Wall clock time and date at job start Sat Mar 6 2021 14:39:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35905 * 116.99760 * 2 1 4 4 C 1.38703 * 120.05599 * 359.97438 * 3 2 1 5 5 C 1.38171 * 119.94423 * 180.02562 * 4 3 2 6 6 C 1.38239 * 120.05144 * 359.97438 * 5 4 3 7 7 C 1.38288 * 120.11786 * 359.97438 * 6 5 4 8 8 C 1.50697 * 119.97562 * 180.02562 * 7 6 5 9 9 H 1.08998 * 112.84711 * 191.20149 * 8 7 6 10 10 C 1.54049 * 113.61758 * 322.50537 * 8 7 6 11 11 C 1.53783 * 86.98480 * 139.98162 * 10 8 7 12 12 H 1.09001 * 113.61092 * 219.98126 * 11 10 8 13 13 N 1.46494 * 113.61594 * 89.16275 * 11 10 8 14 14 C 1.34775 * 120.00347 * 105.86488 * 13 11 10 15 15 O 1.21579 * 119.99868 * 359.97438 * 14 13 11 16 16 C 1.47668 * 120.00483 * 180.02562 * 14 13 11 17 17 C 1.40007 * 120.44694 * 5.95764 * 16 14 13 18 18 N 1.31309 * 121.36853 * 180.02562 * 17 16 14 19 19 C 1.32818 * 121.89674 * 359.97438 * 18 17 16 20 20 N 1.37152 * 132.96397 * 180.02562 * 19 18 17 21 21 C 1.36949 * 110.11055 * 179.71937 * 20 19 18 22 22 C 1.34180 * 109.95394 * 0.44490 * 21 20 19 23 23 C 1.50694 * 126.59982 * 179.83516 * 22 21 20 24 24 O 1.42901 * 109.47434 * 104.69273 * 23 22 21 25 25 Si 1.86306 * 109.47205 * 344.68765 * 23 22 21 26 26 C 1.41021 * 120.08222 * 0.02562 * 19 18 17 27 27 C 1.39286 * 119.61442 * 359.97438 * 26 19 18 28 28 C 1.50702 * 121.02534 * 180.02562 * 27 26 19 29 29 C 1.53780 * 113.61540 * 60.00096 * 8 7 6 30 30 C 1.38122 * 120.04868 * 0.28110 * 7 6 5 31 31 H 1.08994 * 109.47053 * 180.02562 * 1 2 3 32 32 H 1.08999 * 109.47019 * 300.00445 * 1 2 3 33 33 H 1.08996 * 109.46903 * 60.00198 * 1 2 3 34 34 H 1.08004 * 120.03070 * 0.04735 * 4 3 2 35 35 H 1.07998 * 119.97063 * 179.97438 * 5 4 3 36 36 H 1.08002 * 119.94219 * 180.02562 * 6 5 4 37 37 H 1.08999 * 113.61520 * 25.47544 * 10 8 7 38 38 H 1.09002 * 113.69784 * 254.49714 * 10 8 7 39 39 H 0.97003 * 119.99913 * 285.86085 * 13 11 10 40 40 H 1.07992 * 119.31851 * 0.05102 * 17 16 14 41 41 H 0.96997 * 124.94983 * 359.97438 * 20 19 18 42 42 H 1.08007 * 125.02486 * 180.28139 * 21 20 19 43 43 H 1.09007 * 109.47343 * 224.69231 * 23 22 21 44 44 H 0.96701 * 113.99239 * 299.99473 * 24 23 22 45 45 H 1.48498 * 109.99630 * 58.68286 * 25 23 22 46 46 H 1.48502 * 109.99994 * 179.97438 * 25 23 22 47 47 H 1.08998 * 109.47290 * 96.29402 * 28 27 26 48 48 H 1.09007 * 109.46980 * 216.28538 * 28 27 26 49 49 H 1.08994 * 109.47746 * 336.28886 * 28 27 26 50 50 H 1.08996 * 113.61376 * 105.47186 * 29 8 7 51 51 H 1.08994 * 113.61393 * 334.56510 * 29 8 7 52 52 H 1.08000 * 120.02619 * 179.72240 * 30 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2916 2.3749 -0.0005 5 6 1.9213 3.6048 -0.0011 6 6 3.3018 3.6758 -0.0005 7 6 4.0562 2.5168 0.0011 8 6 5.5610 2.5979 0.0022 9 1 6.0368 1.6366 -0.1917 10 6 6.1177 3.7486 -0.8574 11 6 7.1514 3.9740 0.2586 12 1 7.3480 5.0259 0.4657 13 7 8.3766 3.1885 0.0911 14 6 9.5139 3.7909 -0.3090 15 8 9.5229 4.9862 -0.5315 16 6 10.7488 2.9991 -0.4784 17 6 10.7216 1.6055 -0.3473 18 7 11.8088 0.8838 -0.4937 19 6 12.9846 1.4348 -0.7728 20 7 14.2378 0.9137 -0.9702 21 6 15.1282 1.9184 -1.2410 22 6 14.5008 3.1043 -1.2200 23 6 15.1236 4.4547 -1.4640 24 8 14.7616 4.9180 -2.7664 25 14 16.9777 4.3135 -1.3481 26 6 13.0928 2.8331 -0.9201 27 6 11.9604 3.6305 -0.7718 28 6 12.0396 5.1279 -0.9230 29 6 6.1372 3.3355 1.2223 30 6 3.4315 1.2849 -0.0037 31 1 -0.3633 -1.0276 0.0005 32 1 -0.3633 0.5139 0.8899 33 1 -0.3633 0.5138 -0.8900 34 1 0.2130 2.3200 -0.0002 35 1 1.3343 4.5114 -0.0019 36 1 3.7922 4.6381 -0.0005 37 1 5.4211 4.5777 -0.9813 38 1 6.5568 3.4191 -1.7992 39 1 8.3694 2.2349 0.2683 40 1 9.7870 1.1138 -0.1214 41 1 14.4603 -0.0294 -0.9281 42 1 16.1805 1.7773 -1.4394 43 1 14.7655 5.1607 -0.7147 44 1 15.0490 4.3373 -3.4843 45 1 17.4753 3.3301 -2.3432 46 1 17.6038 5.6387 -1.5874 47 1 11.7536 5.4062 -1.9373 48 1 11.3624 5.6012 -0.2119 49 1 13.0596 5.4593 -0.7292 50 1 6.5920 2.6728 1.9585 51 1 5.4459 4.0519 1.6660 52 1 4.0210 0.3800 -0.0070 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_12890568.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:39:12 Heat of formation + Delta-G solvation = 31.860708 kcal Electronic energy + Delta-G solvation = -35525.696784 eV Core-core repulsion = 30844.919842 eV Total energy + Delta-G solvation = -4680.776941 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.173 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -42.86180 -41.66487 -40.94156 -39.87690 -38.71089 -37.93324 -37.74811 -35.19637 -34.54056 -32.24030 -31.90747 -31.25789 -30.54923 -28.93595 -28.23377 -26.67210 -26.61311 -25.98114 -24.67826 -23.97287 -23.55586 -22.35485 -21.96550 -20.68611 -20.27562 -19.39139 -18.80826 -18.63030 -17.71620 -17.51057 -17.23356 -17.08587 -16.88214 -16.67018 -16.64060 -16.57630 -16.03154 -15.81025 -15.67492 -15.50136 -15.34835 -14.99272 -14.70286 -14.43619 -14.38022 -14.12523 -14.00779 -13.96005 -13.72092 -13.63175 -13.43858 -13.33607 -13.20382 -13.19618 -13.03009 -12.66245 -12.46556 -12.26307 -12.08806 -11.79195 -11.62211 -11.56114 -11.28839 -11.22555 -11.14677 -10.56568 -10.26603 -10.11364 -9.73501 -9.62100 -9.14751 -9.12533 -4.83643 -0.34677 -0.08038 0.33844 0.48854 1.35614 1.41626 1.62764 1.68533 1.78917 2.03331 2.05459 2.35798 2.74119 2.76016 3.30622 3.44381 3.49419 3.56424 3.62495 3.69478 3.71271 3.73784 3.79312 3.88929 3.98948 4.10757 4.13854 4.20053 4.26526 4.28507 4.30081 4.34689 4.38281 4.40197 4.55785 4.60721 4.64227 4.69437 4.70925 4.72283 4.80715 4.81791 4.88965 4.97706 5.02371 5.05558 5.12077 5.15078 5.21886 5.25688 5.35265 5.39579 5.50312 5.57289 5.72582 5.73594 5.83689 6.21881 6.44336 6.47462 6.59585 6.83007 7.17050 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.222 4.222 5 C -0.084 4.084 6 C -0.160 4.160 7 C -0.033 4.033 8 C -0.069 4.069 9 H 0.110 0.890 10 C -0.141 4.141 11 C 0.119 3.881 12 H 0.091 0.909 13 N -0.696 5.696 14 C 0.573 3.427 15 O -0.564 6.564 16 C -0.241 4.241 17 C 0.180 3.820 18 N -0.516 5.516 19 C 0.288 3.712 20 N -0.560 5.560 21 C 0.090 3.910 22 C -0.196 4.196 23 C -0.059 4.059 24 O -0.550 6.550 25 Si 0.780 3.220 26 C -0.165 4.165 27 C 0.063 3.937 28 C -0.112 4.112 29 C -0.122 4.122 30 C -0.165 4.165 31 H 0.115 0.885 32 H 0.063 0.937 33 H 0.062 0.938 34 H 0.139 0.861 35 H 0.143 0.857 36 H 0.140 0.860 37 H 0.100 0.900 38 H 0.066 0.934 39 H 0.413 0.587 40 H 0.193 0.807 41 H 0.438 0.562 42 H 0.220 0.780 43 H 0.111 0.889 44 H 0.384 0.616 45 H -0.259 1.259 46 H -0.308 1.308 47 H 0.069 0.931 48 H 0.084 0.916 49 H 0.075 0.925 50 H 0.089 0.911 51 H 0.104 0.896 52 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.456 -4.444 2.722 5.411 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.241 4.241 5 C -0.102 4.102 6 C -0.178 4.178 7 C -0.033 4.033 8 C -0.087 4.087 9 H 0.128 0.872 10 C -0.179 4.179 11 C 0.014 3.986 12 H 0.109 0.891 13 N -0.348 5.348 14 C 0.362 3.638 15 O -0.444 6.444 16 C -0.248 4.248 17 C 0.012 3.988 18 N -0.229 5.229 19 C 0.055 3.945 20 N -0.166 5.166 21 C -0.037 4.037 22 C -0.204 4.204 23 C -0.167 4.167 24 O -0.358 6.358 25 Si 0.682 3.318 26 C -0.172 4.172 27 C 0.054 3.946 28 C -0.168 4.168 29 C -0.160 4.160 30 C -0.184 4.184 31 H 0.133 0.867 32 H 0.082 0.918 33 H 0.081 0.919 34 H 0.157 0.843 35 H 0.160 0.840 36 H 0.157 0.843 37 H 0.118 0.882 38 H 0.085 0.915 39 H 0.251 0.749 40 H 0.210 0.790 41 H 0.280 0.720 42 H 0.237 0.763 43 H 0.129 0.871 44 H 0.233 0.767 45 H -0.185 1.185 46 H -0.236 1.236 47 H 0.088 0.912 48 H 0.102 0.898 49 H 0.094 0.906 50 H 0.108 0.892 51 H 0.122 0.878 52 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 2.126 -4.289 2.579 5.438 hybrid contribution -1.065 0.024 -1.285 1.669 sum 1.062 -4.265 1.294 4.582 Atomic orbital electron populations 1.23287 0.76688 1.05358 1.02091 1.86041 1.23254 1.27331 1.88810 1.19294 0.92860 0.84619 0.96831 1.21481 1.00899 0.92443 1.09285 1.21239 0.95026 0.97521 0.96432 1.21178 0.93789 0.98805 1.04050 1.19625 0.95575 0.91826 0.96314 1.21681 0.89856 0.99561 0.97598 0.87207 1.23605 0.97896 0.98758 0.97681 1.21842 0.83098 0.96454 0.97230 0.89059 1.45447 1.08264 1.12661 1.68460 1.17976 0.83236 0.86521 0.76067 1.90745 1.85306 1.16243 1.52105 1.20490 0.94151 0.95580 1.14597 1.22950 0.95886 0.88665 0.91307 1.66509 0.97219 1.40727 1.18478 1.18775 0.87416 0.89413 0.98923 1.41602 1.03976 1.11038 1.60005 1.22328 0.96548 0.85204 0.99600 1.20712 0.91204 0.96158 1.12303 1.24808 1.12451 0.92854 0.86619 1.86607 1.81068 1.52320 1.15760 0.94126 0.70192 0.78550 0.88887 1.19734 0.95114 0.93184 1.09140 1.20063 0.90161 0.96915 0.87430 1.21001 1.03123 0.89651 1.03014 1.23362 0.96817 0.99869 0.95946 1.20511 0.91442 0.98894 1.07551 0.86694 0.91825 0.91936 0.84332 0.83965 0.84266 0.88190 0.91544 0.74927 0.79030 0.72045 0.76332 0.87090 0.76655 1.18465 1.23612 0.91233 0.89785 0.90602 0.89243 0.87780 0.85011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.08 16 2 O -0.34 -1.95 10.50 -92.48 -0.97 -2.92 16 3 C 0.11 0.60 6.69 22.50 0.15 0.75 16 4 C -0.22 -0.60 9.04 22.36 0.20 -0.40 16 5 C -0.08 -0.08 10.04 22.25 0.22 0.14 16 6 C -0.16 -0.07 8.61 22.28 0.19 0.12 16 7 C -0.03 -0.03 5.29 -19.88 -0.11 -0.14 16 8 C -0.07 0.21 3.87 -10.92 -0.04 0.17 16 9 H 0.11 -0.57 8.09 -2.39 -0.02 -0.59 16 10 C -0.14 0.19 7.27 31.21 0.23 0.42 16 11 C 0.12 -0.11 4.29 45.52 0.20 0.08 16 12 H 0.09 0.26 7.50 -2.39 -0.02 0.24 16 13 N -0.70 0.58 5.22 -443.08 -2.31 -1.73 16 14 C 0.57 3.56 7.72 86.73 0.67 4.23 16 15 O -0.56 -7.42 13.11 -3.96 -0.05 -7.47 16 16 C -0.24 -1.36 5.89 -19.99 -0.12 -1.48 16 17 C 0.18 0.36 10.67 85.20 0.91 1.27 16 18 N -0.52 -2.52 10.37 -191.75 -1.99 -4.51 16 19 C 0.29 1.21 8.42 134.03 1.13 2.34 16 20 N -0.56 1.78 6.04 -192.25 -1.16 0.61 16 21 C 0.09 -0.50 10.44 82.97 0.87 0.37 16 22 C -0.20 0.00 5.57 -18.64 -0.10 -0.11 16 23 C -0.06 0.04 2.06 71.23 0.15 0.18 16 24 O -0.55 -1.67 12.88 -148.98 -1.92 -3.59 16 25 Si 0.78 -3.99 30.84 68.60 2.12 -1.87 16 26 C -0.16 -0.93 6.16 -20.19 -0.12 -1.05 16 27 C 0.06 0.50 5.98 -19.25 -0.12 0.38 16 28 C -0.11 -0.98 8.69 71.24 0.62 -0.36 16 29 C -0.12 0.54 7.29 31.12 0.23 0.77 16 30 C -0.17 -0.65 9.65 22.36 0.22 -0.44 16 31 H 0.11 -0.59 8.14 -2.39 -0.02 -0.61 16 32 H 0.06 -0.22 7.66 -2.39 -0.02 -0.24 16 33 H 0.06 -0.21 7.66 -2.39 -0.02 -0.22 16 34 H 0.14 -0.12 6.30 -2.91 -0.02 -0.14 16 35 H 0.14 -0.46 8.06 -2.91 -0.02 -0.48 16 36 H 0.14 -0.42 6.66 -2.91 -0.02 -0.44 16 37 H 0.10 -0.19 6.31 -2.39 -0.02 -0.21 16 38 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 39 H 0.41 -2.73 6.78 -92.71 -0.63 -3.36 16 40 H 0.19 -1.17 6.43 -2.91 -0.02 -1.19 16 41 H 0.44 -3.78 8.96 -92.71 -0.83 -4.61 16 42 H 0.22 -2.95 6.29 -2.91 -0.02 -2.97 16 43 H 0.11 0.03 6.05 -2.38 -0.01 0.01 16 44 H 0.38 -1.25 8.70 -74.06 -0.64 -1.89 16 45 H -0.26 1.24 6.99 99.48 0.70 1.93 16 46 H -0.31 -1.25 7.11 99.48 0.71 -0.55 16 47 H 0.07 0.78 8.14 -2.39 -0.02 0.76 16 48 H 0.08 0.93 5.95 -2.38 -0.01 0.92 16 49 H 0.08 0.49 5.05 -2.39 -0.01 0.48 16 50 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 51 H 0.10 -0.49 7.72 -2.39 -0.02 -0.51 16 52 H 0.13 0.29 8.05 -2.91 -0.02 0.27 16 Total: 0.00 -26.20 417.28 -0.86 -27.06 By element: Atomic # 1 Polarization: -12.86 SS G_CDS: -1.05 Total: -13.91 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: 6.48 Total: 8.33 kcal Atomic # 7 Polarization: -0.17 SS G_CDS: -5.46 Total: -5.63 kcal Atomic # 8 Polarization: -11.04 SS G_CDS: -2.94 Total: -13.98 kcal Atomic # 14 Polarization: -3.99 SS G_CDS: 2.12 Total: -1.87 kcal Total: -26.20 -0.86 -27.06 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_12890568.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.916 kcal (2) G-P(sol) polarization free energy of solvation -26.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.858 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.056 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.861 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds