Wall clock time and date at job start Sat Mar 6 2021 14:40:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35904 * 116.99628 * 2 1 4 4 C 1.38713 * 120.05614 * 0.02562 * 3 2 1 5 5 C 1.38166 * 119.94316 * 179.97438 * 4 3 2 6 6 C 1.38250 * 120.05469 * 359.97438 * 5 4 3 7 7 C 1.38287 * 120.11301 * 359.97438 * 6 5 4 8 8 C 1.50694 * 119.97334 * 180.02562 * 7 6 5 9 9 H 1.09001 * 112.85020 * 168.80282 * 8 7 6 10 10 C 1.53779 * 113.61600 * 300.00048 * 8 7 6 11 11 C 1.53785 * 87.08257 * 139.98254 * 10 8 7 12 12 H 1.08998 * 113.60984 * 219.93830 * 11 10 8 13 13 N 1.46489 * 113.61726 * 89.11692 * 11 10 8 14 14 C 1.34777 * 120.00180 * 154.99905 * 13 11 10 15 15 O 1.21592 * 119.99722 * 0.02562 * 14 13 11 16 16 C 1.47538 * 120.00170 * 179.97438 * 14 13 11 17 17 C 1.40141 * 120.19061 * 179.72417 * 16 14 13 18 18 O 1.35655 * 120.15001 * 359.97438 * 17 16 14 19 19 C 1.38702 * 119.69808 * 179.77261 * 17 16 14 20 20 C 1.50702 * 119.95998 * 180.27294 * 19 17 16 21 21 O 1.42898 * 109.46871 * 285.23481 * 20 19 17 22 22 Si 1.86300 * 109.47034 * 165.23388 * 20 19 17 23 23 C 1.38061 * 120.08393 * 0.50943 * 19 17 16 24 24 C 1.38549 * 120.38791 * 359.73959 * 23 19 17 25 25 C 1.50702 * 119.84508 * 179.97438 * 24 23 19 26 26 C 1.37786 * 120.30378 * 0.02562 * 24 23 19 27 27 C 1.53781 * 113.61474 * 37.49889 * 8 7 6 28 28 C 1.38127 * 120.05507 * 359.76379 * 7 6 5 29 29 H 1.09002 * 109.47382 * 59.99787 * 1 2 3 30 30 H 1.09001 * 109.46938 * 299.99774 * 1 2 3 31 31 H 1.09004 * 109.46926 * 179.97438 * 1 2 3 32 32 H 1.07995 * 120.02940 * 0.02562 * 4 3 2 33 33 H 1.07998 * 119.97388 * 180.02562 * 5 4 3 34 34 H 1.08005 * 119.94140 * 179.97438 * 6 5 4 35 35 H 1.09000 * 113.61534 * 254.52891 * 10 8 7 36 36 H 1.08999 * 113.61451 * 25.34497 * 10 8 7 37 37 H 0.96998 * 119.99950 * 334.99893 * 13 11 10 38 38 H 0.96708 * 113.99521 * 90.00215 * 18 17 16 39 39 H 1.09003 * 109.46555 * 45.23307 * 20 19 17 40 40 H 0.96708 * 113.99569 * 179.97438 * 21 20 19 41 41 H 1.48503 * 110.00213 * 298.68051 * 22 20 19 42 42 H 1.48498 * 110.00221 * 60.00500 * 22 20 19 43 43 H 1.07999 * 119.80252 * 179.77256 * 23 19 17 44 44 H 1.09004 * 109.46687 * 270.02288 * 25 24 23 45 45 H 1.08999 * 109.47312 * 30.02278 * 25 24 23 46 46 H 1.09004 * 109.46912 * 150.02623 * 25 24 23 47 47 H 1.07994 * 120.04718 * 179.97438 * 26 24 23 48 48 H 1.09002 * 113.61314 * 334.56071 * 27 8 7 49 49 H 1.08998 * 113.62028 * 105.46810 * 27 8 7 50 50 H 1.07994 * 120.02736 * 180.27657 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 1.2915 2.3750 0.0005 5 6 1.9211 3.6049 0.0011 6 6 3.3018 3.6759 0.0016 7 6 4.0562 2.5169 0.0021 8 6 5.5609 2.5980 0.0033 9 1 6.0364 1.6368 0.1987 10 6 6.1391 3.3347 -1.2164 11 6 7.1518 3.9739 -0.2516 12 1 7.3486 5.0257 -0.4593 13 7 8.3767 3.1887 -0.0816 14 6 9.5207 3.7965 0.2901 15 8 9.5360 4.9967 0.4847 16 6 10.7542 3.0055 0.4619 17 6 11.9474 3.6344 0.8426 18 8 11.9739 4.9740 1.0546 19 6 13.0999 2.8802 1.0058 20 6 14.3848 3.5495 1.4211 21 8 14.9284 4.2669 0.3112 22 14 15.6041 2.2580 1.9833 23 6 13.0728 1.5179 0.7835 24 6 11.8964 0.8933 0.4019 25 6 11.8808 -0.5944 0.1620 26 6 10.7410 1.6263 0.2399 27 6 6.1152 3.7474 0.8615 28 6 3.4315 1.2849 0.0071 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 0.2130 2.3200 0.0014 33 1 1.3342 4.5115 0.0019 34 1 3.7921 4.6383 0.0016 35 1 6.5950 2.6714 -1.9514 36 1 5.4479 4.0496 -1.6628 37 1 8.3644 2.2312 -0.2365 38 1 11.7792 5.2319 1.9661 39 1 14.1858 4.2419 2.2390 40 1 15.7579 4.7240 0.5067 41 1 15.0639 1.5262 3.1571 42 1 15.8838 1.3077 0.8769 43 1 13.9738 0.9356 0.9083 44 1 12.1145 -0.7962 -0.8834 45 1 12.6241 -1.0731 0.7995 46 1 10.8924 -0.9898 0.3962 47 1 9.8265 1.1353 -0.0581 48 1 5.4180 4.5762 0.9841 49 1 6.5519 3.4173 1.8041 50 1 4.0211 0.3801 0.0120 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_13422088.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:11 Heat of formation + Delta-G solvation = -60.633728 kcal Electronic energy + Delta-G solvation = -32652.405050 eV Core-core repulsion = 28191.776778 eV Total energy + Delta-G solvation = -4460.628271 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -42.01733 -41.39447 -40.59914 -39.45384 -38.18877 -37.86398 -37.55386 -34.75466 -33.27493 -32.90058 -32.00201 -30.88433 -28.25762 -27.66938 -26.86345 -26.72918 -26.44527 -24.93382 -23.59035 -22.41727 -21.88723 -21.69978 -20.35034 -19.60015 -18.84447 -18.46004 -18.33817 -17.70588 -17.25376 -16.97791 -16.87935 -16.71451 -16.68454 -16.16464 -16.02522 -15.72750 -15.53389 -15.23052 -14.95872 -14.91604 -14.59802 -14.46125 -14.31421 -14.29515 -14.04456 -13.74208 -13.52166 -13.28000 -13.23562 -13.14091 -13.02693 -12.74806 -12.69812 -12.49972 -12.31636 -12.13135 -12.05273 -11.81304 -11.65938 -11.60760 -11.29180 -10.99975 -10.38300 -10.28893 -10.09814 -9.76717 -9.63938 -9.17322 -4.96906 -0.50115 -0.05522 0.30668 0.45998 1.24071 1.56610 1.63606 1.89059 1.94018 2.33529 2.42819 2.71718 3.03211 3.28409 3.40710 3.44667 3.55631 3.66394 3.70959 3.81818 3.85870 3.93214 3.95924 4.03260 4.07749 4.16719 4.21018 4.26197 4.33360 4.36728 4.39008 4.49828 4.52619 4.59324 4.62825 4.66833 4.69642 4.71982 4.75391 4.80314 4.84619 4.94422 4.98542 5.03652 5.07074 5.07970 5.11630 5.25024 5.32408 5.45310 5.49927 5.52565 5.67882 5.80476 6.38000 6.41946 6.65221 6.87743 7.07635 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.110 3.890 4 C -0.222 4.222 5 C -0.084 4.084 6 C -0.161 4.161 7 C -0.034 4.034 8 C -0.066 4.066 9 H 0.110 0.890 10 C -0.124 4.124 11 C 0.116 3.884 12 H 0.087 0.913 13 N -0.696 5.696 14 C 0.561 3.439 15 O -0.558 6.558 16 C -0.178 4.178 17 C 0.170 3.830 18 O -0.484 6.484 19 C -0.127 4.127 20 C -0.081 4.081 21 O -0.564 6.564 22 Si 0.782 3.218 23 C -0.096 4.096 24 C -0.098 4.098 25 C -0.117 4.117 26 C -0.060 4.060 27 C -0.138 4.138 28 C -0.165 4.165 29 H 0.063 0.937 30 H 0.062 0.938 31 H 0.115 0.885 32 H 0.140 0.860 33 H 0.143 0.857 34 H 0.139 0.861 35 H 0.087 0.913 36 H 0.104 0.896 37 H 0.413 0.587 38 H 0.403 0.597 39 H 0.084 0.916 40 H 0.401 0.599 41 H -0.282 1.282 42 H -0.285 1.285 43 H 0.133 0.867 44 H 0.083 0.917 45 H 0.072 0.928 46 H 0.092 0.908 47 H 0.166 0.834 48 H 0.101 0.899 49 H 0.068 0.932 50 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.388 -4.074 2.054 4.579 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.065 3.935 4 C -0.240 4.240 5 C -0.102 4.102 6 C -0.179 4.179 7 C -0.034 4.034 8 C -0.084 4.084 9 H 0.128 0.872 10 C -0.162 4.162 11 C 0.010 3.990 12 H 0.106 0.894 13 N -0.348 5.348 14 C 0.349 3.651 15 O -0.437 6.437 16 C -0.182 4.182 17 C 0.123 3.877 18 O -0.296 6.296 19 C -0.128 4.128 20 C -0.189 4.189 21 O -0.373 6.373 22 Si 0.685 3.315 23 C -0.114 4.114 24 C -0.098 4.098 25 C -0.173 4.173 26 C -0.078 4.078 27 C -0.177 4.177 28 C -0.183 4.183 29 H 0.082 0.918 30 H 0.081 0.919 31 H 0.134 0.866 32 H 0.157 0.843 33 H 0.161 0.839 34 H 0.156 0.844 35 H 0.106 0.894 36 H 0.122 0.878 37 H 0.251 0.749 38 H 0.263 0.737 39 H 0.102 0.898 40 H 0.252 0.748 41 H -0.208 1.208 42 H -0.212 1.212 43 H 0.150 0.850 44 H 0.102 0.898 45 H 0.091 0.909 46 H 0.111 0.889 47 H 0.183 0.817 48 H 0.119 0.881 49 H 0.087 0.913 50 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -0.575 -4.441 1.450 4.707 hybrid contribution -1.042 0.062 0.327 1.094 sum -1.617 -4.378 1.777 4.994 Atomic orbital electron populations 1.23296 0.76654 1.05396 1.02101 1.86040 1.23276 1.27275 1.88785 1.19290 0.92838 0.84637 0.96765 1.21490 1.00940 0.92421 1.09188 1.21241 0.94981 0.97569 0.96389 1.21177 0.93836 0.98770 1.04093 1.19602 0.95447 0.91894 0.96489 1.21605 0.89986 0.99497 0.97356 0.87160 1.23381 0.96829 0.99916 0.96043 1.21871 0.83154 0.96339 0.97617 0.89433 1.45455 1.07890 1.12210 1.69251 1.18166 0.83499 0.86814 0.76572 1.90806 1.85808 1.15746 1.51321 1.20473 0.93403 0.95081 1.09199 1.18461 0.90670 0.83417 0.95174 1.84766 1.92563 1.17270 1.34994 1.20045 0.95275 0.93739 1.03694 1.24883 0.97342 1.04137 0.92583 1.86495 1.44785 1.70231 1.35834 0.94033 0.84549 0.76306 0.76571 1.21244 0.98875 0.93487 0.97744 1.20113 0.92159 0.98328 0.99186 1.20921 1.04761 0.88335 1.03303 1.21431 0.99535 0.90913 0.95922 1.23545 0.97669 0.98831 0.97613 1.20504 0.91465 0.98841 1.07530 0.91846 0.91898 0.86647 0.84267 0.83942 0.84359 0.89446 0.87782 0.74890 0.73723 0.89804 0.74841 1.20823 1.21239 0.84992 0.89810 0.90926 0.88916 0.81711 0.88077 0.91290 0.84935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.34 -1.78 10.50 -92.47 -0.97 -2.75 16 3 C 0.11 0.55 6.69 22.51 0.15 0.70 16 4 C -0.22 -0.53 9.04 22.37 0.20 -0.33 16 5 C -0.08 -0.07 10.04 22.26 0.22 0.16 16 6 C -0.16 -0.06 8.61 22.28 0.19 0.13 16 7 C -0.03 -0.03 5.29 -19.88 -0.11 -0.13 16 8 C -0.07 0.20 3.86 -11.02 -0.04 0.16 16 9 H 0.11 -0.60 8.09 -2.39 -0.02 -0.62 16 10 C -0.12 0.44 7.29 31.12 0.23 0.67 16 11 C 0.12 0.03 4.32 45.52 0.20 0.22 16 12 H 0.09 0.43 7.46 -2.39 -0.02 0.41 16 13 N -0.70 -0.30 5.21 -443.21 -2.31 -2.61 16 14 C 0.56 4.49 7.76 86.70 0.67 5.16 16 15 O -0.56 -8.89 14.76 16.91 0.25 -8.64 16 16 C -0.18 -1.13 5.89 -20.01 -0.12 -1.24 16 17 C 0.17 1.54 6.69 22.84 0.15 1.70 16 18 O -0.48 -5.12 10.91 -68.78 -0.75 -5.87 16 19 C -0.13 -0.85 5.30 -19.79 -0.10 -0.96 16 20 C -0.08 -0.17 2.36 71.24 0.17 0.00 16 21 O -0.56 -2.38 12.86 -148.98 -1.92 -4.30 16 22 Si 0.78 -1.73 30.19 68.60 2.07 0.35 16 23 C -0.10 -0.42 8.30 22.30 0.19 -0.23 16 24 C -0.10 -0.08 5.87 -19.90 -0.12 -0.19 16 25 C -0.12 0.57 10.00 71.24 0.71 1.29 16 26 C -0.06 0.00 9.18 22.52 0.21 0.20 16 27 C -0.14 0.18 7.25 31.12 0.23 0.41 16 28 C -0.16 -0.58 9.65 22.37 0.22 -0.36 16 29 H 0.06 -0.24 7.66 -2.39 -0.02 -0.26 16 30 H 0.06 -0.24 7.66 -2.39 -0.02 -0.25 16 31 H 0.12 -0.65 8.14 -2.38 -0.02 -0.67 16 32 H 0.14 -0.17 6.30 -2.91 -0.02 -0.19 16 33 H 0.14 -0.48 8.06 -2.91 -0.02 -0.51 16 34 H 0.14 -0.40 6.65 -2.91 -0.02 -0.42 16 35 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 36 H 0.10 -0.39 7.72 -2.39 -0.02 -0.41 16 37 H 0.41 -2.36 6.73 -92.71 -0.62 -2.98 16 38 H 0.40 1.21 9.06 -74.05 -0.67 0.54 16 39 H 0.08 -0.10 7.83 -2.39 -0.02 -0.12 16 40 H 0.40 -2.67 8.74 -74.05 -0.65 -3.31 16 41 H -0.28 -0.64 7.11 99.48 0.71 0.07 16 42 H -0.28 -1.01 6.74 99.48 0.67 -0.34 16 43 H 0.13 0.38 4.87 -2.91 -0.01 0.37 16 44 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 45 H 0.07 -0.37 8.08 -2.39 -0.02 -0.39 16 46 H 0.09 -0.79 8.08 -2.39 -0.02 -0.81 16 47 H 0.17 -1.26 6.40 -2.91 -0.02 -1.28 16 48 H 0.10 -0.20 6.31 -2.39 -0.02 -0.21 16 49 H 0.07 0.02 8.14 -2.39 -0.02 0.00 16 50 H 0.13 0.21 8.05 -2.91 -0.02 0.19 16 Total: 0.00 -27.35 407.83 -0.19 -27.54 By element: Atomic # 1 Polarization: -11.22 SS G_CDS: -0.92 Total: -12.14 kcal Atomic # 6 Polarization: 4.06 SS G_CDS: 4.36 Total: 8.42 kcal Atomic # 7 Polarization: -0.30 SS G_CDS: -2.31 Total: -2.61 kcal Atomic # 8 Polarization: -18.16 SS G_CDS: -3.39 Total: -21.55 kcal Atomic # 14 Polarization: -1.73 SS G_CDS: 2.07 Total: 0.35 kcal Total: -27.35 -0.19 -27.54 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13422088.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.095 kcal (2) G-P(sol) polarization free energy of solvation -27.346 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.441 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.538 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.634 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds