Wall clock time and date at job start Sat Mar 6 2021 14:40:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35903 * 116.99646 * 2 1 4 4 C 1.38709 * 120.05694 * 359.97438 * 3 2 1 5 5 C 1.38169 * 119.94213 * 180.02562 * 4 3 2 6 6 C 1.38252 * 120.05299 * 359.74770 * 5 4 3 7 7 C 1.38289 * 120.11061 * 0.50873 * 6 5 4 8 8 C 1.50701 * 119.96871 * 179.76410 * 7 6 5 9 9 H 1.08998 * 112.84697 * 168.52584 * 8 7 6 10 10 C 1.53787 * 113.61518 * 299.72695 * 8 7 6 11 11 C 1.53775 * 87.08038 * 139.97980 * 10 8 7 12 12 H 1.09002 * 113.61710 * 219.92969 * 11 10 8 13 13 N 1.46505 * 113.61714 * 89.11484 * 11 10 8 14 14 C 1.34777 * 120.00282 * 154.99516 * 13 11 10 15 15 O 1.21592 * 119.99797 * 0.02562 * 14 13 11 16 16 C 1.47516 * 120.00034 * 179.97438 * 14 13 11 17 17 C 1.39775 * 120.06824 * 180.02562 * 16 14 13 18 18 C 1.37633 * 119.92695 * 179.74610 * 17 16 14 19 19 C 1.50705 * 119.96288 * 180.25675 * 18 17 16 20 20 O 1.42901 * 109.46710 * 255.23511 * 19 18 17 21 21 Si 1.86296 * 109.46977 * 15.23696 * 19 18 17 22 22 C 1.39197 * 120.07201 * 0.49433 * 18 17 16 23 23 N 1.39045 * 119.93421 * 179.76606 * 22 18 17 24 24 C 1.46895 * 111.00040 * 119.72035 * 23 22 18 25 25 C 1.46902 * 110.99836 * 243.67661 * 23 22 18 26 26 C 1.39240 * 120.13592 * 359.48572 * 22 18 17 27 27 C 1.37591 * 120.07101 * 0.27613 * 26 22 18 28 28 C 1.53780 * 87.08410 * 334.56865 * 11 10 8 29 29 C 1.38116 * 120.05814 * 359.48906 * 7 6 5 30 30 H 1.08998 * 109.46610 * 179.97438 * 1 2 3 31 31 H 1.08992 * 109.47023 * 299.99912 * 1 2 3 32 32 H 1.09001 * 109.46734 * 60.00177 * 1 2 3 33 33 H 1.07995 * 120.03020 * 0.02562 * 4 3 2 34 34 H 1.07991 * 119.97120 * 179.97438 * 5 4 3 35 35 H 1.08001 * 119.93994 * 180.25310 * 6 5 4 36 36 H 1.08994 * 113.61502 * 25.43068 * 10 8 7 37 37 H 1.08997 * 113.60952 * 254.52847 * 10 8 7 38 38 H 0.96998 * 119.99671 * 334.99912 * 13 11 10 39 39 H 1.07994 * 120.03453 * 0.02562 * 17 16 14 40 40 H 1.09000 * 109.46707 * 135.24086 * 19 18 17 41 41 H 0.96700 * 113.99997 * 60.00406 * 20 19 18 42 42 H 1.48489 * 110.00368 * 58.68431 * 21 19 18 43 43 H 1.48507 * 109.99808 * 180.02562 * 21 19 18 44 44 H 1.09002 * 109.47411 * 60.00459 * 24 23 22 45 45 H 1.09007 * 109.47071 * 180.02562 * 24 23 22 46 46 H 1.08996 * 109.47424 * 299.99832 * 24 23 22 47 47 H 1.09000 * 109.46807 * 59.99802 * 25 23 22 48 48 H 1.08997 * 109.46913 * 179.97438 * 25 23 22 49 49 H 1.09005 * 109.47092 * 299.99942 * 25 23 22 50 50 H 1.08004 * 119.96729 * 180.25807 * 26 22 18 51 51 H 1.07995 * 120.03829 * 179.97438 * 27 26 22 52 52 H 1.08999 * 113.62182 * 139.98457 * 28 11 10 53 53 H 1.09007 * 113.60695 * 270.88328 * 28 11 10 54 54 H 1.07998 * 120.03115 * 180.27361 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2916 2.3750 -0.0005 5 6 1.9213 3.6048 -0.0011 6 6 3.3020 3.6758 0.0042 7 6 4.0562 2.5167 -0.0006 8 6 5.5611 2.5978 -0.0002 9 1 6.0366 1.6368 0.1956 10 6 6.1387 3.3338 -1.2208 11 6 7.1517 3.9736 -0.2569 12 1 7.3486 5.0253 -0.4653 13 7 8.3768 3.1884 -0.0868 14 6 9.5210 3.7965 0.2839 15 8 9.5364 4.9968 0.4776 16 6 10.7544 3.0057 0.4556 17 6 11.9417 3.6348 0.8406 18 6 13.0896 2.8934 1.0050 19 6 14.3688 3.5700 1.4257 20 8 15.2424 3.6790 0.3000 21 14 13.9851 5.2712 2.0810 22 6 13.0714 1.5201 0.7785 23 7 14.2338 0.7747 0.9408 24 6 14.0582 -0.2566 1.9721 25 6 14.6591 0.1786 -0.3327 26 6 11.8901 0.8905 0.3954 27 6 10.7381 1.6253 0.2340 28 6 6.1158 3.7478 0.8570 29 6 3.4316 1.2849 0.0000 30 1 -0.3632 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8899 32 1 -0.3633 0.5138 -0.8900 33 1 0.2131 2.3200 -0.0005 34 1 1.3344 4.5114 -0.0019 35 1 3.7922 4.6381 0.0079 36 1 5.4478 4.0494 -1.6663 37 1 6.5942 2.6699 -1.9555 38 1 8.3644 2.2308 -0.2411 39 1 11.9573 4.7008 1.0131 40 1 14.8522 2.9808 2.2050 41 1 14.8764 4.1916 -0.4337 42 1 13.0522 5.1736 3.2321 43 1 15.2386 5.9492 2.4987 44 1 13.2504 -0.9279 1.6808 45 1 14.9824 -0.8246 2.0790 46 1 13.8117 0.2177 2.9220 47 1 14.8494 0.9695 -1.0583 48 1 15.5706 -0.3985 -0.1773 49 1 13.8729 -0.4769 -0.7076 50 1 11.8781 -0.1759 0.2244 51 1 9.8223 1.1364 -0.0636 52 1 6.5528 3.4183 1.7996 53 1 5.4186 4.5768 0.9794 54 1 4.0211 0.3800 0.0007 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_13422196.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:14 Heat of formation + Delta-G solvation = 1.029122 kcal Electronic energy + Delta-G solvation = -34504.976596 eV Core-core repulsion = 29989.203269 eV Total energy + Delta-G solvation = -4515.773326 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.193 amu Computer time = 1.71 seconds Orbital eigenvalues (eV) -41.89446 -41.36023 -40.68769 -39.61698 -37.93207 -37.76993 -37.17018 -34.66804 -32.77647 -32.10762 -31.34891 -30.74996 -28.54308 -28.24456 -26.89988 -26.74243 -26.65202 -25.48858 -23.63059 -23.36241 -22.84626 -22.28558 -21.32257 -20.30713 -19.08901 -18.72750 -17.88555 -17.63503 -17.25502 -17.16906 -16.91381 -16.67345 -16.56248 -16.38813 -16.12631 -15.97450 -15.71258 -15.60558 -15.50411 -15.09677 -14.85470 -14.71749 -14.43434 -14.31956 -14.20806 -13.99586 -13.97221 -13.57947 -13.44425 -13.25647 -13.20556 -13.06693 -12.97864 -12.66665 -12.65459 -12.54083 -12.28966 -12.24798 -12.10449 -12.04633 -11.64649 -11.56709 -11.23947 -11.09602 -10.39240 -10.18877 -10.09634 -9.77242 -9.73437 -9.50523 -9.15262 -5.02820 -0.37691 0.16309 0.33060 0.48104 1.27680 1.56607 1.67634 1.89895 2.01645 2.35133 2.64070 2.74277 2.79928 3.46546 3.51866 3.59448 3.68576 3.71594 3.75700 3.82978 3.88177 3.98019 4.04127 4.10612 4.15559 4.19480 4.25000 4.27785 4.34203 4.36245 4.39256 4.44599 4.50513 4.54957 4.59292 4.63544 4.66225 4.66938 4.70701 4.78331 4.80968 4.88081 4.93396 4.97936 5.00969 5.04025 5.04480 5.10304 5.12659 5.17380 5.26862 5.34604 5.48575 5.52925 5.57921 5.71246 5.82912 5.85240 6.29231 6.43543 6.45460 6.82495 7.13147 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.223 4.223 5 C -0.084 4.084 6 C -0.160 4.160 7 C -0.034 4.034 8 C -0.068 4.068 9 H 0.109 0.891 10 C -0.122 4.122 11 C 0.117 3.883 12 H 0.093 0.907 13 N -0.695 5.695 14 C 0.562 3.438 15 O -0.571 6.571 16 C -0.148 4.148 17 C -0.056 4.056 18 C -0.117 4.117 19 C -0.037 4.037 20 O -0.542 6.542 21 Si 0.736 3.264 22 C 0.137 3.863 23 N -0.524 5.524 24 C 0.024 3.976 25 C 0.034 3.966 26 C -0.157 4.157 27 C -0.057 4.057 28 C -0.142 4.142 29 C -0.166 4.166 30 H 0.115 0.885 31 H 0.062 0.938 32 H 0.063 0.937 33 H 0.139 0.861 34 H 0.142 0.858 35 H 0.140 0.860 36 H 0.104 0.896 37 H 0.089 0.911 38 H 0.414 0.586 39 H 0.141 0.859 40 H 0.107 0.893 41 H 0.389 0.611 42 H -0.295 1.295 43 H -0.289 1.289 44 H 0.044 0.956 45 H 0.083 0.917 46 H 0.063 0.937 47 H 0.067 0.933 48 H 0.079 0.921 49 H 0.041 0.959 50 H 0.147 0.853 51 H 0.159 0.841 52 H 0.066 0.934 53 H 0.100 0.900 54 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.318 -4.224 -3.736 7.102 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.241 4.241 5 C -0.102 4.102 6 C -0.178 4.178 7 C -0.034 4.034 8 C -0.087 4.087 9 H 0.128 0.872 10 C -0.160 4.160 11 C 0.011 3.989 12 H 0.111 0.889 13 N -0.347 5.347 14 C 0.350 3.650 15 O -0.451 6.451 16 C -0.151 4.151 17 C -0.075 4.075 18 C -0.118 4.118 19 C -0.149 4.149 20 O -0.348 6.348 21 Si 0.643 3.357 22 C 0.042 3.958 23 N -0.245 5.245 24 C -0.122 4.122 25 C -0.112 4.112 26 C -0.177 4.177 27 C -0.076 4.076 28 C -0.180 4.180 29 C -0.184 4.184 30 H 0.133 0.867 31 H 0.081 0.919 32 H 0.082 0.918 33 H 0.156 0.844 34 H 0.160 0.840 35 H 0.158 0.842 36 H 0.122 0.878 37 H 0.108 0.892 38 H 0.252 0.748 39 H 0.158 0.842 40 H 0.124 0.876 41 H 0.238 0.762 42 H -0.223 1.223 43 H -0.217 1.217 44 H 0.062 0.938 45 H 0.101 0.899 46 H 0.082 0.918 47 H 0.086 0.914 48 H 0.098 0.902 49 H 0.059 0.941 50 H 0.165 0.835 51 H 0.177 0.823 52 H 0.085 0.915 53 H 0.119 0.881 54 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -3.431 -3.102 -2.394 5.208 hybrid contribution -0.915 -1.391 0.168 1.674 sum -4.346 -4.493 -2.226 6.635 Atomic orbital electron populations 1.23288 0.76687 1.05366 1.02083 1.86040 1.23248 1.27325 1.88804 1.19302 0.92879 0.84614 0.96819 1.21485 1.00905 0.92466 1.09275 1.21245 0.95055 0.97518 0.96405 1.21186 0.93775 0.98828 1.04032 1.19627 0.95600 0.91817 0.96351 1.21632 0.89842 0.99535 0.97654 0.87240 1.23368 0.96836 0.99867 0.95932 1.21876 0.83173 0.96600 0.97236 0.88885 1.45474 1.07956 1.12299 1.68951 1.18340 0.83834 0.86828 0.75962 1.90793 1.86140 1.16130 1.52079 1.19845 0.93425 0.94616 1.07188 1.21076 0.91085 0.99890 0.95485 1.20251 0.95583 0.93554 1.02448 1.24693 0.89731 1.07283 0.93171 1.86518 1.42930 1.77515 1.27871 0.94234 0.77885 0.78683 0.84865 1.18983 0.89615 0.92340 0.94845 1.59366 1.29639 1.25677 1.09822 1.22532 1.02314 0.93148 0.94226 1.22426 1.00684 0.98973 0.89092 1.21838 0.92772 1.01547 1.01576 1.21434 0.99328 0.91584 0.95221 1.23567 0.97917 0.98812 0.97715 1.20509 0.91422 0.98896 1.07587 0.86682 0.91948 0.91834 0.84363 0.83974 0.84223 0.87808 0.89238 0.74771 0.84160 0.87579 0.76212 1.22257 1.21664 0.93755 0.89864 0.91837 0.91366 0.90249 0.94061 0.83491 0.82346 0.91477 0.88146 0.84982 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -1.65 10.50 -92.46 -0.97 -2.62 16 3 C 0.11 0.49 6.69 22.51 0.15 0.64 16 4 C -0.22 -0.42 9.04 22.37 0.20 -0.22 16 5 C -0.08 -0.01 10.04 22.26 0.22 0.21 16 6 C -0.16 0.09 8.62 22.29 0.19 0.29 16 7 C -0.03 0.01 5.29 -19.88 -0.11 -0.10 16 8 C -0.07 0.31 3.86 -11.01 -0.04 0.27 16 9 H 0.11 -0.74 8.09 -2.39 -0.02 -0.76 16 10 C -0.12 0.72 7.29 31.12 0.23 0.95 16 11 C 0.12 -0.30 4.32 45.51 0.20 -0.10 16 12 H 0.09 0.12 7.46 -2.39 -0.02 0.10 16 13 N -0.70 2.12 5.21 -443.22 -2.31 -0.19 16 14 C 0.56 1.91 7.76 86.69 0.67 2.58 16 15 O -0.57 -6.49 15.94 -4.01 -0.06 -6.55 16 16 C -0.15 -0.12 5.88 -20.08 -0.12 -0.24 16 17 C -0.06 -0.14 8.19 22.50 0.18 0.04 16 18 C -0.12 -0.25 5.27 -19.78 -0.10 -0.36 16 19 C -0.04 -0.11 2.33 71.24 0.17 0.06 16 20 O -0.54 -1.35 12.88 -148.98 -1.92 -3.27 16 21 Si 0.74 2.40 29.92 68.60 2.05 4.45 16 22 C 0.14 0.10 4.70 38.47 0.18 0.28 16 23 N -0.52 -0.35 4.20 -745.10 -3.13 -3.48 16 24 C 0.02 -0.05 9.34 127.69 1.19 1.14 16 25 C 0.03 -0.06 9.38 127.69 1.20 1.13 16 26 C -0.16 0.50 8.53 22.36 0.19 0.69 16 27 C -0.06 0.25 9.53 22.50 0.21 0.46 16 28 C -0.14 0.40 7.25 31.12 0.23 0.63 16 29 C -0.17 -0.47 9.65 22.37 0.22 -0.25 16 30 H 0.11 -0.67 8.14 -2.39 -0.02 -0.69 16 31 H 0.06 -0.25 7.66 -2.39 -0.02 -0.27 16 32 H 0.06 -0.27 7.66 -2.39 -0.02 -0.28 16 33 H 0.14 -0.22 6.30 -2.91 -0.02 -0.24 16 34 H 0.14 -0.57 8.06 -2.92 -0.02 -0.60 16 35 H 0.14 -0.57 6.64 -2.91 -0.02 -0.59 16 36 H 0.10 -0.62 7.73 -2.39 -0.02 -0.64 16 37 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 38 H 0.41 -3.73 6.72 -92.71 -0.62 -4.35 16 39 H 0.14 0.37 4.70 -2.91 -0.01 0.35 16 40 H 0.11 0.57 7.78 -2.39 -0.02 0.55 16 41 H 0.39 -2.01 8.70 -74.06 -0.64 -2.65 16 42 H -0.30 -2.84 7.11 99.48 0.71 -2.13 16 43 H -0.29 -2.74 7.11 99.48 0.71 -2.03 16 44 H 0.04 -0.20 7.10 -2.39 -0.02 -0.22 16 45 H 0.08 -0.28 8.12 -2.38 -0.02 -0.30 16 46 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 47 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 48 H 0.08 -0.22 8.12 -2.39 -0.02 -0.24 16 49 H 0.04 -0.18 7.32 -2.38 -0.02 -0.19 16 50 H 0.15 -1.00 6.99 -2.91 -0.02 -1.02 16 51 H 0.16 -1.79 6.39 -2.91 -0.02 -1.80 16 52 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 53 H 0.10 -0.33 6.29 -2.38 -0.01 -0.35 16 54 H 0.13 0.13 8.05 -2.91 -0.02 0.10 16 Total: 0.00 -21.33 432.20 -0.25 -21.58 By element: Atomic # 1 Polarization: -18.82 SS G_CDS: -0.29 Total: -19.10 kcal Atomic # 6 Polarization: 2.80 SS G_CDS: 6.37 Total: 9.17 kcal Atomic # 7 Polarization: 1.77 SS G_CDS: -5.44 Total: -3.67 kcal Atomic # 8 Polarization: -9.48 SS G_CDS: -2.95 Total: -12.44 kcal Atomic # 14 Polarization: 2.40 SS G_CDS: 2.05 Total: 4.45 kcal Total: -21.33 -0.25 -21.58 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13422196.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.613 kcal (2) G-P(sol) polarization free energy of solvation -21.332 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.281 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.584 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.029 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.71 seconds