Wall clock time and date at job start Sat Mar 6 2021 14:39:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35896 * 116.99643 * 2 1 4 4 C 1.38708 * 120.05812 * 180.27250 * 3 2 1 5 5 C 1.38163 * 119.94855 * 180.31607 * 4 3 2 6 6 C 1.50698 * 119.97740 * 179.70411 * 5 4 3 7 7 H 1.09003 * 112.84636 * 10.92765 * 6 5 4 8 8 C 1.53781 * 113.61565 * 142.23169 * 6 5 4 9 9 C 1.54049 * 87.08031 * 139.97986 * 8 6 5 10 10 H 1.08992 * 113.69868 * 220.05225 * 9 8 6 11 11 N 1.46506 * 113.61276 * 89.07129 * 9 8 6 12 12 C 1.34772 * 120.00033 * 107.61836 * 11 9 8 13 13 O 1.21584 * 119.99624 * 0.02562 * 12 11 9 14 14 C 1.47655 * 120.00153 * 180.02562 * 12 11 9 15 15 C 1.40162 * 119.97103 * 0.02562 * 14 12 11 16 16 C 1.36354 * 120.66284 * 179.97438 * 15 14 12 17 17 C 1.39322 * 120.24288 * 359.97438 * 16 15 14 18 18 N 1.37397 * 133.25518 * 179.97438 * 17 16 15 19 19 C 1.36861 * 109.98504 * 180.02562 * 18 17 16 20 20 C 1.34187 * 109.96769 * 359.97438 * 19 18 17 21 21 C 1.50700 * 126.54587 * 180.02562 * 20 19 18 22 22 O 1.42898 * 109.46973 * 104.95622 * 21 20 19 23 23 Si 1.86304 * 109.46855 * 344.95935 * 21 20 19 24 24 C 1.40912 * 119.64156 * 0.02597 * 17 16 15 25 25 C 1.39185 * 119.96921 * 179.72936 * 14 12 11 26 26 C 1.53781 * 113.61793 * 239.73084 * 6 5 4 27 27 C 1.38247 * 120.05199 * 359.43710 * 5 4 3 28 28 C 1.38283 * 120.11332 * 0.24715 * 27 5 4 29 29 C 1.38130 * 120.05276 * 0.04836 * 28 27 5 30 30 H 1.09006 * 109.46743 * 179.97438 * 1 2 3 31 31 H 1.08993 * 109.47280 * 299.99201 * 1 2 3 32 32 H 1.08997 * 109.47658 * 60.00128 * 1 2 3 33 33 H 1.08000 * 120.02641 * 0.02677 * 4 3 2 34 34 H 1.09005 * 113.61471 * 254.53569 * 8 6 5 35 35 H 1.08996 * 113.61178 * 25.34912 * 8 6 5 36 36 H 0.97002 * 119.99888 * 287.62233 * 11 9 8 37 37 H 1.08001 * 119.66731 * 0.02562 * 15 14 12 38 38 H 1.08004 * 119.87865 * 180.02562 * 16 15 14 39 39 H 0.97007 * 125.00856 * 359.97438 * 18 17 16 40 40 H 1.07999 * 125.01974 * 179.97438 * 19 18 17 41 41 H 1.08992 * 109.47506 * 224.96110 * 21 20 19 42 42 H 0.96698 * 114.00346 * 300.00155 * 22 21 20 43 43 H 1.48508 * 109.99854 * 58.67702 * 23 21 20 44 44 H 1.48503 * 110.00029 * 179.97438 * 23 21 20 45 45 H 1.08003 * 120.30691 * 0.02562 * 25 14 12 46 46 H 1.09002 * 113.61445 * 334.56799 * 26 6 5 47 47 H 1.09002 * 113.61408 * 105.38530 * 26 6 5 48 48 H 1.08003 * 119.94523 * 180.26647 * 27 5 4 49 49 H 1.08001 * 119.97333 * 180.02562 * 28 27 5 50 50 H 1.08002 * 120.02490 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4310 1.2850 -0.0057 5 6 4.0558 2.5172 0.0009 6 6 5.5606 2.5984 0.0015 7 1 6.0364 1.6374 -0.1941 8 6 6.1158 3.7484 -0.8554 9 6 7.1528 3.9747 0.2611 10 1 7.3490 5.0262 0.4702 11 7 8.3776 3.1887 0.0925 12 6 9.5230 3.7964 -0.2754 13 8 9.5398 4.9969 -0.4669 14 6 10.7573 3.0041 -0.4460 15 6 10.7370 1.6201 -0.2256 16 6 11.8684 0.8748 -0.3795 17 6 13.0629 1.4828 -0.7597 18 7 14.3312 1.0061 -0.9877 19 6 15.1601 2.0345 -1.3460 20 6 14.4766 3.1891 -1.3638 21 6 15.0236 4.5506 -1.7076 22 8 14.5839 4.9243 -3.0148 23 14 16.8855 4.4993 -1.6696 24 6 13.0964 2.8736 -0.9843 25 6 11.9384 3.6315 -0.8314 26 6 6.1375 3.3343 1.2223 27 6 3.3017 3.6759 0.0015 28 6 1.9207 3.6048 0.0005 29 6 1.2913 2.3752 0.0001 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5137 0.8900 32 1 -0.3634 0.5138 -0.8899 33 1 4.0206 0.3801 -0.0106 34 1 6.5535 3.4189 -1.7978 35 1 5.4181 4.5766 -0.9795 36 1 8.3642 2.2309 0.2455 37 1 9.8158 1.1390 0.0683 38 1 11.8383 -0.1909 -0.2067 39 1 14.5997 0.0775 -0.9061 40 1 16.2095 1.9320 -1.5798 41 1 14.6654 5.2801 -0.9813 42 1 14.8669 4.3184 -3.7133 43 1 17.3854 3.4855 -2.6328 44 1 17.4374 5.8359 -2.0076 45 1 11.9575 4.6971 -1.0065 46 1 5.4463 4.0500 1.6675 47 1 6.5913 2.6704 1.9581 48 1 3.7919 4.6382 0.0023 49 1 1.3337 4.5114 0.0006 50 1 0.2127 2.3203 -0.0002 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_13287722.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:39:36 Heat of formation + Delta-G solvation = 14.901752 kcal Electronic energy + Delta-G solvation = -32723.347190 eV Core-core repulsion = 28262.798383 eV Total energy + Delta-G solvation = -4460.548807 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -42.46673 -41.65772 -40.89655 -39.75010 -38.09065 -37.86988 -37.42164 -34.57823 -33.27962 -32.17503 -31.16879 -30.70397 -30.27930 -28.23591 -26.68327 -26.49796 -26.27769 -24.66485 -23.57081 -23.47293 -22.34680 -21.71861 -20.80607 -20.27262 -19.38030 -18.77632 -18.40825 -17.58872 -17.33697 -17.21888 -17.00595 -16.85989 -16.66846 -16.26937 -16.13750 -15.90162 -15.70417 -15.63834 -15.14348 -15.11180 -14.82633 -14.76832 -14.44639 -14.31958 -14.11903 -13.99048 -13.74965 -13.56892 -13.48519 -13.24884 -13.19924 -12.68460 -12.60438 -12.51029 -12.28971 -12.13901 -12.10276 -11.79202 -11.64787 -11.57478 -11.25969 -11.09578 -10.80395 -10.47764 -10.14768 -9.74383 -9.32865 -9.15302 -8.81209 -4.86397 -0.15427 0.20778 0.32899 0.48011 1.35751 1.51917 1.61861 1.82673 2.01717 2.06087 2.12841 2.35344 2.73810 2.88403 3.46670 3.52461 3.61765 3.68718 3.71446 3.76917 3.84607 3.87929 3.91335 3.97008 4.09216 4.14851 4.19030 4.28184 4.34886 4.37584 4.39138 4.46661 4.53043 4.55434 4.60696 4.63224 4.67664 4.71185 4.78685 4.80132 4.87321 4.97551 5.01487 5.02351 5.10553 5.15568 5.27408 5.34230 5.35207 5.46813 5.49925 5.56022 5.58214 5.71165 5.82450 5.98805 6.43832 6.50036 6.55974 6.62067 7.18160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.339 6.339 3 C 0.110 3.890 4 C -0.164 4.164 5 C -0.034 4.034 6 C -0.066 4.066 7 H 0.112 0.888 8 C -0.142 4.142 9 C 0.114 3.886 10 H 0.086 0.914 11 N -0.694 5.694 12 C 0.563 3.437 13 O -0.587 6.587 14 C -0.179 4.179 15 C -0.067 4.067 16 C -0.125 4.125 17 C 0.111 3.889 18 N -0.571 5.571 19 C 0.081 3.919 20 C -0.217 4.217 21 C -0.063 4.063 22 O -0.557 6.557 23 Si 0.788 3.212 24 C -0.127 4.127 25 C -0.021 4.021 26 C -0.121 4.121 27 C -0.161 4.161 28 C -0.084 4.084 29 C -0.222 4.222 30 H 0.115 0.885 31 H 0.063 0.937 32 H 0.062 0.938 33 H 0.134 0.866 34 H 0.065 0.935 35 H 0.099 0.901 36 H 0.415 0.585 37 H 0.160 0.840 38 H 0.162 0.838 39 H 0.439 0.561 40 H 0.209 0.791 41 H 0.100 0.900 42 H 0.384 0.616 43 H -0.259 1.259 44 H -0.311 1.311 45 H 0.107 0.893 46 H 0.103 0.897 47 H 0.090 0.910 48 H 0.138 0.862 49 H 0.142 0.858 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.428 -8.796 3.167 9.457 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.253 6.253 3 C 0.065 3.935 4 C -0.183 4.183 5 C -0.034 4.034 6 C -0.084 4.084 7 H 0.130 0.870 8 C -0.180 4.180 9 C 0.008 3.992 10 H 0.104 0.896 11 N -0.346 5.346 12 C 0.353 3.647 13 O -0.469 6.469 14 C -0.183 4.183 15 C -0.086 4.086 16 C -0.145 4.145 17 C 0.002 3.998 18 N -0.175 5.175 19 C -0.046 4.046 20 C -0.224 4.224 21 C -0.171 4.171 22 O -0.366 6.366 23 Si 0.690 3.310 24 C -0.132 4.132 25 C -0.041 4.041 26 C -0.159 4.159 27 C -0.179 4.179 28 C -0.102 4.102 29 C -0.240 4.240 30 H 0.134 0.866 31 H 0.082 0.918 32 H 0.080 0.920 33 H 0.152 0.848 34 H 0.084 0.916 35 H 0.117 0.883 36 H 0.254 0.746 37 H 0.177 0.823 38 H 0.179 0.821 39 H 0.280 0.720 40 H 0.226 0.774 41 H 0.118 0.882 42 H 0.233 0.767 43 H -0.184 1.184 44 H -0.239 1.239 45 H 0.125 0.875 46 H 0.121 0.879 47 H 0.109 0.891 48 H 0.155 0.845 49 H 0.160 0.840 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.018 -7.721 2.927 8.500 hybrid contribution -1.049 -0.320 -1.200 1.626 sum 0.968 -8.040 1.727 8.281 Atomic orbital electron populations 1.23291 0.76677 1.05385 1.02089 1.86038 1.23255 1.27261 1.88793 1.19283 0.92847 0.84619 0.96786 1.20501 0.91451 0.98838 1.07472 1.19606 0.95469 0.91882 0.96415 1.21603 0.89941 0.99467 0.97378 0.87025 1.23607 0.97827 0.98906 0.97674 1.21914 0.83355 0.96368 0.97519 0.89601 1.45417 1.07710 1.12214 1.69231 1.18487 0.84078 0.86676 0.75482 1.90767 1.86388 1.16802 1.52901 1.19560 0.92927 0.95069 1.10759 1.20877 0.99367 0.90968 0.97431 1.20058 0.89091 1.01524 1.03845 1.18633 0.87579 0.92659 1.00949 1.41764 1.06151 1.11120 1.58416 1.22170 0.97394 0.85599 0.99466 1.20763 0.92510 0.96152 1.12984 1.24773 1.13014 0.93827 0.85458 1.86598 1.78387 1.54487 1.17082 0.94099 0.70271 0.77857 0.88726 1.19183 0.94070 0.93254 1.06670 1.20599 0.90709 0.99185 0.93574 1.23361 0.96695 0.99855 0.95984 1.21174 0.93845 0.98789 1.04125 1.21234 0.94965 0.97573 0.96446 1.21485 1.00922 0.92416 1.09214 0.86645 0.91826 0.91951 0.84842 0.91578 0.88265 0.74636 0.82265 0.82085 0.71997 0.77424 0.88222 0.76711 1.18427 1.23914 0.87467 0.87871 0.89139 0.84463 0.84003 0.84280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.34 -1.84 10.50 -92.38 -0.97 -2.81 16 3 C 0.11 0.58 6.69 22.50 0.15 0.73 16 4 C -0.16 -0.62 9.65 22.36 0.22 -0.41 16 5 C -0.03 -0.04 5.29 -19.88 -0.11 -0.15 16 6 C -0.07 0.16 3.86 -11.01 -0.04 0.12 16 7 H 0.11 -0.56 8.09 -2.39 -0.02 -0.58 16 8 C -0.14 -0.02 7.26 31.21 0.23 0.21 16 9 C 0.11 0.14 4.34 45.61 0.20 0.34 16 10 H 0.09 0.52 7.46 -2.39 -0.02 0.50 16 11 N -0.69 -0.81 5.21 -442.64 -2.31 -3.12 16 12 C 0.56 5.22 7.76 86.73 0.67 5.90 16 13 O -0.59 -11.02 15.93 -3.98 -0.06 -11.08 16 14 C -0.18 -1.15 5.87 -20.10 -0.12 -1.27 16 15 C -0.07 0.10 9.46 22.30 0.21 0.31 16 16 C -0.12 0.40 10.00 22.09 0.22 0.62 16 17 C 0.11 0.01 7.27 39.19 0.28 0.30 16 18 N -0.57 3.42 6.05 -187.49 -1.13 2.29 16 19 C 0.08 -0.41 10.43 82.98 0.87 0.46 16 20 C -0.22 -0.41 5.58 -18.61 -0.10 -0.52 16 21 C -0.06 -0.18 3.06 71.24 0.22 0.04 16 22 O -0.56 -3.98 12.88 -148.98 -1.92 -5.90 16 23 Si 0.79 -2.27 30.82 68.60 2.11 -0.15 16 24 C -0.13 -0.77 6.34 -20.21 -0.13 -0.90 16 25 C -0.02 -0.21 9.64 22.74 0.22 0.01 16 26 C -0.12 0.40 7.28 31.12 0.23 0.62 16 27 C -0.16 -0.17 8.61 22.28 0.19 0.03 16 28 C -0.08 -0.11 10.04 22.25 0.22 0.11 16 29 C -0.22 -0.61 9.04 22.37 0.20 -0.41 16 30 H 0.12 -0.63 8.14 -2.38 -0.02 -0.65 16 31 H 0.06 -0.24 7.66 -2.39 -0.02 -0.25 16 32 H 0.06 -0.22 7.66 -2.39 -0.02 -0.24 16 33 H 0.13 0.23 8.05 -2.91 -0.02 0.21 16 34 H 0.07 0.15 8.14 -2.38 -0.02 0.13 16 35 H 0.10 -0.04 6.31 -2.39 -0.02 -0.05 16 36 H 0.41 -2.32 6.70 -92.71 -0.62 -2.94 16 37 H 0.16 -1.42 6.36 -2.91 -0.02 -1.44 16 38 H 0.16 -1.61 8.06 -2.91 -0.02 -1.63 16 39 H 0.44 -5.72 8.96 -92.70 -0.83 -6.55 16 40 H 0.21 -2.51 6.27 -2.91 -0.02 -2.53 16 41 H 0.10 0.47 7.96 -2.39 -0.02 0.46 16 42 H 0.38 -0.01 8.70 -74.06 -0.64 -0.66 16 43 H -0.26 0.77 7.00 99.48 0.70 1.46 16 44 H -0.31 -1.97 7.11 99.48 0.71 -1.26 16 45 H 0.11 1.62 7.64 -2.91 -0.02 1.59 16 46 H 0.10 -0.36 7.72 -2.39 -0.02 -0.38 16 47 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 48 H 0.14 -0.27 6.65 -2.91 -0.02 -0.29 16 49 H 0.14 -0.40 8.06 -2.91 -0.02 -0.42 16 50 H 0.14 -0.12 6.30 -2.91 -0.02 -0.14 16 Total: 0.00 -29.34 411.84 -0.38 -29.72 By element: Atomic # 1 Polarization: -15.12 SS G_CDS: -1.05 Total: -16.17 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: 4.94 Total: 7.21 kcal Atomic # 7 Polarization: 2.61 SS G_CDS: -3.44 Total: -0.83 kcal Atomic # 8 Polarization: -16.83 SS G_CDS: -2.95 Total: -19.78 kcal Atomic # 14 Polarization: -2.27 SS G_CDS: 2.11 Total: -0.15 kcal Total: -29.34 -0.38 -29.72 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13287722.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.626 kcal (2) G-P(sol) polarization free energy of solvation -29.342 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.284 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.382 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.724 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.902 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds