Wall clock time and date at job start Sat Mar 6 2021 14:40:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35905 * 116.99604 * 2 1 4 4 C 1.38706 * 120.05957 * 0.02562 * 3 2 1 5 5 C 1.38162 * 119.94729 * 180.02562 * 4 3 2 6 6 C 1.38247 * 120.05356 * 0.02562 * 5 4 3 7 7 C 1.38291 * 120.11155 * 359.97438 * 6 5 4 8 8 C 1.50704 * 119.97198 * 180.02562 * 7 6 5 9 9 H 1.08995 * 112.84779 * 191.20061 * 8 7 6 10 10 C 1.53785 * 113.61106 * 322.50185 * 8 7 6 11 11 C 1.53780 * 87.07787 * 139.98385 * 10 8 7 12 12 H 1.09004 * 113.68594 * 220.00345 * 11 10 8 13 13 N 1.46498 * 113.61442 * 89.11446 * 11 10 8 14 14 C 1.34786 * 119.99950 * 107.50247 * 13 11 10 15 15 O 1.21615 * 119.99872 * 359.97438 * 14 13 11 16 16 C 1.47376 * 120.00107 * 179.97438 * 14 13 11 17 17 C 1.36414 * 127.19284 * 179.70600 * 16 14 13 18 18 C 1.50701 * 125.80008 * 0.02562 * 17 16 14 19 19 O 1.33653 * 108.39709 * 179.83721 * 17 16 14 20 20 C 1.34221 * 110.90721 * 0.44894 * 19 17 16 21 21 C 1.50703 * 125.43726 * 179.72472 * 20 19 17 22 22 O 1.42898 * 109.47020 * 245.00135 * 21 20 19 23 23 Si 1.86294 * 109.47118 * 5.00307 * 21 20 19 24 24 C 1.34176 * 109.12266 * 359.72543 * 20 19 17 25 25 C 1.53773 * 113.61630 * 59.99768 * 8 7 6 26 26 C 1.38122 * 120.05277 * 359.76643 * 7 6 5 27 27 H 1.08999 * 109.47144 * 59.99795 * 1 2 3 28 28 H 1.08995 * 109.47253 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.47352 * 299.99771 * 1 2 3 30 30 H 1.08002 * 120.02873 * 0.02562 * 4 3 2 31 31 H 1.07998 * 119.97579 * 179.97438 * 5 4 3 32 32 H 1.08001 * 119.94666 * 179.97438 * 6 5 4 33 33 H 1.09009 * 113.60811 * 254.53120 * 10 8 7 34 34 H 1.08992 * 113.61658 * 25.43412 * 10 8 7 35 35 H 0.96996 * 120.00528 * 287.49622 * 13 11 10 36 36 H 1.09000 * 109.47435 * 89.99453 * 18 17 16 37 37 H 1.08996 * 109.46517 * 209.99872 * 18 17 16 38 38 H 1.09001 * 109.46874 * 329.99397 * 18 17 16 39 39 H 1.09000 * 109.46923 * 125.00255 * 21 20 19 40 40 H 0.96703 * 114.00140 * 60.00055 * 22 21 20 41 41 H 1.48502 * 110.00262 * 58.67954 * 23 21 20 42 42 H 1.48497 * 110.00115 * 179.97438 * 23 21 20 43 43 H 1.08003 * 127.01952 * 180.02562 * 24 20 19 44 44 H 1.09009 * 113.61533 * 334.57041 * 25 8 7 45 45 H 1.09003 * 113.61697 * 105.38559 * 25 8 7 46 46 H 1.08007 * 120.02335 * 180.27687 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 1.2916 2.3750 0.0005 5 6 1.9212 3.6048 0.0000 6 6 3.3018 3.6759 -0.0016 7 6 4.0561 2.5168 -0.0021 8 6 5.5610 2.5979 -0.0033 9 1 6.0365 1.6368 -0.1987 10 6 6.1152 3.7473 -0.8616 11 6 7.1518 3.9738 0.2516 12 1 7.3487 5.0257 0.4591 13 7 8.3767 3.1885 0.0815 14 6 9.5208 3.7963 -0.2902 15 8 9.5361 4.9967 -0.4849 16 6 10.7532 3.0064 -0.4608 17 6 11.9820 3.4657 -0.8350 18 6 12.3285 4.8974 -1.1532 19 8 12.8272 2.4309 -0.8675 20 6 12.2014 1.2907 -0.5362 21 6 12.8425 -0.0717 -0.4739 22 8 12.2652 -0.9159 -1.4719 23 14 14.6732 0.0890 -0.7797 24 6 10.9138 1.5576 -0.2694 25 6 6.1392 3.3346 1.2164 26 6 3.4315 1.2849 0.0038 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 0.2130 2.3200 0.0014 31 1 1.3343 4.5114 0.0000 32 1 3.7922 4.6381 -0.0024 33 1 6.5519 3.4170 -1.8042 34 1 5.4181 4.5761 -0.9842 35 1 8.3645 2.2310 0.2365 36 1 12.6521 5.4037 -0.2438 37 1 13.1327 4.9217 -1.8885 38 1 11.4512 5.4023 -1.5576 39 1 12.6756 -0.5071 0.5113 40 1 12.3760 -0.5894 -2.3754 41 1 15.2801 0.9901 0.2327 42 1 15.3173 -1.2477 -0.7203 43 1 10.1512 0.8521 0.0261 44 1 5.4484 4.0506 1.6618 45 1 6.5938 2.6712 1.9521 46 1 4.0211 0.3800 0.0079 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_13308374.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:00 Heat of formation + Delta-G solvation = -34.050194 kcal Electronic energy + Delta-G solvation = -28973.345601 eV Core-core repulsion = 24797.633838 eV Total energy + Delta-G solvation = -4175.711763 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.150 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -43.73675 -41.62049 -40.73263 -39.48084 -38.09657 -37.82868 -34.63558 -33.90449 -33.07845 -32.07106 -30.92915 -29.40985 -28.30265 -26.76430 -26.54332 -25.55633 -24.21463 -23.54393 -22.61005 -22.00052 -20.77663 -20.12864 -19.00320 -18.71125 -17.94084 -17.63622 -17.24203 -17.01797 -16.82356 -16.74677 -16.66690 -16.03184 -15.95969 -15.84124 -15.53761 -15.24462 -14.69508 -14.47013 -14.33530 -14.23777 -14.13473 -14.07097 -13.90408 -13.85014 -13.55318 -13.29884 -13.21194 -12.91812 -12.82509 -12.70124 -12.33652 -12.15837 -12.13347 -11.67312 -11.61185 -11.29516 -10.99034 -10.87289 -10.64113 -10.06681 -9.72416 -9.55952 -9.11465 -5.08388 0.30670 0.35314 0.52172 0.84258 1.09451 1.40873 1.72833 1.88566 2.13916 2.32195 2.35353 2.76298 3.14761 3.36955 3.40922 3.64504 3.68911 3.76585 3.77296 3.85171 3.91405 4.02974 4.12553 4.14764 4.18717 4.20847 4.21481 4.35511 4.40817 4.51331 4.55354 4.56381 4.60680 4.61630 4.66962 4.70057 4.75822 4.85351 4.92323 4.97800 5.08875 5.09623 5.14696 5.21928 5.36359 5.50160 5.55949 5.70216 5.81410 5.91988 6.32921 6.45525 6.50670 7.24864 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.213 4.213 5 C -0.076 4.076 6 C -0.154 4.154 7 C -0.032 4.032 8 C -0.074 4.074 9 H 0.098 0.902 10 C -0.142 4.142 11 C 0.121 3.879 12 H 0.108 0.892 13 N -0.707 5.707 14 C 0.596 3.404 15 O -0.537 6.537 16 C -0.254 4.254 17 C 0.096 3.904 18 C -0.087 4.087 19 O -0.168 6.168 20 C -0.056 4.056 21 C -0.028 4.028 22 O -0.530 6.530 23 Si 0.703 3.297 24 C -0.148 4.148 25 C -0.135 4.135 26 C -0.149 4.149 27 H 0.056 0.944 28 H 0.101 0.899 29 H 0.056 0.944 30 H 0.127 0.873 31 H 0.126 0.874 32 H 0.125 0.875 33 H 0.075 0.925 34 H 0.097 0.903 35 H 0.401 0.599 36 H 0.092 0.908 37 H 0.082 0.918 38 H 0.111 0.889 39 H 0.133 0.867 40 H 0.384 0.616 41 H -0.253 1.253 42 H -0.247 1.247 43 H 0.158 0.842 44 H 0.100 0.900 45 H 0.077 0.923 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.902 -0.461 -1.179 1.555 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.232 4.232 5 C -0.095 4.095 6 C -0.172 4.172 7 C -0.032 4.032 8 C -0.093 4.093 9 H 0.116 0.884 10 C -0.181 4.181 11 C 0.016 3.984 12 H 0.125 0.875 13 N -0.358 5.358 14 C 0.385 3.615 15 O -0.416 6.416 16 C -0.258 4.258 17 C 0.043 3.957 18 C -0.143 4.143 19 O -0.065 6.065 20 C -0.104 4.104 21 C -0.138 4.138 22 O -0.336 6.336 23 Si 0.603 3.397 24 C -0.168 4.168 25 C -0.173 4.173 26 C -0.168 4.168 27 H 0.075 0.925 28 H 0.119 0.881 29 H 0.074 0.926 30 H 0.145 0.855 31 H 0.144 0.856 32 H 0.143 0.857 33 H 0.094 0.906 34 H 0.116 0.884 35 H 0.236 0.764 36 H 0.110 0.890 37 H 0.101 0.899 38 H 0.130 0.870 39 H 0.150 0.850 40 H 0.232 0.768 41 H -0.178 1.178 42 H -0.171 1.171 43 H 0.175 0.825 44 H 0.118 0.882 45 H 0.096 0.904 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.140 -0.279 -0.536 0.621 hybrid contribution -1.243 -0.535 0.560 1.465 sum -1.102 -0.815 0.024 1.371 Atomic orbital electron populations 1.23082 0.78101 1.04188 1.01436 1.86081 1.21611 1.26907 1.88589 1.19035 0.92318 0.84257 0.95989 1.21267 1.00154 0.92466 1.09272 1.20945 0.94583 0.97054 0.96871 1.20925 0.93635 0.98152 1.04534 1.19449 0.94699 0.92167 0.96890 1.21614 0.90872 0.99222 0.97549 0.88351 1.23570 0.97959 0.98389 0.98173 1.21851 0.83125 0.97056 0.96410 0.87450 1.45443 1.08468 1.11612 1.70233 1.17151 0.82025 0.86434 0.75895 1.90778 1.85520 1.14232 1.51051 1.21099 0.94944 0.93954 1.15817 1.22924 0.87025 0.89883 0.95870 1.20707 1.04954 0.85067 1.03551 1.83674 1.39339 1.14970 1.68499 1.22610 0.92926 0.87678 1.07217 1.24422 1.10042 0.83516 0.95825 1.86562 1.81207 1.47367 1.18485 0.94174 0.73002 0.81691 0.90812 1.22580 0.96487 0.93776 1.03928 1.23427 0.97629 1.00002 0.96220 1.20306 0.91321 0.98218 1.06920 0.92548 0.88051 0.92550 0.85503 0.85649 0.85669 0.90598 0.88432 0.76381 0.89002 0.89873 0.87047 0.84973 0.76776 1.17754 1.17077 0.82488 0.88152 0.90437 0.85319 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.81 10.50 -19.44 -0.20 -1.02 16 3 C 0.13 0.32 6.69 -39.22 -0.26 0.06 16 4 C -0.21 -0.27 9.04 -39.44 -0.36 -0.63 16 5 C -0.08 -0.05 10.04 -39.61 -0.40 -0.44 16 6 C -0.15 -0.06 8.61 -39.56 -0.34 -0.40 16 7 C -0.03 -0.02 5.29 -104.64 -0.55 -0.58 16 8 C -0.07 0.08 3.86 -90.96 -0.35 -0.28 16 9 H 0.10 -0.16 8.09 -51.93 -0.42 -0.58 16 10 C -0.14 0.09 7.25 -25.92 -0.19 -0.09 16 11 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 12 H 0.11 0.12 7.46 -51.93 -0.39 -0.27 16 13 N -0.71 -0.05 5.26 -54.11 -0.28 -0.33 16 14 C 0.60 1.58 7.81 -12.54 -0.10 1.48 16 15 O -0.54 -2.87 14.45 5.26 0.08 -2.80 16 16 C -0.25 -0.46 6.31 -103.28 -0.65 -1.12 16 17 C 0.10 0.14 7.37 -34.97 -0.26 -0.11 16 18 C -0.09 0.02 9.89 36.01 0.36 0.38 16 19 O -0.17 -0.17 8.90 7.64 0.07 -0.10 16 20 C -0.06 -0.02 6.18 -35.74 -0.22 -0.24 16 21 C -0.03 0.03 2.97 36.01 0.11 0.14 16 22 O -0.53 0.55 12.88 -35.23 -0.45 0.09 16 23 Si 0.70 -0.93 32.09 -169.99 -5.46 -6.38 16 24 C -0.15 -0.05 10.48 -37.45 -0.39 -0.45 16 25 C -0.13 0.20 7.29 -25.93 -0.19 0.01 16 26 C -0.15 -0.28 9.65 -39.43 -0.38 -0.66 16 27 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 28 H 0.10 -0.25 8.14 -51.93 -0.42 -0.68 16 29 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 30 H 0.13 -0.06 6.30 -52.49 -0.33 -0.39 16 31 H 0.13 -0.16 8.06 -52.49 -0.42 -0.59 16 32 H 0.13 -0.15 6.65 -52.49 -0.35 -0.50 16 33 H 0.08 0.02 8.14 -51.92 -0.42 -0.40 16 34 H 0.10 -0.10 6.31 -51.93 -0.33 -0.43 16 35 H 0.40 -0.76 7.87 -40.82 -0.32 -1.08 16 36 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 38 H 0.11 0.10 6.49 -51.93 -0.34 -0.24 16 39 H 0.13 -0.21 7.96 -51.93 -0.41 -0.62 16 40 H 0.38 -1.78 8.70 45.56 0.40 -1.39 16 41 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 42 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 43 H 0.16 -0.25 7.74 -52.48 -0.41 -0.65 16 44 H 0.10 -0.17 7.72 -51.92 -0.40 -0.57 16 45 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 46 H 0.13 0.13 8.05 -52.48 -0.42 -0.29 16 LS Contribution 384.60 15.07 5.80 5.80 Total: 0.00 -8.08 384.60 -10.18 -18.27 By element: Atomic # 1 Polarization: -5.00 SS G_CDS: -6.25 Total: -11.25 kcal Atomic # 6 Polarization: 1.19 SS G_CDS: -3.48 Total: -2.28 kcal Atomic # 7 Polarization: -0.05 SS G_CDS: -0.28 Total: -0.33 kcal Atomic # 8 Polarization: -3.31 SS G_CDS: -0.51 Total: -3.82 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.46 Total: -6.38 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -8.08 -10.18 -18.27 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13308374.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.784 kcal (2) G-P(sol) polarization free energy of solvation -8.083 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.867 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.266 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.050 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds