Wall clock time and date at job start Sat Mar 6 2021 14:39:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35896 * 116.99643 * 2 1 4 4 C 1.38708 * 120.05812 * 180.27250 * 3 2 1 5 5 C 1.38163 * 119.94855 * 180.31607 * 4 3 2 6 6 C 1.50698 * 119.97740 * 179.70411 * 5 4 3 7 7 H 1.09003 * 112.84636 * 10.92765 * 6 5 4 8 8 C 1.53781 * 113.61565 * 142.23169 * 6 5 4 9 9 C 1.54049 * 87.08031 * 139.97986 * 8 6 5 10 10 H 1.08992 * 113.69868 * 220.05225 * 9 8 6 11 11 N 1.46506 * 113.61276 * 89.07129 * 9 8 6 12 12 C 1.34772 * 120.00033 * 107.61836 * 11 9 8 13 13 O 1.21584 * 119.99624 * 0.02562 * 12 11 9 14 14 C 1.47655 * 120.00153 * 180.02562 * 12 11 9 15 15 C 1.40162 * 119.97103 * 0.02562 * 14 12 11 16 16 C 1.36354 * 120.66284 * 179.97438 * 15 14 12 17 17 C 1.39322 * 120.24288 * 359.97438 * 16 15 14 18 18 N 1.37397 * 133.25518 * 179.97438 * 17 16 15 19 19 C 1.36861 * 109.98504 * 180.02562 * 18 17 16 20 20 C 1.34187 * 109.96769 * 359.97438 * 19 18 17 21 21 C 1.50700 * 126.54587 * 180.02562 * 20 19 18 22 22 O 1.42898 * 109.46973 * 104.95622 * 21 20 19 23 23 Si 1.86304 * 109.46855 * 344.95935 * 21 20 19 24 24 C 1.40912 * 119.64156 * 0.02597 * 17 16 15 25 25 C 1.39185 * 119.96921 * 179.72936 * 14 12 11 26 26 C 1.53781 * 113.61793 * 239.73084 * 6 5 4 27 27 C 1.38247 * 120.05199 * 359.43710 * 5 4 3 28 28 C 1.38283 * 120.11332 * 0.24715 * 27 5 4 29 29 C 1.38130 * 120.05276 * 0.04836 * 28 27 5 30 30 H 1.09006 * 109.46743 * 179.97438 * 1 2 3 31 31 H 1.08993 * 109.47280 * 299.99201 * 1 2 3 32 32 H 1.08997 * 109.47658 * 60.00128 * 1 2 3 33 33 H 1.08000 * 120.02641 * 0.02677 * 4 3 2 34 34 H 1.09005 * 113.61471 * 254.53569 * 8 6 5 35 35 H 1.08996 * 113.61178 * 25.34912 * 8 6 5 36 36 H 0.97002 * 119.99888 * 287.62233 * 11 9 8 37 37 H 1.08001 * 119.66731 * 0.02562 * 15 14 12 38 38 H 1.08004 * 119.87865 * 180.02562 * 16 15 14 39 39 H 0.97007 * 125.00856 * 359.97438 * 18 17 16 40 40 H 1.07999 * 125.01974 * 179.97438 * 19 18 17 41 41 H 1.08992 * 109.47506 * 224.96110 * 21 20 19 42 42 H 0.96698 * 114.00346 * 300.00155 * 22 21 20 43 43 H 1.48508 * 109.99854 * 58.67702 * 23 21 20 44 44 H 1.48503 * 110.00029 * 179.97438 * 23 21 20 45 45 H 1.08003 * 120.30691 * 0.02562 * 25 14 12 46 46 H 1.09002 * 113.61445 * 334.56799 * 26 6 5 47 47 H 1.09002 * 113.61408 * 105.38530 * 26 6 5 48 48 H 1.08003 * 119.94523 * 180.26647 * 27 5 4 49 49 H 1.08001 * 119.97333 * 180.02562 * 28 27 5 50 50 H 1.08002 * 120.02490 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4310 1.2850 -0.0057 5 6 4.0558 2.5172 0.0009 6 6 5.5606 2.5984 0.0015 7 1 6.0364 1.6374 -0.1941 8 6 6.1158 3.7484 -0.8554 9 6 7.1528 3.9747 0.2611 10 1 7.3490 5.0262 0.4702 11 7 8.3776 3.1887 0.0925 12 6 9.5230 3.7964 -0.2754 13 8 9.5398 4.9969 -0.4669 14 6 10.7573 3.0041 -0.4460 15 6 10.7370 1.6201 -0.2256 16 6 11.8684 0.8748 -0.3795 17 6 13.0629 1.4828 -0.7597 18 7 14.3312 1.0061 -0.9877 19 6 15.1601 2.0345 -1.3460 20 6 14.4766 3.1891 -1.3638 21 6 15.0236 4.5506 -1.7076 22 8 14.5839 4.9243 -3.0148 23 14 16.8855 4.4993 -1.6696 24 6 13.0964 2.8736 -0.9843 25 6 11.9384 3.6315 -0.8314 26 6 6.1375 3.3343 1.2223 27 6 3.3017 3.6759 0.0015 28 6 1.9207 3.6048 0.0005 29 6 1.2913 2.3752 0.0001 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5137 0.8900 32 1 -0.3634 0.5138 -0.8899 33 1 4.0206 0.3801 -0.0106 34 1 6.5535 3.4189 -1.7978 35 1 5.4181 4.5766 -0.9795 36 1 8.3642 2.2309 0.2455 37 1 9.8158 1.1390 0.0683 38 1 11.8383 -0.1909 -0.2067 39 1 14.5997 0.0775 -0.9061 40 1 16.2095 1.9320 -1.5798 41 1 14.6654 5.2801 -0.9813 42 1 14.8669 4.3184 -3.7133 43 1 17.3854 3.4855 -2.6328 44 1 17.4374 5.8359 -2.0076 45 1 11.9575 4.6971 -1.0065 46 1 5.4463 4.0500 1.6675 47 1 6.5913 2.6704 1.9581 48 1 3.7919 4.6382 0.0023 49 1 1.3337 4.5114 0.0006 50 1 0.2127 2.3203 -0.0002 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_13287722.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:39:38 Heat of formation + Delta-G solvation = 14.517615 kcal Electronic energy + Delta-G solvation = -32723.363847 eV Core-core repulsion = 28262.798383 eV Total energy + Delta-G solvation = -4460.565464 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -42.49534 -41.60635 -40.79373 -39.65015 -38.03916 -37.80202 -37.33773 -34.42529 -33.27804 -32.13657 -31.13664 -30.68778 -30.27120 -28.28741 -26.70888 -26.49831 -26.24545 -24.60326 -23.54200 -23.48188 -22.31588 -21.61578 -20.79870 -20.23371 -19.37050 -18.75661 -18.35989 -17.52082 -17.32193 -17.20499 -16.97950 -16.80028 -16.65640 -16.22381 -16.02468 -15.85872 -15.62593 -15.60085 -15.14173 -15.09639 -14.76661 -14.70244 -14.43767 -14.30449 -14.14844 -13.96987 -13.73956 -13.53615 -13.50942 -13.27318 -13.19980 -12.68911 -12.56625 -12.44441 -12.30900 -12.10940 -12.09198 -11.77171 -11.64600 -11.57204 -11.24555 -10.80816 -10.79149 -10.45595 -9.99814 -9.70129 -9.32705 -9.09621 -8.83641 -4.95654 -0.04501 0.18946 0.37171 0.54123 1.30513 1.46957 1.56020 1.94764 1.99106 2.02012 2.16616 2.33422 2.78290 2.97272 3.45346 3.50495 3.57849 3.69272 3.70565 3.75063 3.79991 3.85469 3.87499 3.95549 4.05145 4.08582 4.16850 4.20394 4.21744 4.36270 4.38032 4.42606 4.49884 4.52940 4.58545 4.58770 4.63918 4.69289 4.74572 4.80552 4.87626 4.95526 5.02511 5.03325 5.12165 5.14915 5.25586 5.37930 5.38664 5.49517 5.52959 5.60279 5.62370 5.73739 5.83330 5.98112 6.34802 6.46917 6.53257 6.58261 7.35277 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.149 4.149 5 C -0.031 4.031 6 C -0.075 4.075 7 H 0.098 0.902 8 C -0.143 4.143 9 C 0.121 3.879 10 H 0.107 0.893 11 N -0.712 5.712 12 C 0.568 3.432 13 O -0.535 6.535 14 C -0.169 4.169 15 C -0.066 4.066 16 C -0.134 4.134 17 C 0.119 3.881 18 N -0.585 5.585 19 C 0.058 3.942 20 C -0.187 4.187 21 C -0.042 4.042 22 O -0.528 6.528 23 Si 0.687 3.313 24 C -0.102 4.102 25 C 0.009 3.991 26 C -0.134 4.134 27 C -0.154 4.154 28 C -0.076 4.076 29 C -0.213 4.213 30 H 0.101 0.899 31 H 0.056 0.944 32 H 0.056 0.944 33 H 0.129 0.871 34 H 0.075 0.925 35 H 0.097 0.903 36 H 0.400 0.600 37 H 0.128 0.872 38 H 0.128 0.872 39 H 0.421 0.579 40 H 0.176 0.824 41 H 0.116 0.884 42 H 0.373 0.627 43 H -0.260 1.260 44 H -0.255 1.255 45 H 0.139 0.861 46 H 0.100 0.900 47 H 0.077 0.923 48 H 0.126 0.874 49 H 0.125 0.875 50 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.903 -5.837 2.552 6.435 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.168 4.168 5 C -0.032 4.032 6 C -0.093 4.093 7 H 0.116 0.884 8 C -0.182 4.182 9 C 0.015 3.985 10 H 0.125 0.875 11 N -0.363 5.363 12 C 0.356 3.644 13 O -0.412 6.412 14 C -0.173 4.173 15 C -0.086 4.086 16 C -0.154 4.154 17 C 0.010 3.990 18 N -0.187 5.187 19 C -0.068 4.068 20 C -0.195 4.195 21 C -0.153 4.153 22 O -0.334 6.334 23 Si 0.587 3.413 24 C -0.107 4.107 25 C -0.011 4.011 26 C -0.172 4.172 27 C -0.172 4.172 28 C -0.095 4.095 29 C -0.232 4.232 30 H 0.119 0.881 31 H 0.075 0.925 32 H 0.074 0.926 33 H 0.147 0.853 34 H 0.094 0.906 35 H 0.115 0.885 36 H 0.235 0.765 37 H 0.146 0.854 38 H 0.146 0.854 39 H 0.259 0.741 40 H 0.193 0.807 41 H 0.134 0.866 42 H 0.220 0.780 43 H -0.185 1.185 44 H -0.180 1.180 45 H 0.157 0.843 46 H 0.118 0.882 47 H 0.096 0.904 48 H 0.144 0.856 49 H 0.143 0.857 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 1.541 -4.672 2.294 5.428 hybrid contribution -0.842 -1.284 -0.990 1.827 sum 0.699 -5.957 1.304 6.138 Atomic orbital electron populations 1.23081 0.78118 1.04165 1.01442 1.86075 1.21600 1.26934 1.88616 1.19032 0.92329 0.84235 0.96052 1.20296 0.91298 0.98196 1.06986 1.19454 0.94740 0.92145 0.96819 1.21614 0.90810 0.99209 0.97646 0.88361 1.23621 0.98006 0.98340 0.98212 1.21886 0.83194 0.97134 0.96278 0.87468 1.45557 1.08560 1.11499 1.70719 1.18173 0.82979 0.87177 0.76048 1.90801 1.85558 1.14570 1.50309 1.19527 0.93994 0.93726 1.10055 1.20583 0.97671 0.92431 0.97919 1.19661 0.90018 1.00017 1.05737 1.18440 0.86234 0.93358 1.00966 1.41737 1.07153 1.10217 1.59589 1.21751 0.96378 0.86581 1.02105 1.20699 0.92645 0.95342 1.10791 1.24367 1.10484 0.93851 0.86568 1.86642 1.77375 1.53509 1.15871 0.95202 0.74255 0.81323 0.90480 1.18917 0.93696 0.91989 1.06081 1.20705 0.89030 1.00260 0.91082 1.23423 0.97638 0.99982 0.96184 1.20934 0.93627 0.98204 1.04458 1.20949 0.94595 0.97050 0.96860 1.21268 1.00137 0.92474 1.09289 0.88072 0.92545 0.92559 0.85336 0.90614 0.88490 0.76460 0.85435 0.85446 0.74125 0.80711 0.86575 0.77961 1.18503 1.17992 0.84304 0.88202 0.90413 0.85643 0.85662 0.85528 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.80 10.50 -19.41 -0.20 -1.01 16 3 C 0.13 0.32 6.69 -39.22 -0.26 0.06 16 4 C -0.15 -0.27 9.65 -39.43 -0.38 -0.65 16 5 C -0.03 -0.02 5.29 -104.65 -0.55 -0.58 16 6 C -0.07 0.07 3.86 -90.96 -0.35 -0.28 16 7 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 8 C -0.14 0.04 7.26 -25.78 -0.19 -0.15 16 9 C 0.12 0.02 4.34 -66.97 -0.29 -0.27 16 10 H 0.11 0.19 7.46 -51.93 -0.39 -0.19 16 11 N -0.71 -0.15 5.21 -53.88 -0.28 -0.44 16 12 C 0.57 1.94 7.76 -12.42 -0.10 1.85 16 13 O -0.54 -3.92 15.93 5.29 0.08 -3.83 16 14 C -0.17 -0.38 5.87 -104.98 -0.62 -1.00 16 15 C -0.07 0.03 9.46 -39.54 -0.37 -0.35 16 16 C -0.13 0.09 10.00 -39.86 -0.40 -0.31 16 17 C 0.12 0.06 7.27 -83.96 -0.61 -0.55 16 18 N -0.58 1.13 6.05 -10.61 -0.06 1.07 16 19 C 0.06 -0.10 10.43 -16.73 -0.17 -0.27 16 20 C -0.19 -0.10 5.58 -102.69 -0.57 -0.68 16 21 C -0.04 -0.02 3.06 36.01 0.11 0.09 16 22 O -0.53 -1.18 12.88 -35.23 -0.45 -1.64 16 23 Si 0.69 -0.97 30.82 -169.99 -5.24 -6.21 16 24 C -0.10 -0.23 6.34 -105.15 -0.67 -0.89 16 25 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 26 C -0.13 0.19 7.28 -25.92 -0.19 0.00 16 27 C -0.15 -0.09 8.61 -39.56 -0.34 -0.43 16 28 C -0.08 -0.06 10.04 -39.60 -0.40 -0.46 16 29 C -0.21 -0.29 9.04 -39.43 -0.36 -0.64 16 30 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 31 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 32 H 0.06 -0.10 7.66 -51.93 -0.40 -0.49 16 33 H 0.13 0.11 8.05 -52.49 -0.42 -0.31 16 34 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 35 H 0.10 -0.06 6.31 -51.93 -0.33 -0.38 16 36 H 0.40 -0.96 6.70 -40.82 -0.27 -1.23 16 37 H 0.13 -0.42 6.36 -52.49 -0.33 -0.76 16 38 H 0.13 -0.40 8.06 -52.48 -0.42 -0.82 16 39 H 0.42 -2.08 8.96 -40.82 -0.37 -2.45 16 40 H 0.18 -0.77 6.27 -52.49 -0.33 -1.10 16 41 H 0.12 0.05 7.96 -51.93 -0.41 -0.36 16 42 H 0.37 -0.34 8.70 45.56 0.40 0.06 16 43 H -0.26 0.09 7.00 56.52 0.40 0.49 16 44 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 45 H 0.14 0.62 7.64 -52.48 -0.40 0.21 16 46 H 0.10 -0.15 7.72 -51.93 -0.40 -0.55 16 47 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 48 H 0.13 -0.11 6.65 -52.48 -0.35 -0.46 16 49 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 50 H 0.13 -0.05 6.30 -52.49 -0.33 -0.38 16 LS Contribution 411.84 15.07 6.21 6.21 Total: 0.00 -10.43 411.84 -12.52 -22.95 By element: Atomic # 1 Polarization: -5.72 SS G_CDS: -6.47 Total: -12.20 kcal Atomic # 6 Polarization: 1.19 SS G_CDS: -6.09 Total: -4.90 kcal Atomic # 7 Polarization: 0.98 SS G_CDS: -0.35 Total: 0.63 kcal Atomic # 8 Polarization: -5.90 SS G_CDS: -0.57 Total: -6.48 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.24 Total: -6.21 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -10.43 -12.52 -22.95 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13287722.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.463 kcal (2) G-P(sol) polarization free energy of solvation -10.430 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.515 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.945 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.518 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds