Wall clock time and date at job start Sat Mar 6 2021 14:39:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35901 * 117.00336 * 2 1 4 4 C 1.38707 * 120.05613 * 179.72945 * 3 2 1 5 5 C 1.38171 * 119.93979 * 179.76882 * 4 3 2 6 6 C 1.50702 * 119.96847 * 180.22690 * 5 4 3 7 7 H 1.09003 * 112.84704 * 11.45494 * 6 5 4 8 8 C 1.53784 * 113.61234 * 142.75297 * 6 5 4 9 9 C 1.53779 * 87.07923 * 139.98125 * 8 6 5 10 10 H 1.08994 * 113.62070 * 220.02076 * 9 8 6 11 11 N 1.46506 * 113.68628 * 89.12921 * 9 8 6 12 12 C 1.34780 * 120.00018 * 107.46834 * 11 9 8 13 13 O 1.21516 * 119.99804 * 359.97438 * 12 11 9 14 14 C 1.48166 * 120.00084 * 179.97438 * 12 11 9 15 15 N 1.32711 * 119.72415 * 359.97438 * 14 12 11 16 16 C 1.31526 * 121.64510 * 180.02562 * 15 14 12 17 17 C 1.38557 * 120.90127 * 0.02562 * 16 15 14 18 18 C 1.50701 * 120.32575 * 179.97438 * 17 16 15 19 19 O 1.42904 * 109.47084 * 245.00083 * 18 17 16 20 20 Si 1.86306 * 109.46756 * 4.99723 * 18 17 16 21 21 C 1.38633 * 119.35117 * 359.97438 * 17 16 15 22 22 C 1.38589 * 118.48965 * 359.72926 * 21 17 16 23 23 C 1.53779 * 113.61826 * 240.25486 * 6 5 4 24 24 C 1.38236 * 120.05797 * 0.48328 * 5 4 3 25 25 C 1.38285 * 120.11138 * 359.77034 * 24 5 4 26 26 C 1.38122 * 120.05743 * 359.97438 * 25 24 5 27 27 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.46938 * 59.99705 * 1 2 3 29 29 H 1.09004 * 109.46926 * 299.99826 * 1 2 3 30 30 H 1.07994 * 120.02905 * 359.97438 * 4 3 2 31 31 H 1.08990 * 113.61923 * 254.53134 * 8 6 5 32 32 H 1.09005 * 113.61208 * 25.43970 * 8 6 5 33 33 H 0.96995 * 120.00174 * 287.46158 * 11 9 8 34 34 H 1.08001 * 119.54811 * 179.97438 * 16 15 14 35 35 H 1.08991 * 109.47270 * 124.99647 * 18 17 16 36 36 H 0.96698 * 113.99750 * 59.99959 * 19 18 17 37 37 H 1.48498 * 109.99884 * 179.97438 * 20 18 17 38 38 H 1.48502 * 110.00185 * 301.32018 * 20 18 17 39 39 H 1.08001 * 120.74908 * 179.97438 * 21 17 16 40 40 H 1.07994 * 120.47110 * 180.28931 * 22 21 17 41 41 H 1.09005 * 113.60933 * 334.56989 * 23 6 5 42 42 H 1.08997 * 113.61574 * 105.47150 * 23 6 5 43 43 H 1.07995 * 119.94519 * 179.74365 * 24 5 4 44 44 H 1.08002 * 119.97132 * 179.97438 * 25 24 5 45 45 H 1.08005 * 120.03124 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2108 0.0000 4 6 3.4312 1.2847 0.0057 5 6 4.0560 2.5170 0.0008 6 6 5.5609 2.5980 0.0018 7 1 6.0366 1.6368 -0.1931 8 6 6.1164 3.7475 -0.8556 9 6 7.1513 3.9739 0.2591 10 1 7.3470 5.0259 0.4662 11 7 8.3774 3.1894 0.0921 12 6 9.5217 3.7979 -0.2777 13 8 9.5363 4.9972 -0.4732 14 6 10.7617 3.0046 -0.4460 15 7 10.7396 1.6953 -0.2306 16 6 11.8179 0.9550 -0.3684 17 6 13.0255 1.5199 -0.7458 18 6 14.2532 0.6595 -0.8991 19 8 15.2235 1.0351 0.0804 20 14 13.7912 -1.1296 -0.6614 21 6 13.0933 2.8845 -0.9809 22 6 11.9399 3.6387 -0.8341 23 6 6.1374 3.3345 1.2224 24 6 3.3021 3.6757 0.0004 25 6 1.9210 3.6047 0.0001 26 6 1.2915 2.3753 -0.0004 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 0.5138 0.8900 30 1 4.0206 0.3799 0.0105 31 1 6.5544 3.4174 -1.7975 32 1 5.4194 4.5764 -0.9791 33 1 8.3656 2.2321 0.2479 34 1 11.7616 -0.1077 -0.1840 35 1 14.6713 0.7974 -1.8962 36 1 14.9190 0.9378 0.9931 37 1 14.9932 -1.9887 -0.8108 38 1 13.1905 -1.3249 0.6826 39 1 14.0229 3.3485 -1.2757 40 1 11.9553 4.7035 -1.0137 41 1 5.4461 4.0505 1.6670 42 1 6.5923 2.6711 1.9580 43 1 3.7924 4.6379 0.0008 44 1 1.3342 4.5114 0.0002 45 1 0.2129 2.3203 -0.0011 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_13287726.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:39:41 Heat of formation + Delta-G solvation = -6.953765 kcal Electronic energy + Delta-G solvation = -27922.035467 eV Core-core repulsion = 23872.528834 eV Total energy + Delta-G solvation = -4049.506633 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.146 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.99110 -41.43238 -40.62170 -39.48003 -38.10467 -37.80634 -34.69453 -33.64659 -32.99055 -32.05096 -30.90783 -28.30843 -28.00278 -26.75044 -26.01297 -25.07589 -23.99441 -23.51847 -22.40130 -21.91096 -20.27113 -19.31334 -18.81855 -18.60721 -17.78069 -17.22089 -16.99801 -16.78577 -16.67539 -16.65417 -16.47913 -16.25852 -16.07666 -15.73105 -15.49375 -14.99958 -14.59852 -14.49428 -14.43868 -14.33597 -14.17738 -13.97655 -13.54002 -13.52805 -13.29736 -13.19888 -12.72780 -12.69264 -12.33278 -12.15707 -12.12527 -11.66650 -11.60038 -11.34146 -11.25140 -11.11444 -10.79888 -10.65651 -10.37219 -10.04394 -9.70699 -9.10078 -5.11448 -0.59499 0.03648 0.36612 0.53649 1.07325 1.43341 1.61095 1.82449 1.95934 2.33423 2.66980 2.77856 2.91624 3.15980 3.40214 3.42189 3.60157 3.65980 3.68327 3.74652 3.86253 3.89098 3.92083 4.05074 4.11117 4.15977 4.20160 4.21801 4.32682 4.37233 4.51357 4.52808 4.57545 4.62221 4.64927 4.70566 4.75903 4.86387 4.93335 4.94636 4.98803 5.10634 5.12378 5.33224 5.37874 5.50311 5.54184 5.71235 5.83007 6.18929 6.31943 6.46917 6.61674 7.13324 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.129 3.871 4 C -0.149 4.149 5 C -0.032 4.032 6 C -0.074 4.074 7 H 0.100 0.900 8 C -0.142 4.142 9 C 0.117 3.883 10 H 0.108 0.892 11 N -0.693 5.693 12 C 0.576 3.424 13 O -0.527 6.527 14 C 0.081 3.919 15 N -0.453 5.453 16 C 0.102 3.898 17 C -0.148 4.148 18 C -0.074 4.074 19 O -0.526 6.526 20 Si 0.686 3.314 21 C -0.052 4.052 22 C -0.108 4.108 23 C -0.134 4.134 24 C -0.155 4.155 25 C -0.077 4.077 26 C -0.213 4.213 27 H 0.101 0.899 28 H 0.056 0.944 29 H 0.056 0.944 30 H 0.130 0.870 31 H 0.076 0.924 32 H 0.098 0.902 33 H 0.413 0.587 34 H 0.165 0.835 35 H 0.125 0.875 36 H 0.378 0.622 37 H -0.251 1.251 38 H -0.255 1.255 39 H 0.148 0.852 40 H 0.153 0.847 41 H 0.101 0.899 42 H 0.079 0.921 43 H 0.125 0.875 44 H 0.125 0.875 45 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.999 -2.447 -0.564 3.209 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.167 4.167 5 C -0.032 4.032 6 C -0.093 4.093 7 H 0.119 0.881 8 C -0.180 4.180 9 C 0.011 3.989 10 H 0.126 0.874 11 N -0.344 5.344 12 C 0.361 3.639 13 O -0.402 6.402 14 C -0.057 4.057 15 N -0.164 5.164 16 C -0.058 4.058 17 C -0.151 4.151 18 C -0.184 4.184 19 O -0.332 6.332 20 Si 0.587 3.413 21 C -0.078 4.078 22 C -0.128 4.128 23 C -0.172 4.172 24 C -0.173 4.173 25 C -0.095 4.095 26 C -0.232 4.232 27 H 0.119 0.881 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.147 0.853 31 H 0.095 0.905 32 H 0.116 0.884 33 H 0.249 0.751 34 H 0.181 0.819 35 H 0.143 0.857 36 H 0.226 0.774 37 H -0.176 1.176 38 H -0.179 1.179 39 H 0.166 0.834 40 H 0.171 0.829 41 H 0.119 0.881 42 H 0.097 0.903 43 H 0.143 0.857 44 H 0.143 0.857 45 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -2.262 -2.737 -0.503 3.586 hybrid contribution 0.736 0.562 0.772 1.205 sum -1.526 -2.175 0.269 2.670 Atomic orbital electron populations 1.23084 0.78120 1.04174 1.01426 1.86079 1.21591 1.26917 1.88596 1.19038 0.92328 0.84243 0.96011 1.20311 0.91308 0.98243 1.06861 1.19447 0.94700 0.92159 0.96867 1.21626 0.90869 0.99318 0.97446 0.88138 1.23565 0.97868 0.98474 0.98128 1.21925 0.83150 0.97062 0.96746 0.87433 1.45496 1.07958 1.12476 1.68481 1.17842 0.82611 0.86572 0.76924 1.90820 1.85161 1.13910 1.50302 1.21156 0.94311 0.90369 0.99871 1.67528 1.30772 1.05480 1.12609 1.22679 0.87490 0.99840 0.95750 1.21587 0.97085 0.96063 1.00325 1.25018 0.88832 1.08264 0.96298 1.86642 1.40133 1.87948 1.18469 0.94967 0.84858 0.74558 0.86955 1.21571 0.98746 0.92778 0.94733 1.22230 0.91734 1.02524 0.96344 1.23421 0.97494 1.00002 0.96268 1.20920 0.93630 0.98164 1.04552 1.20943 0.94586 0.97049 0.96899 1.21269 1.00141 0.92474 1.09276 0.88059 0.92561 0.92560 0.85254 0.90538 0.88366 0.75080 0.81873 0.85715 0.77426 1.17581 1.17933 0.83449 0.82940 0.88107 0.90278 0.85678 0.85675 0.85524 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.78 10.50 -19.43 -0.20 -0.98 16 3 C 0.13 0.31 6.69 -39.22 -0.26 0.05 16 4 C -0.15 -0.27 9.65 -39.43 -0.38 -0.65 16 5 C -0.03 -0.02 5.29 -104.65 -0.55 -0.57 16 6 C -0.07 0.07 3.86 -90.96 -0.35 -0.28 16 7 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 8 C -0.14 0.10 7.25 -25.92 -0.19 -0.09 16 9 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 10 H 0.11 0.10 7.46 -51.93 -0.39 -0.28 16 11 N -0.69 -0.29 5.26 -53.86 -0.28 -0.57 16 12 C 0.58 1.56 7.81 -12.18 -0.10 1.46 16 13 O -0.53 -2.95 15.92 5.35 0.09 -2.87 16 14 C 0.08 0.13 6.75 -83.01 -0.56 -0.43 16 15 N -0.45 -0.32 9.54 -9.80 -0.09 -0.41 16 16 C 0.10 -0.10 9.84 -17.56 -0.17 -0.27 16 17 C -0.15 0.19 5.37 -104.36 -0.56 -0.37 16 18 C -0.07 0.15 2.82 36.01 0.10 0.26 16 19 O -0.53 0.24 12.84 -35.23 -0.45 -0.21 16 20 Si 0.69 -1.84 29.91 -169.99 -5.08 -6.92 16 21 C -0.05 0.04 9.83 -39.31 -0.39 -0.35 16 22 C -0.11 -0.07 9.63 -39.05 -0.38 -0.45 16 23 C -0.13 0.20 7.29 -25.92 -0.19 0.01 16 24 C -0.15 -0.05 8.61 -39.56 -0.34 -0.39 16 25 C -0.08 -0.04 10.04 -39.61 -0.40 -0.44 16 26 C -0.21 -0.26 9.04 -39.43 -0.36 -0.61 16 27 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 28 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 29 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 30 H 0.13 0.12 8.05 -52.49 -0.42 -0.31 16 31 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 32 H 0.10 -0.12 6.31 -51.93 -0.33 -0.44 16 33 H 0.41 -0.36 8.03 -40.82 -0.33 -0.69 16 34 H 0.16 -0.50 4.86 -52.49 -0.25 -0.76 16 35 H 0.13 -0.37 7.96 -51.93 -0.41 -0.78 16 36 H 0.38 -1.20 8.70 45.56 0.40 -0.81 16 37 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 38 H -0.25 0.24 7.01 56.52 0.40 0.64 16 39 H 0.15 -0.32 8.06 -52.49 -0.42 -0.74 16 40 H 0.15 0.05 7.64 -52.49 -0.40 -0.35 16 41 H 0.10 -0.18 7.72 -51.93 -0.40 -0.58 16 42 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 43 H 0.13 -0.16 6.65 -52.49 -0.35 -0.51 16 44 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 45 H 0.13 -0.06 6.30 -52.48 -0.33 -0.39 16 LS Contribution 375.63 15.07 5.66 5.66 Total: 0.00 -7.90 375.63 -10.49 -18.39 By element: Atomic # 1 Polarization: -3.86 SS G_CDS: -5.75 Total: -9.62 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -4.37 Total: -2.47 kcal Atomic # 7 Polarization: -0.61 SS G_CDS: -0.38 Total: -0.98 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.57 Total: -4.06 kcal Atomic # 14 Polarization: -1.84 SS G_CDS: -5.08 Total: -6.92 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -7.90 -10.49 -18.39 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13287726.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.440 kcal (2) G-P(sol) polarization free energy of solvation -7.905 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.535 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.394 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.954 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds