 -148.98 -1.91 -0.15 16 23 Si 0.77 -3.85 29.79 68.60 2.04 -1.81 16 24 C -0.02 0.01 9.16 22.52 0.21 0.21 16 25 C -0.12 0.26 7.29 31.12 0.23 0.49 16 26 C -0.16 -0.22 8.59 22.28 0.19 -0.03 16 27 C -0.08 -0.12 10.04 22.25 0.22 0.10 16 28 C -0.22 -0.69 9.04 22.37 0.20 -0.49 16 29 H 0.11 -0.56 8.14 -2.39 -0.02 -0.58 16 30 H 0.06 -0.21 7.66 -2.39 -0.02 -0.22 16 31 H 0.06 -0.20 7.66 -2.39 -0.02 -0.21 16 32 H 0.13 0.47 8.05 -2.91 -0.02 0.45 16 33 H 0.10 -0.03 6.33 -2.39 -0.02 -0.05 16 34 H 0.07 0.19 8.14 -2.39 -0.02 0.17 16 35 H 0.41 -1.26 6.73 -92.70 -0.62 -1.89 16 36 H 0.07 -0.35 7.66 -2.39 -0.02 -0.37 16 37 H 0.08 -0.40 7.66 -2.39 -0.02 -0.42 16 38 H 0.11 -0.28 8.14 -2.39 -0.02 -0.30 16 39 H 0.16 -1.14 6.30 -2.91 -0.02 -1.16 16 40 H 0.16 -1.58 4.88 -2.92 -0.01 -1.60 16 41 H 0.11 -0.36 7.96 -2.39 -0.02 -0.38 16 42 H 0.40 -4.24 8.70 -74.05 -0.64 -4.89 16 43 H -0.28 0.10 7.11 99.48 0.71 0.81 16 44 H -0.30 -1.03 7.11 99.48 0.71 -0.32 16 45 H 0.15 -0.61 6.40 -2.91 -0.02 -0.63 16 46 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 47 H 0.10 -0.30 7.71 -2.39 -0.02 -0.31 16 48 H 0.14 -0.27 6.67 -2.91 -0.02 -0.29 16 49 H 0.14 -0.42 8.06 -2.91 -0.02 -0.44 16 50 H 0.14 -0.09 6.30 -2.91 -0.02 -0.11 16 Total: 0.00 -25.71 405.77 1.39 -24.32 By element: Atomic # 1 Polarization: -12.63 SS G_CDS: -0.23 Total: -12.86 kcal Atomic # 6 Polarization: 5.37 SS G_CDS: 5.11 Total: 10.48 kcal Atomic # 7 Polarization: -1.59 SS G_CDS: -2.31 Total: -3.90 kcal Atomic # 8 Polarization: -13.00 SS G_CDS: -3.22 Total: -16.22 kcal Atomic # 14 Polarization: -3.85 SS G_CDS: 2.04 Total: -1.81 kcal Total: -25.71 1.39 -24.32 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_12496546.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.824 kcal (2) G-P(sol) polarization free energy of solvation -25.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.534 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.393 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.317 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.140 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds