Wall clock time and date at job start Sat Mar 6 2021 14:39:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35896 * 117.00092 * 2 1 4 4 C 1.38714 * 120.05475 * 180.02562 * 3 2 1 5 5 C 1.38172 * 119.94246 * 179.97438 * 4 3 2 6 6 C 1.50698 * 119.97076 * 180.02562 * 5 4 3 7 7 H 1.09003 * 112.84959 * 348.79508 * 6 5 4 8 8 C 1.53780 * 113.61954 * 119.99861 * 6 5 4 9 9 C 1.53778 * 87.08588 * 139.97614 * 8 6 5 10 10 H 1.08994 * 113.61674 * 219.93877 * 9 8 6 11 11 N 1.46506 * 113.61191 * 89.11379 * 9 8 6 12 12 C 1.34775 * 119.99694 * 155.00177 * 11 9 8 13 13 O 1.21553 * 120.00214 * 0.02562 * 12 11 9 14 14 C 1.47836 * 119.99999 * 180.02562 * 12 11 9 15 15 C 1.39523 * 120.55742 * 359.97438 * 14 12 11 16 16 N 1.31694 * 120.56847 * 180.02562 * 15 14 12 17 17 C 1.31933 * 121.87963 * 359.97438 * 16 15 14 18 18 C 1.38351 * 121.07487 * 359.97438 * 17 16 15 19 19 C 1.50700 * 120.34372 * 179.97438 * 18 17 16 20 20 O 1.42896 * 109.47532 * 245.04371 * 19 18 17 21 21 Si 1.86298 * 109.47308 * 5.04727 * 19 18 17 22 22 C 1.38357 * 119.30800 * 0.02562 * 18 17 16 23 23 C 1.53780 * 87.08052 * 334.56949 * 9 8 6 24 24 C 1.38246 * 120.05597 * 0.26730 * 5 4 3 25 25 C 1.38289 * 120.11234 * 359.45661 * 24 5 4 26 26 C 1.38123 * 120.05037 * 0.54631 * 25 24 5 27 27 H 1.08998 * 109.47307 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.47277 * 300.00375 * 1 2 3 29 29 H 1.09000 * 109.47392 * 60.00183 * 1 2 3 30 30 H 1.07991 * 120.03039 * 359.95301 * 4 3 2 31 31 H 1.09007 * 113.61392 * 25.42629 * 8 6 5 32 32 H 1.08997 * 113.68651 * 254.54038 * 8 6 5 33 33 H 0.96995 * 120.00136 * 335.00014 * 11 9 8 34 34 H 1.07998 * 119.72093 * 0.02739 * 15 14 12 35 35 H 1.08000 * 119.45770 * 179.97438 * 17 16 15 36 36 H 1.09010 * 109.46815 * 125.04772 * 19 18 17 37 37 H 0.96701 * 114.00352 * 180.02562 * 20 19 18 38 38 H 1.48500 * 110.00037 * 299.99799 * 21 19 18 39 39 H 1.48503 * 109.99979 * 61.31793 * 21 19 18 40 40 H 1.07994 * 120.85854 * 179.97438 * 22 18 17 41 41 H 1.09002 * 113.61889 * 139.97925 * 23 9 8 42 42 H 1.09000 * 113.61181 * 270.88117 * 23 9 8 43 43 H 1.07993 * 119.94209 * 179.70786 * 24 5 4 44 44 H 1.07996 * 119.97377 * 180.28926 * 25 24 5 45 45 H 1.08007 * 120.02691 * 179.70389 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4311 1.2847 -0.0005 5 6 4.0560 2.5171 -0.0011 6 6 5.5608 2.5981 -0.0022 7 1 6.0366 1.6369 0.1926 8 6 6.1372 3.3346 -1.2229 9 6 7.1513 3.9740 -0.2598 10 1 7.3479 5.0257 -0.4678 11 7 8.3765 3.1886 -0.0914 12 6 9.5211 3.7965 0.2784 13 8 9.5367 4.9963 0.4728 14 6 10.7576 3.0041 0.4478 15 6 10.7527 1.6262 0.2283 16 7 11.8540 0.9200 0.3796 17 6 12.9946 1.4766 0.7399 18 6 13.0824 2.8371 0.9753 19 6 14.3937 3.4555 1.3867 20 8 14.2794 3.9771 2.7122 21 14 15.7321 2.1604 1.3423 22 6 11.9536 3.6238 0.8302 23 6 6.1165 3.7476 0.8550 24 6 3.3020 3.6758 0.0045 25 6 1.9209 3.6048 -0.0007 26 6 1.2915 2.3753 -0.0001 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 4.0206 0.3799 -0.0002 31 1 5.4459 4.0506 -1.6675 32 1 6.5921 2.6722 -1.9594 33 1 8.3639 2.2311 -0.2461 34 1 9.8381 1.1345 -0.0682 35 1 13.8741 0.8600 0.8528 36 1 14.6462 4.2628 0.6992 37 1 15.0881 4.3915 3.0430 38 1 15.3997 1.0542 2.2756 39 1 15.8828 1.6328 -0.0376 40 1 11.9936 4.6882 1.0080 41 1 6.5545 3.4176 1.7970 42 1 5.4195 4.5765 0.9785 43 1 3.7923 4.6380 0.0089 44 1 1.3341 4.5114 -0.0010 45 1 0.2128 2.3204 0.0007 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_13287814.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:39:57 Heat of formation + Delta-G solvation = -4.097204 kcal Electronic energy + Delta-G solvation = -27969.402803 eV Core-core repulsion = 23920.020040 eV Total energy + Delta-G solvation = -4049.382764 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.146 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.05780 -41.45486 -40.66252 -39.49957 -37.93582 -37.86660 -34.80065 -33.87811 -33.10130 -32.03887 -30.90869 -28.31849 -27.34781 -26.82383 -26.71038 -25.27189 -23.79919 -23.56456 -22.40765 -21.74744 -20.37795 -19.10313 -18.75447 -18.61170 -18.12416 -17.84483 -17.25582 -17.01531 -16.76375 -16.68104 -16.28447 -16.15550 -15.79317 -15.59493 -15.36329 -14.96564 -14.78235 -14.49497 -14.38256 -14.28491 -14.21812 -14.04214 -13.83368 -13.60429 -13.33910 -13.25373 -12.73260 -12.64407 -12.37976 -12.17954 -12.16306 -11.71219 -11.65161 -11.36828 -11.34651 -11.05278 -10.73844 -10.52022 -10.29828 -10.15027 -9.74609 -9.13260 -5.11813 -0.61715 -0.04052 0.32965 0.50353 1.10301 1.51721 1.67882 1.80552 1.88501 2.30712 2.57118 2.74056 2.94961 3.16874 3.34778 3.46979 3.55727 3.59953 3.65092 3.67919 3.73138 3.81646 3.87091 3.99458 4.01447 4.12763 4.15276 4.16937 4.19825 4.33062 4.36565 4.49525 4.53005 4.57716 4.60891 4.65382 4.71394 4.80512 4.87791 4.88370 4.92866 5.03325 5.07295 5.24930 5.34568 5.43088 5.49827 5.66675 5.79440 6.29334 6.43977 6.47466 6.58033 7.03699 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.149 4.149 5 C -0.033 4.033 6 C -0.075 4.075 7 H 0.099 0.901 8 C -0.134 4.134 9 C 0.119 3.881 10 H 0.109 0.891 11 N -0.708 5.708 12 C 0.570 3.430 13 O -0.525 6.525 14 C -0.187 4.187 15 C 0.139 3.861 16 N -0.477 5.477 17 C 0.124 3.876 18 C -0.133 4.133 19 C -0.070 4.070 20 O -0.544 6.544 21 Si 0.686 3.314 22 C 0.015 3.985 23 C -0.143 4.143 24 C -0.154 4.154 25 C -0.076 4.076 26 C -0.212 4.212 27 H 0.101 0.899 28 H 0.056 0.944 29 H 0.056 0.944 30 H 0.129 0.871 31 H 0.101 0.899 32 H 0.078 0.922 33 H 0.401 0.599 34 H 0.163 0.837 35 H 0.155 0.845 36 H 0.081 0.919 37 H 0.387 0.613 38 H -0.246 1.246 39 H -0.250 1.250 40 H 0.154 0.846 41 H 0.076 0.924 42 H 0.099 0.901 43 H 0.125 0.875 44 H 0.126 0.874 45 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.993 0.400 -0.885 1.389 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.167 4.167 5 C -0.033 4.033 6 C -0.093 4.093 7 H 0.117 0.883 8 C -0.172 4.172 9 C 0.014 3.986 10 H 0.127 0.873 11 N -0.359 5.359 12 C 0.356 3.644 13 O -0.401 6.401 14 C -0.192 4.192 15 C -0.020 4.020 16 N -0.184 5.184 17 C -0.032 4.032 18 C -0.135 4.135 19 C -0.181 4.181 20 O -0.351 6.351 21 Si 0.586 3.414 22 C -0.011 4.011 23 C -0.181 4.181 24 C -0.173 4.173 25 C -0.094 4.094 26 C -0.231 4.231 27 H 0.120 0.880 28 H 0.075 0.925 29 H 0.075 0.925 30 H 0.147 0.853 31 H 0.120 0.880 32 H 0.097 0.903 33 H 0.237 0.763 34 H 0.180 0.820 35 H 0.172 0.828 36 H 0.099 0.901 37 H 0.235 0.765 38 H -0.170 1.170 39 H -0.174 1.174 40 H 0.172 0.828 41 H 0.095 0.905 42 H 0.117 0.883 43 H 0.143 0.857 44 H 0.144 0.856 45 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 0.637 -0.908 -1.135 1.587 hybrid contribution -0.936 0.652 -0.067 1.142 sum -0.299 -0.257 -1.201 1.264 Atomic orbital electron populations 1.23087 0.78076 1.04209 1.01444 1.86078 1.21633 1.26900 1.88574 1.19037 0.92323 0.84263 0.95963 1.20304 0.91335 0.98200 1.06909 1.19429 0.94635 0.92185 0.97021 1.21625 0.91000 0.99203 0.97472 0.88283 1.23430 0.97523 1.00033 0.96203 1.21905 0.82930 0.97085 0.96697 0.87289 1.45560 1.08613 1.11671 1.70080 1.17946 0.82724 0.87116 0.76603 1.90818 1.85331 1.14268 1.49684 1.21022 0.95398 0.95517 1.07293 1.23036 0.96748 0.89648 0.92563 1.67712 0.98716 1.39439 1.12550 1.22732 0.95899 0.91705 0.92913 1.20410 0.95917 0.94527 1.02629 1.24607 1.00187 1.05908 0.87380 1.86492 1.40999 1.79408 1.28210 0.94885 0.85475 0.78944 0.82062 1.21619 0.89451 1.01578 0.88459 1.23579 0.97901 0.98511 0.98129 1.20923 0.93647 0.98146 1.04539 1.20947 0.94581 0.97067 0.96840 1.21276 1.00175 0.92465 1.09196 0.88032 0.92545 0.92535 0.85295 0.88016 0.90292 0.76324 0.82003 0.82845 0.90081 0.76525 1.17015 1.17430 0.82795 0.90528 0.88290 0.85668 0.85636 0.85487 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.79 10.50 -19.41 -0.20 -0.99 16 3 C 0.13 0.31 6.69 -39.21 -0.26 0.04 16 4 C -0.15 -0.25 9.65 -39.43 -0.38 -0.63 16 5 C -0.03 -0.01 5.29 -104.64 -0.55 -0.57 16 6 C -0.07 0.11 3.86 -90.96 -0.35 -0.24 16 7 H 0.10 -0.22 8.09 -51.93 -0.42 -0.64 16 8 C -0.13 0.27 7.29 -25.92 -0.19 0.08 16 9 C 0.12 -0.09 4.32 -67.12 -0.29 -0.38 16 10 H 0.11 0.08 7.46 -51.93 -0.39 -0.31 16 11 N -0.71 0.48 5.22 -53.96 -0.28 0.20 16 12 C 0.57 1.33 7.78 -12.33 -0.10 1.24 16 13 O -0.52 -3.09 16.02 5.32 0.09 -3.00 16 14 C -0.19 -0.34 5.89 -104.82 -0.62 -0.96 16 15 C 0.14 0.11 10.71 -17.13 -0.18 -0.07 16 16 N -0.48 -1.35 10.35 -12.91 -0.13 -1.48 16 17 C 0.12 0.30 9.84 -17.47 -0.17 0.12 16 18 C -0.13 -0.24 5.39 -104.54 -0.56 -0.80 16 19 C -0.07 0.06 2.81 36.01 0.10 0.16 16 20 O -0.54 0.23 12.82 -35.23 -0.45 -0.22 16 21 Si 0.69 -1.45 29.88 -169.99 -5.08 -6.52 16 22 C 0.02 0.04 9.38 -38.87 -0.36 -0.33 16 23 C -0.14 0.13 7.25 -25.92 -0.19 -0.05 16 24 C -0.15 -0.04 8.62 -39.56 -0.34 -0.38 16 25 C -0.08 -0.04 10.04 -39.60 -0.40 -0.44 16 26 C -0.21 -0.25 9.04 -39.43 -0.36 -0.61 16 27 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 28 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 29 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 30 H 0.13 0.10 8.05 -52.49 -0.42 -0.32 16 31 H 0.10 -0.22 7.73 -51.93 -0.40 -0.62 16 32 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 33 H 0.40 -1.28 6.77 -40.82 -0.28 -1.56 16 34 H 0.16 -0.44 6.42 -52.49 -0.34 -0.78 16 35 H 0.15 0.20 4.87 -52.49 -0.26 -0.05 16 36 H 0.08 -0.21 7.96 -51.92 -0.41 -0.63 16 37 H 0.39 -2.13 8.74 45.56 0.40 -1.74 16 38 H -0.25 -0.22 7.05 56.52 0.40 0.18 16 39 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 40 H 0.15 0.36 7.74 -52.49 -0.41 -0.05 16 41 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 42 H 0.10 -0.13 6.29 -51.93 -0.33 -0.45 16 43 H 0.13 -0.17 6.63 -52.49 -0.35 -0.52 16 44 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 45 H 0.13 -0.07 6.30 -52.48 -0.33 -0.40 16 LS Contribution 373.46 15.07 5.63 5.63 Total: 0.00 -9.84 373.46 -10.26 -20.10 By element: Atomic # 1 Polarization: -5.25 SS G_CDS: -5.62 Total: -10.87 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -4.21 Total: -2.83 kcal Atomic # 7 Polarization: -0.87 SS G_CDS: -0.42 Total: -1.29 kcal Atomic # 8 Polarization: -3.64 SS G_CDS: -0.57 Total: -4.21 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.08 Total: -6.52 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -9.84 -10.26 -20.10 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13287814.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.003 kcal (2) G-P(sol) polarization free energy of solvation -9.837 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.166 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.263 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.101 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.097 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds