Wall clock time and date at job start Sat Mar 6 2021 14:40:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35904 * 116.99628 * 2 1 4 4 C 1.38713 * 120.05614 * 0.02562 * 3 2 1 5 5 C 1.38166 * 119.94316 * 179.97438 * 4 3 2 6 6 C 1.38250 * 120.05469 * 359.97438 * 5 4 3 7 7 C 1.38287 * 120.11301 * 359.97438 * 6 5 4 8 8 C 1.50694 * 119.97334 * 180.02562 * 7 6 5 9 9 H 1.09001 * 112.85020 * 168.80282 * 8 7 6 10 10 C 1.53779 * 113.61600 * 300.00048 * 8 7 6 11 11 C 1.53785 * 87.08257 * 139.98254 * 10 8 7 12 12 H 1.08998 * 113.60984 * 219.93830 * 11 10 8 13 13 N 1.46489 * 113.61726 * 89.11692 * 11 10 8 14 14 C 1.34777 * 120.00180 * 154.99905 * 13 11 10 15 15 O 1.21592 * 119.99722 * 0.02562 * 14 13 11 16 16 C 1.47538 * 120.00170 * 179.97438 * 14 13 11 17 17 C 1.40141 * 120.19061 * 179.72417 * 16 14 13 18 18 O 1.35655 * 120.15001 * 359.97438 * 17 16 14 19 19 C 1.38702 * 119.69808 * 179.77261 * 17 16 14 20 20 C 1.50702 * 119.95998 * 180.27294 * 19 17 16 21 21 O 1.42898 * 109.46871 * 285.23481 * 20 19 17 22 22 Si 1.86300 * 109.47034 * 165.23388 * 20 19 17 23 23 C 1.38061 * 120.08393 * 0.50943 * 19 17 16 24 24 C 1.38549 * 120.38791 * 359.73959 * 23 19 17 25 25 C 1.50702 * 119.84508 * 179.97438 * 24 23 19 26 26 C 1.37786 * 120.30378 * 0.02562 * 24 23 19 27 27 C 1.53781 * 113.61474 * 37.49889 * 8 7 6 28 28 C 1.38127 * 120.05507 * 359.76379 * 7 6 5 29 29 H 1.09002 * 109.47382 * 59.99787 * 1 2 3 30 30 H 1.09001 * 109.46938 * 299.99774 * 1 2 3 31 31 H 1.09004 * 109.46926 * 179.97438 * 1 2 3 32 32 H 1.07995 * 120.02940 * 0.02562 * 4 3 2 33 33 H 1.07998 * 119.97388 * 180.02562 * 5 4 3 34 34 H 1.08005 * 119.94140 * 179.97438 * 6 5 4 35 35 H 1.09000 * 113.61534 * 254.52891 * 10 8 7 36 36 H 1.08999 * 113.61451 * 25.34497 * 10 8 7 37 37 H 0.96998 * 119.99950 * 334.99893 * 13 11 10 38 38 H 0.96708 * 113.99521 * 90.00215 * 18 17 16 39 39 H 1.09003 * 109.46555 * 45.23307 * 20 19 17 40 40 H 0.96708 * 113.99569 * 179.97438 * 21 20 19 41 41 H 1.48503 * 110.00213 * 298.68051 * 22 20 19 42 42 H 1.48498 * 110.00221 * 60.00500 * 22 20 19 43 43 H 1.07999 * 119.80252 * 179.77256 * 23 19 17 44 44 H 1.09004 * 109.46687 * 270.02288 * 25 24 23 45 45 H 1.08999 * 109.47312 * 30.02278 * 25 24 23 46 46 H 1.09004 * 109.46912 * 150.02623 * 25 24 23 47 47 H 1.07994 * 120.04718 * 179.97438 * 26 24 23 48 48 H 1.09002 * 113.61314 * 334.56071 * 27 8 7 49 49 H 1.08998 * 113.62028 * 105.46810 * 27 8 7 50 50 H 1.07994 * 120.02736 * 180.27657 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 1.2915 2.3750 0.0005 5 6 1.9211 3.6049 0.0011 6 6 3.3018 3.6759 0.0016 7 6 4.0562 2.5169 0.0021 8 6 5.5609 2.5980 0.0033 9 1 6.0364 1.6368 0.1987 10 6 6.1391 3.3347 -1.2164 11 6 7.1518 3.9739 -0.2516 12 1 7.3486 5.0257 -0.4593 13 7 8.3767 3.1887 -0.0816 14 6 9.5207 3.7965 0.2901 15 8 9.5360 4.9967 0.4847 16 6 10.7542 3.0055 0.4619 17 6 11.9474 3.6344 0.8426 18 8 11.9739 4.9740 1.0546 19 6 13.0999 2.8802 1.0058 20 6 14.3848 3.5495 1.4211 21 8 14.9284 4.2669 0.3112 22 14 15.6041 2.2580 1.9833 23 6 13.0728 1.5179 0.7835 24 6 11.8964 0.8933 0.4019 25 6 11.8808 -0.5944 0.1620 26 6 10.7410 1.6263 0.2399 27 6 6.1152 3.7474 0.8615 28 6 3.4315 1.2849 0.0071 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 0.2130 2.3200 0.0014 33 1 1.3342 4.5115 0.0019 34 1 3.7921 4.6383 0.0016 35 1 6.5950 2.6714 -1.9514 36 1 5.4479 4.0496 -1.6628 37 1 8.3644 2.2312 -0.2365 38 1 11.7792 5.2319 1.9661 39 1 14.1858 4.2419 2.2390 40 1 15.7579 4.7240 0.5067 41 1 15.0639 1.5262 3.1571 42 1 15.8838 1.3077 0.8769 43 1 13.9738 0.9356 0.9083 44 1 12.1145 -0.7962 -0.8834 45 1 12.6241 -1.0731 0.7995 46 1 10.8924 -0.9898 0.3962 47 1 9.8265 1.1353 -0.0581 48 1 5.4180 4.5762 0.9841 49 1 6.5519 3.4173 1.8041 50 1 4.0211 0.3801 0.0120 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_13422088.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:12 Heat of formation + Delta-G solvation = -60.093249 kcal Electronic energy + Delta-G solvation = -32652.381613 eV Core-core repulsion = 28191.776778 eV Total energy + Delta-G solvation = -4460.604834 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -41.91585 -41.35527 -40.54398 -39.31690 -38.06037 -37.82249 -37.47048 -34.59453 -33.23356 -32.84085 -31.97736 -30.86508 -28.31905 -27.69878 -26.81503 -26.78039 -26.40299 -24.84933 -23.56820 -22.39326 -21.83201 -21.56090 -20.31627 -19.46452 -18.81492 -18.41931 -18.22700 -17.61968 -17.24827 -16.97664 -16.73422 -16.68210 -16.64742 -16.08321 -15.92066 -15.65670 -15.50137 -15.15526 -14.91220 -14.83991 -14.65161 -14.46577 -14.30844 -14.25151 -14.04571 -13.72924 -13.57146 -13.32790 -13.25364 -13.20411 -12.99411 -12.73403 -12.71046 -12.43405 -12.35511 -12.14224 -11.97981 -11.70861 -11.64967 -11.62664 -11.29702 -10.76871 -10.29704 -10.20985 -10.02103 -9.74032 -9.55264 -9.13078 -5.04893 -0.36605 0.02997 0.33376 0.50564 1.19711 1.55823 1.74978 1.87109 2.02952 2.30422 2.55076 2.74620 3.12405 3.29201 3.38550 3.51875 3.55293 3.63624 3.69226 3.80299 3.83261 3.89242 3.96814 4.00412 4.05599 4.13350 4.17051 4.19405 4.21641 4.33131 4.33832 4.49667 4.51085 4.54452 4.55247 4.58980 4.63181 4.66984 4.68900 4.79574 4.88998 4.90472 4.92600 4.95127 5.06584 5.08517 5.15503 5.26857 5.34657 5.48165 5.51796 5.55285 5.68420 5.79633 6.43748 6.45007 6.64780 6.75619 7.23055 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.213 4.213 5 C -0.076 4.076 6 C -0.154 4.154 7 C -0.032 4.032 8 C -0.074 4.074 9 H 0.098 0.902 10 C -0.135 4.135 11 C 0.121 3.879 12 H 0.108 0.892 13 N -0.712 5.712 14 C 0.564 3.436 15 O -0.514 6.514 16 C -0.164 4.164 17 C 0.194 3.806 18 O -0.465 6.465 19 C -0.108 4.108 20 C -0.063 4.063 21 O -0.538 6.538 22 Si 0.684 3.316 23 C -0.081 4.081 24 C -0.097 4.097 25 C -0.117 4.117 26 C -0.067 4.067 27 C -0.142 4.142 28 C -0.149 4.149 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.101 0.899 32 H 0.127 0.873 33 H 0.126 0.874 34 H 0.126 0.874 35 H 0.077 0.923 36 H 0.101 0.899 37 H 0.399 0.601 38 H 0.393 0.607 39 H 0.072 0.928 40 H 0.381 0.619 41 H -0.253 1.253 42 H -0.249 1.249 43 H 0.130 0.870 44 H 0.077 0.923 45 H 0.069 0.931 46 H 0.073 0.927 47 H 0.133 0.867 48 H 0.098 0.902 49 H 0.075 0.925 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.001 -2.962 2.209 3.695 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.231 4.231 5 C -0.094 4.094 6 C -0.172 4.172 7 C -0.032 4.032 8 C -0.092 4.092 9 H 0.116 0.884 10 C -0.173 4.173 11 C 0.015 3.985 12 H 0.126 0.874 13 N -0.364 5.364 14 C 0.351 3.649 15 O -0.390 6.390 16 C -0.167 4.167 17 C 0.146 3.854 18 O -0.275 6.275 19 C -0.109 4.109 20 C -0.173 4.173 21 O -0.344 6.344 22 Si 0.585 3.415 23 C -0.099 4.099 24 C -0.097 4.097 25 C -0.173 4.173 26 C -0.085 4.085 27 C -0.181 4.181 28 C -0.168 4.168 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.120 0.880 32 H 0.145 0.855 33 H 0.144 0.856 34 H 0.143 0.857 35 H 0.096 0.904 36 H 0.119 0.881 37 H 0.235 0.765 38 H 0.251 0.749 39 H 0.090 0.910 40 H 0.229 0.771 41 H -0.178 1.178 42 H -0.174 1.174 43 H 0.147 0.853 44 H 0.095 0.905 45 H 0.088 0.912 46 H 0.092 0.908 47 H 0.150 0.850 48 H 0.116 0.884 49 H 0.093 0.907 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.169 -3.329 1.607 3.701 hybrid contribution -1.108 -0.269 0.290 1.176 sum -1.277 -3.598 1.897 4.264 Atomic orbital electron populations 1.23088 0.78083 1.04195 1.01451 1.86078 1.21628 1.26911 1.88595 1.19036 0.92316 0.84256 0.95997 1.21272 1.00165 0.92464 1.09242 1.20950 0.94581 0.97067 0.96828 1.20930 0.93645 0.98166 1.04491 1.19442 0.94677 0.92179 0.96933 1.21612 0.90898 0.99155 0.97583 0.88400 1.23430 0.97616 1.00017 0.96199 1.21852 0.83069 0.97148 0.96404 0.87429 1.45575 1.08642 1.11531 1.70651 1.17970 0.82654 0.87245 0.77004 1.90835 1.85106 1.13947 1.49068 1.20366 0.93919 0.94025 1.08430 1.18182 0.89743 0.83474 0.93953 1.84813 1.92382 1.16507 1.33839 1.19728 0.94599 0.93190 1.03406 1.24520 0.97260 1.02952 0.92618 1.86555 1.43274 1.69683 1.34901 0.95122 0.86901 0.79321 0.80144 1.21016 0.97999 0.93583 0.97296 1.19768 0.92643 0.96956 1.00338 1.20838 1.03437 0.90210 1.02835 1.21115 0.98280 0.91974 0.97160 1.23572 0.97972 0.98418 0.98112 1.20297 0.91315 0.98179 1.06978 0.92537 0.92542 0.88041 0.85490 0.85632 0.85658 0.90408 0.88095 0.76548 0.74850 0.90971 0.77108 1.17774 1.17385 0.85310 0.90467 0.91208 0.90823 0.84950 0.88400 0.90657 0.85343 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.77 10.50 -19.44 -0.20 -0.98 16 3 C 0.13 0.31 6.69 -39.21 -0.26 0.04 16 4 C -0.21 -0.26 9.04 -39.43 -0.36 -0.62 16 5 C -0.08 -0.05 10.04 -39.60 -0.40 -0.44 16 6 C -0.15 -0.07 8.61 -39.56 -0.34 -0.41 16 7 C -0.03 -0.02 5.29 -104.65 -0.55 -0.57 16 8 C -0.07 0.08 3.86 -90.96 -0.35 -0.27 16 9 H 0.10 -0.19 8.09 -51.93 -0.42 -0.61 16 10 C -0.13 0.18 7.29 -25.92 -0.19 0.00 16 11 C 0.12 0.00 4.32 -67.12 -0.29 -0.29 16 12 H 0.11 0.19 7.46 -51.93 -0.39 -0.20 16 13 N -0.71 -0.18 5.21 -54.06 -0.28 -0.46 16 14 C 0.56 1.95 7.76 -12.47 -0.10 1.86 16 15 O -0.51 -3.54 14.76 -16.59 -0.24 -3.79 16 16 C -0.16 -0.45 5.89 -104.84 -0.62 -1.06 16 17 C 0.19 0.72 6.69 -38.70 -0.26 0.46 16 18 O -0.46 -1.91 10.91 -40.54 -0.44 -2.36 16 19 C -0.11 -0.30 5.30 -104.51 -0.55 -0.85 16 20 C -0.06 -0.04 2.36 36.01 0.09 0.05 16 21 O -0.54 -0.89 12.86 -35.23 -0.45 -1.35 16 22 Si 0.68 -0.83 30.19 -169.99 -5.13 -5.96 16 23 C -0.08 -0.15 8.30 -39.53 -0.33 -0.48 16 24 C -0.10 -0.06 5.87 -104.67 -0.61 -0.68 16 25 C -0.12 0.20 10.00 36.01 0.36 0.56 16 26 C -0.07 -0.02 9.18 -39.20 -0.36 -0.38 16 27 C -0.14 0.09 7.25 -25.92 -0.19 -0.10 16 28 C -0.15 -0.26 9.65 -39.43 -0.38 -0.64 16 29 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 30 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 31 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 32 H 0.13 -0.06 6.30 -52.49 -0.33 -0.39 16 33 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 34 H 0.13 -0.14 6.65 -52.48 -0.35 -0.48 16 35 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.10 -0.15 7.72 -51.93 -0.40 -0.55 16 37 H 0.40 -0.89 6.73 -40.82 -0.27 -1.17 16 38 H 0.39 0.06 9.06 45.56 0.41 0.47 16 39 H 0.07 -0.08 7.83 -51.93 -0.41 -0.48 16 40 H 0.38 -1.35 8.74 45.56 0.40 -0.95 16 41 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 42 H -0.25 -0.36 6.74 56.52 0.38 0.02 16 43 H 0.13 0.15 4.87 -52.49 -0.26 -0.11 16 44 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 45 H 0.07 -0.14 8.08 -51.93 -0.42 -0.56 16 46 H 0.07 -0.22 8.08 -51.93 -0.42 -0.64 16 47 H 0.13 -0.37 6.40 -52.49 -0.34 -0.70 16 48 H 0.10 -0.09 6.31 -51.93 -0.33 -0.42 16 49 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 50 H 0.13 0.10 8.05 -52.49 -0.42 -0.33 16 LS Contribution 407.83 15.07 6.15 6.15 Total: 0.00 -11.01 407.83 -11.38 -22.39 By element: Atomic # 1 Polarization: -4.71 SS G_CDS: -6.07 Total: -10.77 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -4.70 Total: -2.87 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.28 Total: -0.46 kcal Atomic # 8 Polarization: -7.12 SS G_CDS: -1.34 Total: -8.47 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.13 Total: -5.96 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -11.01 -11.38 -22.39 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13422088.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.706 kcal (2) G-P(sol) polarization free energy of solvation -11.006 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.712 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.381 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.387 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.093 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds