Wall clock time and date at job start Sat Mar 6 2021 14:39:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35900 * 116.99941 * 2 1 4 4 C 1.38706 * 120.05761 * 359.97438 * 3 2 1 5 5 C 1.38171 * 119.94417 * 180.02562 * 4 3 2 6 6 C 1.38244 * 120.05436 * 0.26182 * 5 4 3 7 7 C 1.38293 * 120.11190 * 359.48377 * 6 5 4 8 8 C 1.50700 * 119.97224 * 180.23640 * 7 6 5 9 9 H 1.08999 * 112.84644 * 191.47301 * 8 7 6 10 10 C 1.53779 * 113.61400 * 322.78248 * 8 7 6 11 11 C 1.53771 * 87.08094 * 139.98192 * 10 8 7 12 12 H 1.09002 * 113.61492 * 220.01855 * 11 10 8 13 13 N 1.46501 * 113.69402 * 89.12511 * 11 10 8 14 14 C 1.34780 * 120.00106 * 107.46152 * 13 11 10 15 15 O 1.21592 * 119.99676 * 0.02562 * 14 13 11 16 16 C 1.47602 * 120.00115 * 179.97438 * 14 13 11 17 17 C 1.39713 * 120.08606 * 0.02562 * 16 14 13 18 18 C 1.37722 * 119.90869 * 179.97438 * 17 16 14 19 19 C 1.50703 * 119.95292 * 179.97438 * 18 17 16 20 20 C 1.38974 * 120.08968 * 0.02562 * 18 17 16 21 21 O 1.35713 * 119.91250 * 179.97438 * 20 18 17 22 22 C 1.39012 * 120.17652 * 359.95409 * 20 18 17 23 23 C 1.50702 * 119.95867 * 180.02562 * 22 20 18 24 24 O 1.42901 * 109.46748 * 285.00372 * 23 22 20 25 25 Si 1.86295 * 109.47444 * 165.00175 * 23 22 20 26 26 C 1.37683 * 120.08832 * 359.76821 * 22 20 18 27 27 C 1.53780 * 87.08377 * 334.56366 * 11 10 8 28 28 C 1.38125 * 120.05080 * 0.51384 * 7 6 5 29 29 H 1.08999 * 109.46871 * 59.99979 * 1 2 3 30 30 H 1.08997 * 109.47392 * 180.02562 * 1 2 3 31 31 H 1.09009 * 109.47182 * 300.00275 * 1 2 3 32 32 H 1.07999 * 120.02792 * 0.04866 * 4 3 2 33 33 H 1.08002 * 119.96962 * 179.97438 * 5 4 3 34 34 H 1.08001 * 119.94456 * 179.72259 * 6 5 4 35 35 H 1.09003 * 113.60725 * 254.52949 * 10 8 7 36 36 H 1.08994 * 113.61335 * 25.42735 * 10 8 7 37 37 H 0.96996 * 120.00212 * 287.46379 * 13 11 10 38 38 H 1.07998 * 120.04709 * 359.97438 * 17 16 14 39 39 H 1.09001 * 109.46864 * 90.00449 * 19 18 17 40 40 H 1.09003 * 109.46779 * 209.99635 * 19 18 17 41 41 H 1.08996 * 109.47449 * 330.00065 * 19 18 17 42 42 H 0.96700 * 114.00221 * 89.99844 * 21 20 18 43 43 H 1.08998 * 109.47076 * 44.99797 * 23 22 20 44 44 H 0.96700 * 114.00203 * 299.99292 * 24 23 22 45 45 H 1.48498 * 110.00134 * 58.67986 * 25 23 22 46 46 H 1.48501 * 110.00118 * 180.02562 * 25 23 22 47 47 H 1.08003 * 120.04456 * 180.27510 * 26 22 20 48 48 H 1.09003 * 113.61326 * 270.88881 * 27 11 10 49 49 H 1.08998 * 113.68944 * 139.99228 * 27 11 10 50 50 H 1.08006 * 120.01931 * 179.72616 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2917 2.3749 -0.0005 5 6 1.9214 3.6048 -0.0011 6 6 3.3020 3.6757 -0.0065 7 6 4.0563 2.5166 -0.0007 8 6 5.5611 2.5977 -0.0013 9 1 6.0366 1.6364 -0.1963 10 6 6.1158 3.7469 -0.8595 11 6 7.1518 3.9736 0.2540 12 1 7.3476 5.0258 0.4606 13 7 8.3777 3.1891 0.0861 14 6 9.5216 3.7975 -0.2851 15 8 9.5362 4.9976 -0.4804 16 6 10.7568 3.0072 -0.4537 17 6 10.7421 1.6283 -0.2293 18 6 11.8966 0.8944 -0.3882 19 6 11.8820 -0.5930 -0.1459 20 6 13.0752 1.5237 -0.7706 21 8 14.2109 0.7971 -0.9255 22 6 13.0938 2.8954 -0.9952 23 6 14.3745 3.5727 -1.4102 24 8 15.2438 3.6805 -0.2812 25 14 13.9931 5.2745 -2.0651 26 6 11.9426 3.6353 -0.8441 27 6 6.1388 3.3347 1.2186 28 6 3.4315 1.2848 -0.0001 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 0.2131 2.3200 -0.0002 33 1 1.3345 4.5114 -0.0019 34 1 3.7924 4.6380 -0.0115 35 1 6.5528 3.4164 -1.8018 36 1 5.4186 4.5756 -0.9827 37 1 8.3661 2.2319 0.2422 38 1 9.8267 1.1386 0.0683 39 1 11.6419 -1.1101 -1.0749 40 1 12.8629 -0.9135 0.2053 41 1 11.1308 -0.8311 0.6071 42 1 14.3372 0.4505 -1.8194 43 1 14.8609 2.9845 -2.1884 44 1 14.8750 4.1923 0.4517 45 1 13.3011 6.0761 -1.0240 46 1 15.2479 5.9527 -2.4784 47 1 11.9568 4.7003 -1.0231 48 1 5.4479 4.0508 1.6635 49 1 6.5931 2.6714 1.9545 50 1 4.0211 0.3799 0.0000 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_13287732.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:39:47 Heat of formation + Delta-G solvation = -63.832796 kcal Electronic energy + Delta-G solvation = -32471.033685 eV Core-core repulsion = 28010.266691 eV Total energy + Delta-G solvation = -4460.766993 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -41.91988 -41.36405 -40.68885 -39.62799 -37.98940 -37.90104 -37.45828 -34.71206 -33.96630 -32.30061 -31.64470 -30.77907 -28.23527 -27.98537 -26.99897 -26.67742 -26.21162 -24.66010 -23.55619 -22.42056 -22.01053 -21.62028 -20.29440 -19.58197 -18.94706 -18.62805 -18.12203 -17.29821 -17.20435 -16.93118 -16.82865 -16.66315 -16.54287 -16.18370 -16.06164 -15.85457 -15.70889 -15.47548 -15.03545 -14.74127 -14.43340 -14.41301 -14.30184 -14.07344 -13.97699 -13.85766 -13.48485 -13.28208 -13.25726 -13.19814 -12.90197 -12.78685 -12.65942 -12.46770 -12.28480 -12.10164 -11.92587 -11.65049 -11.62359 -11.56927 -11.24870 -11.12771 -10.62604 -10.20817 -9.97427 -9.73729 -9.63887 -9.14573 -5.01772 -0.39194 0.07380 0.33674 0.48845 1.20400 1.52456 1.60197 1.85728 1.98553 2.36023 2.55837 2.74774 3.12713 3.30750 3.46643 3.52293 3.55476 3.70300 3.72116 3.76308 3.88756 3.97619 4.02628 4.10510 4.17378 4.19869 4.28598 4.35098 4.36976 4.39826 4.47241 4.55706 4.62003 4.63808 4.68024 4.71521 4.74549 4.80237 4.83389 4.85895 4.98088 5.04139 5.05310 5.08491 5.11272 5.16237 5.22157 5.33614 5.35329 5.48518 5.53411 5.61602 5.71451 5.83450 6.39641 6.42706 6.44473 6.77312 7.10239 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.339 6.339 3 C 0.109 3.891 4 C -0.223 4.223 5 C -0.085 4.085 6 C -0.161 4.161 7 C -0.034 4.034 8 C -0.067 4.067 9 H 0.112 0.888 10 C -0.139 4.139 11 C 0.115 3.885 12 H 0.089 0.911 13 N -0.693 5.693 14 C 0.562 3.438 15 O -0.577 6.577 16 C -0.151 4.151 17 C -0.054 4.054 18 C -0.120 4.120 19 C -0.112 4.112 20 C 0.160 3.840 21 O -0.496 6.496 22 C -0.153 4.153 23 C -0.061 4.061 24 O -0.540 6.540 25 Si 0.749 3.251 26 C -0.065 4.065 27 C -0.124 4.124 28 C -0.164 4.164 29 H 0.062 0.938 30 H 0.115 0.885 31 H 0.062 0.938 32 H 0.138 0.862 33 H 0.142 0.858 34 H 0.139 0.861 35 H 0.071 0.929 36 H 0.100 0.900 37 H 0.415 0.585 38 H 0.162 0.838 39 H 0.088 0.912 40 H 0.068 0.932 41 H 0.083 0.917 42 H 0.413 0.587 43 H 0.133 0.867 44 H 0.383 0.617 45 H -0.295 1.295 46 H -0.292 1.292 47 H 0.132 0.868 48 H 0.102 0.898 49 H 0.088 0.912 50 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.095 -5.447 -1.578 7.624 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.241 4.241 5 C -0.103 4.103 6 C -0.179 4.179 7 C -0.034 4.034 8 C -0.085 4.085 9 H 0.130 0.870 10 C -0.178 4.178 11 C 0.009 3.991 12 H 0.107 0.893 13 N -0.345 5.345 14 C 0.351 3.649 15 O -0.457 6.457 16 C -0.154 4.154 17 C -0.072 4.072 18 C -0.121 4.121 19 C -0.169 4.169 20 C 0.114 3.886 21 O -0.310 6.310 22 C -0.154 4.154 23 C -0.171 4.171 24 O -0.348 6.348 25 Si 0.656 3.344 26 C -0.083 4.083 27 C -0.162 4.162 28 C -0.183 4.183 29 H 0.081 0.919 30 H 0.133 0.867 31 H 0.081 0.919 32 H 0.156 0.844 33 H 0.160 0.840 34 H 0.157 0.843 35 H 0.089 0.911 36 H 0.118 0.882 37 H 0.254 0.746 38 H 0.180 0.820 39 H 0.106 0.894 40 H 0.087 0.913 41 H 0.102 0.898 42 H 0.274 0.726 43 H 0.151 0.849 44 H 0.231 0.769 45 H -0.222 1.222 46 H -0.219 1.219 47 H 0.149 0.851 48 H 0.121 0.879 49 H 0.107 0.893 50 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -4.432 -4.202 -1.422 6.271 hybrid contribution -0.162 -0.105 0.765 0.789 sum -4.594 -4.307 -0.658 6.331 Atomic orbital electron populations 1.23288 0.76702 1.05371 1.02066 1.86038 1.23228 1.27300 1.88793 1.19297 0.92892 0.84599 0.96798 1.21483 1.00903 0.92470 1.09270 1.21237 0.95049 0.97520 0.96464 1.21179 0.93783 0.98826 1.04079 1.19622 0.95571 0.91814 0.96376 1.21626 0.89852 0.99617 0.97411 0.86982 1.23547 0.97684 0.98785 0.97753 1.21880 0.83225 0.96418 0.97558 0.89314 1.45454 1.07855 1.12359 1.68818 1.18372 0.83890 0.86740 0.75918 1.90794 1.86197 1.16366 1.52366 1.19770 0.93402 0.94600 1.07603 1.21363 0.98966 0.91270 0.95607 1.20446 0.91852 0.98431 1.01353 1.20770 1.03872 0.88734 1.03488 1.18432 0.85630 0.88800 0.95740 1.84733 1.38752 1.70170 1.37360 1.20508 0.95710 0.94509 1.04716 1.24899 0.89866 1.10107 0.92253 1.86613 1.44385 1.76062 1.27742 0.94186 0.79792 0.73963 0.86491 1.21109 0.91311 1.00218 0.95703 1.23378 0.96850 0.99903 0.96055 1.20515 0.91405 0.98906 1.07474 0.91926 0.86664 0.91896 0.84381 0.84046 0.84335 0.91054 0.88190 0.74648 0.82027 0.89371 0.91306 0.89800 0.72602 0.84925 0.76874 1.22243 1.21943 0.85089 0.87943 0.89326 0.84840 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -1.55 10.50 -92.42 -0.97 -2.52 16 3 C 0.11 0.47 6.69 22.50 0.15 0.62 16 4 C -0.22 -0.39 9.04 22.37 0.20 -0.19 16 5 C -0.08 -0.01 10.04 22.26 0.22 0.22 16 6 C -0.16 0.10 8.62 22.28 0.19 0.29 16 7 C -0.03 0.01 5.29 -19.88 -0.11 -0.09 16 8 C -0.07 0.31 3.86 -11.01 -0.04 0.27 16 9 H 0.11 -0.82 8.09 -2.39 -0.02 -0.84 16 10 C -0.14 0.43 7.25 31.12 0.23 0.65 16 11 C 0.11 -0.23 4.32 45.51 0.20 -0.03 16 12 H 0.09 0.22 7.46 -2.39 -0.02 0.20 16 13 N -0.69 1.74 5.22 -443.13 -2.31 -0.57 16 14 C 0.56 2.50 7.76 86.71 0.67 3.17 16 15 O -0.58 -7.59 15.94 -4.00 -0.06 -7.65 16 16 C -0.15 -0.24 5.87 -20.08 -0.12 -0.36 16 17 C -0.05 0.21 9.18 22.50 0.21 0.42 16 18 C -0.12 0.35 5.89 -19.81 -0.12 0.24 16 19 C -0.11 0.76 9.79 71.24 0.70 1.46 16 20 C 0.16 -0.03 6.66 22.63 0.15 0.12 16 21 O -0.50 0.64 11.84 -90.34 -1.07 -0.43 16 22 C -0.15 -0.21 5.27 -19.81 -0.10 -0.31 16 23 C -0.06 -0.07 2.37 71.24 0.17 0.10 16 24 O -0.54 -2.89 12.88 -148.98 -1.92 -4.81 16 25 Si 0.75 1.51 30.23 68.60 2.07 3.58 16 26 C -0.06 -0.22 8.20 22.50 0.18 -0.04 16 27 C -0.12 0.67 7.29 31.12 0.23 0.90 16 28 C -0.16 -0.40 9.65 22.37 0.22 -0.19 16 29 H 0.06 -0.26 7.66 -2.39 -0.02 -0.28 16 30 H 0.12 -0.70 8.14 -2.39 -0.02 -0.72 16 31 H 0.06 -0.27 7.66 -2.38 -0.02 -0.29 16 32 H 0.14 -0.23 6.30 -2.91 -0.02 -0.25 16 33 H 0.14 -0.56 8.06 -2.91 -0.02 -0.58 16 34 H 0.14 -0.54 6.64 -2.91 -0.02 -0.56 16 35 H 0.07 -0.12 8.14 -2.39 -0.02 -0.13 16 36 H 0.10 -0.34 6.29 -2.39 -0.02 -0.36 16 37 H 0.41 -3.65 6.73 -92.71 -0.62 -4.27 16 38 H 0.16 -1.76 6.39 -2.91 -0.02 -1.78 16 39 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 40 H 0.07 -0.30 7.52 -2.39 -0.02 -0.31 16 41 H 0.08 -0.76 8.08 -2.39 -0.02 -0.78 16 42 H 0.41 -4.38 9.06 -74.06 -0.67 -5.05 16 43 H 0.13 -0.32 7.82 -2.39 -0.02 -0.33 16 44 H 0.38 0.31 8.70 -74.06 -0.64 -0.34 16 45 H -0.29 -2.49 6.69 99.48 0.67 -1.82 16 46 H -0.29 -2.41 7.11 99.48 0.71 -1.70 16 47 H 0.13 0.76 4.43 -2.91 -0.01 0.75 16 48 H 0.10 -0.54 7.73 -2.39 -0.02 -0.56 16 49 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 50 H 0.13 0.05 8.05 -2.91 -0.02 0.03 16 Total: 0.00 -24.73 408.51 -0.84 -25.57 By element: Atomic # 1 Polarization: -20.55 SS G_CDS: -0.92 Total: -21.47 kcal Atomic # 6 Polarization: 3.96 SS G_CDS: 4.34 Total: 8.30 kcal Atomic # 7 Polarization: 1.74 SS G_CDS: -2.31 Total: -0.57 kcal Atomic # 8 Polarization: -11.38 SS G_CDS: -4.02 Total: -15.41 kcal Atomic # 14 Polarization: 1.51 SS G_CDS: 2.07 Total: 3.58 kcal Total: -24.73 -0.84 -25.57 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13287732.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.263 kcal (2) G-P(sol) polarization free energy of solvation -24.727 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.990 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.843 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.570 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.833 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds