Wall clock time and date at job start Sat Mar 6 2021 14:39:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35906 * 116.99384 * 2 1 4 4 C 1.38701 * 120.05871 * 0.02562 * 3 2 1 5 5 C 1.38171 * 119.94682 * 179.97438 * 4 3 2 6 6 C 1.38244 * 120.05365 * 359.97186 * 5 4 3 7 7 C 1.38299 * 120.11074 * 0.02562 * 6 5 4 8 8 C 1.50693 * 119.97225 * 179.97438 * 7 6 5 9 9 H 1.08995 * 112.85195 * 168.80562 * 8 7 6 10 10 C 1.53785 * 113.61331 * 300.00319 * 8 7 6 11 11 C 1.53781 * 87.08277 * 140.06613 * 10 8 7 12 12 H 1.09002 * 113.61228 * 220.01683 * 11 10 8 13 13 N 1.46500 * 113.61711 * 89.19510 * 11 10 8 14 14 C 1.34778 * 119.99919 * 156.52821 * 13 11 10 15 15 O 1.21624 * 120.00204 * 0.02562 * 14 13 11 16 16 C 1.47266 * 119.99961 * 180.02562 * 14 13 11 17 17 C 1.36768 * 126.94177 * 359.68688 * 16 14 13 18 18 N 1.34660 * 108.39673 * 179.83927 * 17 16 14 19 19 C 1.46502 * 124.85112 * 180.19554 * 18 17 16 20 20 C 1.36443 * 110.29418 * 0.44175 * 18 17 16 21 21 C 1.50700 * 125.56893 * 179.70915 * 20 18 17 22 22 O 1.42898 * 109.47248 * 329.99918 * 21 20 18 23 23 Si 1.86303 * 109.47100 * 209.99867 * 21 20 18 24 24 C 1.34487 * 108.85910 * 359.73058 * 20 18 17 25 25 C 1.53776 * 113.69232 * 37.53336 * 8 7 6 26 26 C 1.38117 * 120.05444 * 0.27680 * 7 6 5 27 27 H 1.08994 * 109.47025 * 299.99401 * 1 2 3 28 28 H 1.09000 * 109.47251 * 59.99747 * 1 2 3 29 29 H 1.09003 * 109.46457 * 179.97438 * 1 2 3 30 30 H 1.08005 * 120.03074 * 359.97438 * 4 3 2 31 31 H 1.07996 * 119.97665 * 179.97438 * 5 4 3 32 32 H 1.07993 * 119.94568 * 180.02562 * 6 5 4 33 33 H 1.08993 * 113.61827 * 25.50972 * 10 8 7 34 34 H 1.09006 * 113.60734 * 254.61000 * 10 8 7 35 35 H 0.96998 * 119.99853 * 336.53388 * 13 11 10 36 36 H 1.08002 * 125.80378 * 359.97438 * 17 16 14 37 37 H 1.09001 * 109.46519 * 270.28390 * 19 18 17 38 38 H 1.08992 * 109.46829 * 30.28041 * 19 18 17 39 39 H 1.08998 * 109.47156 * 150.28685 * 19 18 17 40 40 H 1.09005 * 109.47261 * 90.00288 * 21 20 18 41 41 H 0.96701 * 113.99954 * 179.97438 * 22 21 20 42 42 H 1.48501 * 109.99729 * 60.00373 * 23 21 20 43 43 H 1.48502 * 109.99863 * 181.31837 * 23 21 20 44 44 H 1.08000 * 126.82923 * 180.02562 * 24 20 18 45 45 H 1.09003 * 113.61687 * 105.45764 * 25 8 7 46 46 H 1.09009 * 113.61565 * 334.56112 * 25 8 7 47 47 H 1.08004 * 120.03097 * 179.72577 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 1.2916 2.3749 0.0005 5 6 1.9211 3.6049 0.0011 6 6 3.3018 3.6760 0.0017 7 6 4.0562 2.5169 0.0012 8 6 5.5609 2.5980 0.0012 9 1 6.0366 1.6369 0.1958 10 6 6.1381 3.3353 -1.2187 11 6 7.1529 3.9724 -0.2548 12 1 7.3496 5.0246 -0.4609 13 7 8.3781 3.1865 -0.0888 14 6 9.5157 3.7883 0.3115 15 8 9.5251 4.9837 0.5353 16 6 10.7473 2.9983 0.4779 17 6 10.8958 1.6543 0.2729 18 7 12.1756 1.3239 0.5304 19 6 12.7298 -0.0278 0.4202 20 6 12.8811 2.4270 0.9138 21 6 14.3406 2.4475 1.2887 22 8 14.7050 1.1868 1.8542 23 14 14.6426 3.7981 2.5359 24 6 12.0611 3.4929 0.9031 25 6 6.1178 3.7460 0.8596 26 6 3.4316 1.2850 -0.0057 27 1 -0.3633 0.5137 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3632 -1.0277 -0.0005 30 1 0.2129 2.3200 0.0005 31 1 1.3343 4.5115 0.0011 32 1 3.7920 4.6382 0.0025 33 1 5.4476 4.0524 -1.6625 34 1 6.5922 2.6720 -1.9550 35 1 8.3705 2.2331 -0.2670 36 1 10.1192 0.9739 -0.0440 37 1 12.6185 -0.5448 1.3733 38 1 12.1962 -0.5770 -0.3555 39 1 13.7867 0.0329 0.1609 40 1 14.9418 2.6339 0.3987 41 1 15.6332 1.1280 2.1189 42 1 13.8287 3.5556 3.7541 43 1 16.0839 3.8495 2.8899 44 1 12.3189 4.5106 1.1566 45 1 6.5555 3.4145 1.8013 46 1 5.4216 4.5755 0.9842 47 1 4.0211 0.3801 -0.0105 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_13287730.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:39:44 Heat of formation + Delta-G solvation = 4.364988 kcal Electronic energy + Delta-G solvation = -28686.734736 eV Core-core repulsion = 24610.407442 eV Total energy + Delta-G solvation = -4076.327294 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.38475 -41.50337 -40.58838 -39.22710 -37.93719 -37.71887 -34.32903 -33.67782 -32.15103 -31.48130 -30.76126 -28.28839 -27.72777 -26.67739 -26.44245 -25.69022 -23.77744 -23.45583 -22.19670 -20.98180 -20.40847 -20.11835 -18.69563 -18.57758 -18.45744 -17.20990 -17.05807 -16.83360 -16.78578 -16.64866 -16.55582 -15.93072 -15.75394 -15.51797 -15.40944 -15.15007 -14.55029 -14.44247 -14.39034 -14.19887 -13.95018 -13.82164 -13.50544 -13.42503 -13.32558 -13.23643 -13.09607 -13.07668 -12.71358 -12.65426 -12.28405 -12.07769 -12.00541 -11.62744 -11.54403 -11.20755 -10.87138 -10.69942 -9.91537 -9.68813 -9.49624 -9.12280 -9.08383 -4.92040 0.38394 0.55200 0.82571 1.05537 1.52989 1.59843 1.88573 2.06217 2.31700 2.34622 2.73280 2.80324 3.01081 3.49646 3.63854 3.73029 3.77661 3.81155 3.86769 3.88855 3.98006 4.07856 4.17980 4.18276 4.21689 4.22237 4.28373 4.33653 4.39563 4.51662 4.53483 4.58379 4.59905 4.66462 4.72242 4.77820 4.86798 4.97995 5.00612 5.04741 5.08054 5.14304 5.22303 5.39224 5.54041 5.65374 5.74352 5.80390 5.84512 6.05865 6.17623 6.26642 6.47763 6.72532 7.53506 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.213 4.213 5 C -0.077 4.077 6 C -0.154 4.154 7 C -0.031 4.031 8 C -0.074 4.074 9 H 0.097 0.903 10 C -0.134 4.134 11 C 0.123 3.877 12 H 0.106 0.894 13 N -0.715 5.715 14 C 0.595 3.405 15 O -0.539 6.539 16 C -0.226 4.226 17 C 0.049 3.951 18 N -0.423 5.423 19 C 0.075 3.925 20 C 0.024 3.976 21 C -0.050 4.050 22 O -0.543 6.543 23 Si 0.707 3.293 24 C -0.134 4.134 25 C -0.143 4.143 26 C -0.149 4.149 27 H 0.056 0.944 28 H 0.056 0.944 29 H 0.101 0.899 30 H 0.127 0.873 31 H 0.125 0.875 32 H 0.126 0.874 33 H 0.099 0.901 34 H 0.076 0.924 35 H 0.397 0.603 36 H 0.170 0.830 37 H 0.076 0.924 38 H 0.079 0.921 39 H 0.093 0.907 40 H 0.080 0.920 41 H 0.384 0.616 42 H -0.253 1.253 43 H -0.258 1.258 44 H 0.159 0.841 45 H 0.075 0.925 46 H 0.096 0.904 47 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.473 -3.054 -2.388 3.906 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.083 3.917 4 C -0.232 4.232 5 C -0.095 4.095 6 C -0.172 4.172 7 C -0.031 4.031 8 C -0.093 4.093 9 H 0.116 0.884 10 C -0.172 4.172 11 C 0.018 3.982 12 H 0.124 0.876 13 N -0.366 5.366 14 C 0.384 3.616 15 O -0.416 6.416 16 C -0.236 4.236 17 C -0.088 4.088 18 N -0.097 5.097 19 C -0.066 4.066 20 C -0.085 4.085 21 C -0.159 4.159 22 O -0.351 6.351 23 Si 0.606 3.394 24 C -0.158 4.158 25 C -0.182 4.182 26 C -0.168 4.168 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.119 0.881 30 H 0.145 0.855 31 H 0.143 0.857 32 H 0.144 0.856 33 H 0.117 0.883 34 H 0.095 0.905 35 H 0.231 0.769 36 H 0.187 0.813 37 H 0.095 0.905 38 H 0.098 0.902 39 H 0.112 0.888 40 H 0.098 0.902 41 H 0.233 0.767 42 H -0.176 1.176 43 H -0.183 1.183 44 H 0.176 0.824 45 H 0.094 0.906 46 H 0.114 0.886 47 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 0.397 -2.649 -1.556 3.097 hybrid contribution 0.210 -1.632 -0.023 1.645 sum 0.607 -4.280 -1.578 4.602 Atomic orbital electron populations 1.23081 0.78129 1.04152 1.01439 1.86078 1.21592 1.26948 1.88628 1.19037 0.92328 0.84231 0.96070 1.21262 1.00126 0.92479 1.09348 1.20949 0.94606 0.97037 0.96869 1.20938 0.93615 0.98216 1.04428 1.19470 0.94801 0.92131 0.96733 1.21612 0.90711 0.99239 0.97716 0.88437 1.23421 0.97692 0.99960 0.96157 1.21788 0.83256 0.97114 0.96069 0.87594 1.45499 1.09010 1.11780 1.70346 1.17354 0.81886 0.86662 0.75669 1.90783 1.85324 1.14887 1.50624 1.20226 0.94602 0.92683 1.16117 1.21902 0.86744 0.95867 1.04243 1.43449 1.08102 1.08412 1.49750 1.22148 1.01115 0.80195 1.03149 1.19658 0.92956 0.86879 1.08969 1.24433 0.92139 0.94813 1.04521 1.86525 1.32997 1.32560 1.83032 0.94291 0.80264 0.85290 0.79590 1.21532 0.90523 0.97982 1.05731 1.23573 0.98070 0.98266 0.98290 1.20299 0.91283 0.98204 1.07021 0.92555 0.92555 0.88082 0.85540 0.85662 0.85614 0.88260 0.90488 0.76872 0.81271 0.90522 0.90212 0.88812 0.90233 0.76717 1.17632 1.18286 0.82399 0.90636 0.88572 0.85372 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.83 10.50 -19.44 -0.20 -1.03 16 3 C 0.13 0.33 6.69 -39.22 -0.26 0.07 16 4 C -0.21 -0.30 9.04 -39.44 -0.36 -0.66 16 5 C -0.08 -0.06 10.04 -39.60 -0.40 -0.46 16 6 C -0.15 -0.10 8.61 -39.56 -0.34 -0.44 16 7 C -0.03 -0.03 5.29 -104.65 -0.55 -0.58 16 8 C -0.07 0.06 3.86 -90.96 -0.35 -0.29 16 9 H 0.10 -0.16 8.09 -51.93 -0.42 -0.58 16 10 C -0.13 0.18 7.29 -25.92 -0.19 0.00 16 11 C 0.12 0.03 4.30 -67.12 -0.29 -0.26 16 12 H 0.11 0.19 7.50 -51.93 -0.39 -0.19 16 13 N -0.72 -0.23 5.26 -54.14 -0.28 -0.52 16 14 C 0.60 2.18 7.81 -12.59 -0.10 2.08 16 15 O -0.54 -4.04 16.59 5.26 0.09 -3.95 16 16 C -0.23 -0.58 6.29 -103.35 -0.65 -1.23 16 17 C 0.05 0.01 10.83 -16.84 -0.18 -0.18 16 18 N -0.42 -0.28 3.09 -119.90 -0.37 -0.65 16 19 C 0.08 -0.14 9.81 59.85 0.59 0.45 16 20 C 0.02 0.04 6.17 -81.87 -0.51 -0.47 16 21 C -0.05 0.03 2.86 36.01 0.10 0.14 16 22 O -0.54 0.45 10.29 -35.23 -0.36 0.09 16 23 Si 0.71 -0.48 31.12 -169.99 -5.29 -5.77 16 24 C -0.13 -0.34 9.49 -37.50 -0.36 -0.69 16 25 C -0.14 0.02 7.26 -25.92 -0.19 -0.17 16 26 C -0.15 -0.29 9.65 -39.43 -0.38 -0.67 16 27 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 28 H 0.06 -0.10 7.66 -51.93 -0.40 -0.49 16 29 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 30 H 0.13 -0.04 6.30 -52.48 -0.33 -0.37 16 31 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 32 H 0.13 -0.11 6.66 -52.49 -0.35 -0.46 16 33 H 0.10 -0.15 7.72 -51.93 -0.40 -0.55 16 34 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.40 -0.94 7.65 -40.82 -0.31 -1.25 16 36 H 0.17 -0.59 7.45 -52.49 -0.39 -0.98 16 37 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 38 H 0.08 -0.30 8.13 -51.93 -0.42 -0.72 16 39 H 0.09 -0.17 6.73 -51.93 -0.35 -0.52 16 40 H 0.08 -0.18 7.96 -51.93 -0.41 -0.60 16 41 H 0.38 -1.75 8.74 45.56 0.40 -1.35 16 42 H -0.25 -0.84 7.11 56.52 0.40 -0.44 16 43 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 44 H 0.16 0.20 6.89 -52.49 -0.36 -0.16 16 45 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 46 H 0.10 -0.05 6.32 -51.92 -0.33 -0.37 16 47 H 0.13 0.12 8.05 -52.48 -0.42 -0.30 16 LS Contribution 386.30 15.07 5.82 5.82 Total: 0.00 -10.10 386.30 -10.62 -20.72 By element: Atomic # 1 Polarization: -5.70 SS G_CDS: -6.60 Total: -12.30 kcal Atomic # 6 Polarization: 1.02 SS G_CDS: -3.42 Total: -2.40 kcal Atomic # 7 Polarization: -0.52 SS G_CDS: -0.65 Total: -1.17 kcal Atomic # 8 Polarization: -4.42 SS G_CDS: -0.48 Total: -4.90 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: -5.29 Total: -5.77 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -10.10 -10.62 -20.72 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13287730.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.084 kcal (2) G-P(sol) polarization free energy of solvation -10.098 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.986 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.621 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.719 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.365 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds