Wall clock time and date at job start Sat Mar 6 2021 14:38:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35905 * 117.00430 * 2 1 4 4 C 1.38701 * 120.05930 * 180.02562 * 3 2 1 5 5 C 1.38170 * 119.94560 * 179.97438 * 4 3 2 6 6 C 1.50697 * 119.97551 * 180.02562 * 5 4 3 7 7 H 1.09005 * 112.84730 * 348.80294 * 6 5 4 8 8 C 1.53774 * 113.61586 * 119.99743 * 6 5 4 9 9 C 1.53781 * 87.08270 * 139.98480 * 8 6 5 10 10 H 1.09001 * 113.61166 * 219.93787 * 9 8 6 11 11 N 1.46496 * 113.61922 * 89.11649 * 9 8 6 12 12 C 1.34774 * 120.00194 * 155.00335 * 11 9 8 13 13 O 1.21572 * 120.00053 * 0.02562 * 12 11 9 14 14 C 1.47722 * 119.99827 * 179.97438 * 12 11 9 15 15 C 1.39639 * 120.11771 * 180.24607 * 14 12 11 16 16 C 1.37856 * 119.87937 * 180.25365 * 15 14 12 17 17 C 1.50702 * 119.93738 * 179.77704 * 16 15 14 18 18 O 1.42892 * 109.47242 * 14.72306 * 17 16 15 19 19 Si 1.86298 * 109.46915 * 134.72844 * 17 16 15 20 20 C 1.38637 * 120.11647 * 359.49973 * 16 15 14 21 21 F 1.35103 * 119.87470 * 180.23066 * 20 16 15 22 22 C 1.38666 * 120.24143 * 0.25258 * 20 16 15 23 23 C 1.37823 * 120.12068 * 0.02562 * 22 20 16 24 24 C 1.53779 * 113.61628 * 217.49622 * 6 5 4 25 25 C 1.38250 * 120.05246 * 0.27038 * 5 4 3 26 26 C 1.38285 * 120.11257 * 359.45824 * 25 5 4 27 27 C 1.38128 * 120.05500 * 0.54038 * 26 25 5 28 28 H 1.08993 * 109.47194 * 179.97438 * 1 2 3 29 29 H 1.09005 * 109.47030 * 299.99439 * 1 2 3 30 30 H 1.09003 * 109.47299 * 59.99467 * 1 2 3 31 31 H 1.07998 * 120.02937 * 359.95967 * 4 3 2 32 32 H 1.09001 * 113.61600 * 25.43278 * 8 6 5 33 33 H 1.09005 * 113.61356 * 254.52832 * 8 6 5 34 34 H 0.97006 * 119.99745 * 335.00096 * 11 9 8 35 35 H 1.08001 * 120.05879 * 0.02562 * 15 14 12 36 36 H 1.09000 * 109.46724 * 254.72351 * 17 16 15 37 37 H 0.96703 * 114.00176 * 180.02562 * 18 17 16 38 38 H 1.48506 * 109.99834 * 178.68053 * 19 17 16 39 39 H 1.48502 * 110.00011 * 299.99318 * 19 17 16 40 40 H 1.08004 * 119.94178 * 180.02562 * 22 20 16 41 41 H 1.07996 * 120.05860 * 179.97438 * 23 22 20 42 42 H 1.09003 * 113.61541 * 105.46713 * 24 6 5 43 43 H 1.09006 * 113.61413 * 334.56760 * 24 6 5 44 44 H 1.07996 * 119.93880 * 179.70465 * 25 5 4 45 45 H 1.07995 * 119.97619 * 180.29266 * 26 25 5 46 46 H 1.07999 * 120.02838 * 179.74593 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 -0.0005 5 6 4.0560 2.5171 -0.0011 6 6 5.5608 2.5982 -0.0022 7 1 6.0366 1.6370 0.1925 8 6 6.1371 3.3347 -1.2229 9 6 7.1513 3.9740 -0.2598 10 1 7.3479 5.0258 -0.4679 11 7 8.3765 3.1887 -0.0916 12 6 9.5211 3.7966 0.2783 13 8 9.5367 4.9965 0.4728 14 6 10.7563 3.0045 0.4485 15 6 11.9424 3.6310 0.8367 16 6 13.0936 2.8879 0.9890 17 6 14.3755 3.5635 1.4029 18 8 14.0854 4.8703 1.9029 19 14 15.2048 2.5589 2.7348 20 6 13.0726 1.5195 0.7676 21 9 14.2025 0.7953 0.9228 22 6 11.8963 0.8916 0.3870 23 6 10.7411 1.6258 0.2263 24 6 6.1165 3.7477 0.8550 25 6 3.3019 3.6758 0.0046 26 6 1.9209 3.6048 -0.0005 27 6 1.2914 2.3753 0.0000 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5138 0.8901 30 1 -0.3634 0.5139 -0.8899 31 1 4.0206 0.3799 -0.0003 32 1 5.4457 4.0507 -1.6674 33 1 6.5919 2.6712 -1.9586 34 1 8.3639 2.2312 -0.2464 35 1 11.9588 4.6963 1.0137 36 1 15.0388 3.6429 0.5417 37 1 14.8661 5.3645 2.1882 38 1 16.4860 3.1977 3.1294 39 1 14.3105 2.4432 3.9147 40 1 11.8854 -0.1748 0.2161 41 1 9.8256 1.1357 -0.0706 42 1 6.5546 3.4176 1.7969 43 1 5.4194 4.5765 0.9786 44 1 3.7923 4.6380 0.0090 45 1 1.3340 4.5114 -0.0009 46 1 0.2128 2.3204 0.0001 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_12496548.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:38:53 Heat of formation + Delta-G solvation = -58.609728 kcal Electronic energy + Delta-G solvation = -30314.202747 eV Core-core repulsion = 25858.428078 eV Total energy + Delta-G solvation = -4455.774669 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -50.27556 -41.82781 -41.13300 -40.25975 -39.29916 -37.91000 -37.76716 -34.76484 -32.92088 -32.21565 -31.77367 -30.83839 -28.23823 -27.16277 -26.68952 -26.27944 -24.79213 -23.56746 -23.23442 -22.35207 -21.59809 -20.33212 -19.07271 -18.96571 -18.65495 -18.30674 -17.46122 -17.22798 -17.09083 -16.93068 -16.68925 -16.66579 -16.27100 -16.16716 -16.00061 -15.74110 -15.50037 -15.08270 -14.91663 -14.45368 -14.34987 -14.30273 -14.17285 -14.10180 -13.98896 -13.51796 -13.32103 -13.24233 -13.11697 -12.92255 -12.67517 -12.47040 -12.29259 -12.11038 -11.92676 -11.65200 -11.57747 -11.26358 -11.21164 -11.05440 -10.24225 -9.98519 -9.74294 -9.68197 -9.15135 -4.85515 -0.49799 0.04512 0.33041 0.48237 1.16107 1.47729 1.60993 1.85608 1.96800 2.35671 2.58590 2.74120 2.87026 3.06807 3.42720 3.47382 3.57358 3.70078 3.74521 3.75450 3.88090 3.96682 4.02811 4.10252 4.17745 4.19238 4.28280 4.32277 4.34918 4.39266 4.54349 4.57026 4.62472 4.68290 4.71487 4.79024 4.83139 4.84885 4.91842 4.97539 5.02478 5.07050 5.09149 5.11003 5.15668 5.34762 5.47444 5.52377 5.63839 5.70740 5.82751 6.41734 6.44063 6.48989 7.09268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.339 6.339 3 C 0.109 3.891 4 C -0.164 4.164 5 C -0.034 4.034 6 C -0.066 4.066 7 H 0.114 0.886 8 C -0.121 4.121 9 C 0.114 3.886 10 H 0.087 0.913 11 N -0.691 5.691 12 C 0.561 3.439 13 O -0.579 6.579 14 C -0.158 4.158 15 C -0.031 4.031 16 C -0.133 4.133 17 C -0.082 4.082 18 O -0.556 6.556 19 Si 0.740 3.260 20 C 0.118 3.882 21 F -0.099 7.099 22 C -0.140 4.140 23 C -0.046 4.046 24 C -0.142 4.142 25 C -0.162 4.162 26 C -0.085 4.085 27 C -0.222 4.222 28 H 0.115 0.885 29 H 0.062 0.938 30 H 0.063 0.937 31 H 0.135 0.865 32 H 0.102 0.898 33 H 0.092 0.908 34 H 0.417 0.583 35 H 0.126 0.874 36 H 0.105 0.895 37 H 0.400 0.600 38 H -0.271 1.271 39 H -0.302 1.302 40 H 0.185 0.815 41 H 0.177 0.823 42 H 0.067 0.933 43 H 0.099 0.901 44 H 0.138 0.862 45 H 0.141 0.859 46 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.816 -5.870 -3.382 7.013 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.253 6.253 3 C 0.064 3.936 4 C -0.182 4.182 5 C -0.034 4.034 6 C -0.084 4.084 7 H 0.132 0.868 8 C -0.159 4.159 9 C 0.009 3.991 10 H 0.105 0.895 11 N -0.343 5.343 12 C 0.350 3.650 13 O -0.460 6.460 14 C -0.161 4.161 15 C -0.051 4.051 16 C -0.134 4.134 17 C -0.190 4.190 18 O -0.366 6.366 19 Si 0.644 3.356 20 C 0.098 3.902 21 F -0.077 7.077 22 C -0.158 4.158 23 C -0.065 4.065 24 C -0.181 4.181 25 C -0.179 4.179 26 C -0.103 4.103 27 C -0.241 4.241 28 H 0.134 0.866 29 H 0.080 0.920 30 H 0.081 0.919 31 H 0.153 0.847 32 H 0.121 0.879 33 H 0.111 0.889 34 H 0.256 0.744 35 H 0.144 0.856 36 H 0.123 0.877 37 H 0.250 0.750 38 H -0.198 1.198 39 H -0.230 1.230 40 H 0.202 0.798 41 H 0.194 0.806 42 H 0.086 0.914 43 H 0.117 0.883 44 H 0.156 0.844 45 H 0.159 0.841 46 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -2.008 -5.445 -2.585 6.353 hybrid contribution -0.018 1.268 0.380 1.324 sum -2.027 -4.176 -2.205 5.139 Atomic orbital electron populations 1.23288 0.76702 1.05382 1.02061 1.86038 1.23227 1.27274 1.88788 1.19299 0.92900 0.84590 0.96780 1.20513 0.91408 0.98897 1.07410 1.19621 0.95571 0.91821 0.96401 1.21629 0.89870 0.99572 0.97367 0.86794 1.23368 0.96667 0.99873 0.96005 1.21885 0.83248 0.96421 0.97575 0.89468 1.45422 1.07677 1.12399 1.68803 1.18398 0.83975 0.86718 0.75909 1.90795 1.86213 1.16666 1.52278 1.19987 0.93395 0.95268 1.07470 1.20818 0.90340 1.00700 0.93206 1.19449 0.96292 0.92705 1.04930 1.24728 0.98260 0.89317 1.06736 1.86474 1.38482 1.26936 1.84752 0.94243 0.76962 0.88504 0.75940 1.17729 0.83879 0.87659 1.00906 1.91198 1.48548 1.76538 1.91430 1.21449 0.89899 1.03203 1.01278 1.21538 0.99743 0.90851 0.94346 1.23567 0.97828 0.98941 0.97730 1.21176 0.93808 0.98829 1.04136 1.21231 0.95027 0.97539 0.96490 1.21487 1.00910 0.92461 1.09244 0.86643 0.91977 0.91859 0.84729 0.87935 0.88932 0.74397 0.85576 0.87744 0.74956 1.19773 1.22990 0.79812 0.80622 0.91405 0.88312 0.84440 0.84081 0.84362 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -1.61 10.50 -92.48 -0.97 -2.58 16 3 C 0.11 0.49 6.69 22.51 0.15 0.64 16 4 C -0.16 -0.44 9.65 22.36 0.22 -0.22 16 5 C -0.03 0.00 5.29 -19.88 -0.11 -0.10 16 6 C -0.07 0.29 3.86 -11.02 -0.04 0.24 16 7 H 0.11 -0.83 8.09 -2.38 -0.02 -0.85 16 8 C -0.12 0.65 7.29 31.12 0.23 0.88 16 9 C 0.11 -0.15 4.32 45.52 0.20 0.05 16 10 H 0.09 0.30 7.46 -2.39 -0.02 0.28 16 11 N -0.69 1.46 5.21 -443.03 -2.31 -0.85 16 12 C 0.56 3.25 7.77 86.75 0.67 3.92 16 13 O -0.58 -9.02 15.94 -3.94 -0.06 -9.08 16 14 C -0.16 -0.42 5.87 -20.09 -0.12 -0.54 16 15 C -0.03 -0.22 8.91 22.52 0.20 -0.02 16 16 C -0.13 -0.46 5.15 -19.86 -0.10 -0.56 16 17 C -0.08 -0.15 2.96 71.24 0.21 0.06 16 18 O -0.56 -2.52 11.47 -148.98 -1.71 -4.23 16 19 Si 0.74 1.12 29.57 68.60 2.03 3.15 16 20 C 0.12 -0.15 6.67 22.47 0.15 0.00 16 21 F -0.10 0.30 13.70 44.97 0.62 0.92 16 22 C -0.14 0.86 10.01 22.27 0.22 1.08 16 23 C -0.05 0.27 9.54 22.52 0.21 0.48 16 24 C -0.14 0.28 7.25 31.12 0.23 0.50 16 25 C -0.16 0.01 8.62 22.28 0.19 0.20 16 26 C -0.08 -0.05 10.04 22.25 0.22 0.18 16 27 C -0.22 -0.47 9.04 22.37 0.20 -0.26 16 28 H 0.12 -0.68 8.14 -2.39 -0.02 -0.70 16 29 H 0.06 -0.24 7.66 -2.38 -0.02 -0.26 16 30 H 0.06 -0.26 7.66 -2.39 -0.02 -0.28 16 31 H 0.13 0.06 8.05 -2.91 -0.02 0.04 16 32 H 0.10 -0.53 7.73 -2.39 -0.02 -0.55 16 33 H 0.09 -0.71 8.14 -2.38 -0.02 -0.73 16 34 H 0.42 -3.91 6.73 -92.70 -0.62 -4.54 16 35 H 0.13 1.53 6.71 -2.91 -0.02 1.51 16 36 H 0.10 -0.25 7.96 -2.39 -0.02 -0.27 16 37 H 0.40 -1.51 8.74 -74.06 -0.65 -2.16 16 38 H -0.27 -1.16 7.11 99.48 0.71 -0.45 16 39 H -0.30 -3.00 7.11 99.48 0.71 -2.30 16 40 H 0.18 -2.35 8.06 -2.91 -0.02 -2.37 16 41 H 0.18 -2.46 6.40 -2.91 -0.02 -2.48 16 42 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 43 H 0.10 -0.21 6.29 -2.38 -0.02 -0.23 16 44 H 0.14 -0.44 6.63 -2.91 -0.02 -0.46 16 45 H 0.14 -0.49 8.06 -2.91 -0.02 -0.51 16 46 H 0.14 -0.19 6.30 -2.91 -0.02 -0.21 16 Total: 0.00 -24.03 382.33 1.46 -22.57 By element: Atomic # 1 Polarization: -17.33 SS G_CDS: -0.19 Total: -17.51 kcal Atomic # 6 Polarization: 3.56 SS G_CDS: 4.05 Total: 7.61 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -2.31 Total: -0.85 kcal Atomic # 8 Polarization: -13.14 SS G_CDS: -2.74 Total: -15.89 kcal Atomic # 9 Polarization: 0.30 SS G_CDS: 0.62 Total: 0.92 kcal Atomic # 14 Polarization: 1.12 SS G_CDS: 2.03 Total: 3.15 kcal Total: -24.03 1.46 -22.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_12496548.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.036 kcal (2) G-P(sol) polarization free energy of solvation -24.029 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.066 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.456 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.574 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.610 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds