Wall clock time and date at job start Sat Mar 6 2021 14:40:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35906 * 116.99963 * 2 1 4 4 C 1.38709 * 120.06040 * 180.29466 * 3 2 1 5 5 C 1.38164 * 119.94469 * 180.25027 * 4 3 2 6 6 C 1.50695 * 119.97246 * 179.74628 * 5 4 3 7 7 H 1.09002 * 112.85270 * 348.53204 * 6 5 4 8 8 C 1.53778 * 113.61522 * 119.72623 * 6 5 4 9 9 C 1.53782 * 87.08305 * 140.06806 * 8 6 5 10 10 H 1.09005 * 113.61366 * 219.93803 * 9 8 6 11 11 N 1.46495 * 113.61683 * 89.11860 * 9 8 6 12 12 C 1.34777 * 120.00434 * 155.00184 * 11 9 8 13 13 O 1.21659 * 119.99452 * 359.97438 * 12 11 9 14 14 C 1.47041 * 120.00325 * 180.02562 * 12 11 9 15 15 C 1.36220 * 123.49155 * 179.97438 * 14 12 11 16 16 Cl 1.73593 * 124.60787 * 0.02562 * 15 14 12 17 17 S 1.70451 * 110.78672 * 180.02562 * 15 14 12 18 18 C 1.75492 * 92.46796 * 0.02562 * 17 15 14 19 19 C 1.50694 * 124.68533 * 180.02562 * 18 17 15 20 20 O 1.42907 * 109.46933 * 244.99720 * 19 18 17 21 21 Si 1.86297 * 109.47336 * 4.99734 * 19 18 17 22 22 C 1.32693 * 110.62667 * 359.97438 * 18 17 15 23 23 C 1.53780 * 113.69473 * 217.26518 * 6 5 4 24 24 C 1.38239 * 120.05610 * 359.47622 * 5 4 3 25 25 C 1.38289 * 120.11330 * 0.22874 * 24 5 4 26 26 C 1.38123 * 120.05201 * 0.04461 * 25 24 5 27 27 H 1.09001 * 109.46968 * 299.99690 * 1 2 3 28 28 H 1.08992 * 109.47203 * 60.00241 * 1 2 3 29 29 H 1.08996 * 109.46432 * 179.97438 * 1 2 3 30 30 H 1.08004 * 120.02679 * 359.97438 * 4 3 2 31 31 H 1.09003 * 113.61275 * 25.51766 * 8 6 5 32 32 H 1.09001 * 113.69513 * 254.63055 * 8 6 5 33 33 H 0.97001 * 119.99860 * 335.00132 * 11 9 8 34 34 H 1.09007 * 109.47541 * 124.99939 * 19 18 17 35 35 H 0.96698 * 113.99487 * 60.00093 * 20 19 18 36 36 H 1.48494 * 110.00286 * 58.68157 * 21 19 18 37 37 H 1.48498 * 110.00302 * 180.02562 * 21 19 18 38 38 H 1.08000 * 123.44781 * 180.26892 * 22 18 17 39 39 H 1.08997 * 113.62011 * 105.46017 * 23 6 5 40 40 H 1.08999 * 113.61038 * 334.55626 * 23 6 5 41 41 H 1.07998 * 119.94519 * 180.24909 * 24 5 4 42 42 H 1.08001 * 119.97521 * 180.02562 * 25 24 5 43 43 H 1.08005 * 120.02478 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2850 -0.0062 5 6 4.0559 2.5173 -0.0009 6 6 5.5606 2.5985 -0.0019 7 1 6.0365 1.6374 0.1929 8 6 6.1371 3.3350 -1.2225 9 6 7.1525 3.9727 -0.2596 10 1 7.3502 5.0244 -0.4672 11 7 8.3769 3.1860 -0.0925 12 6 9.5225 3.7923 0.2771 13 8 9.5397 4.9931 0.4714 14 6 10.7516 3.0027 0.4442 15 6 11.9466 3.5415 0.8143 16 17 12.2088 5.2254 1.1449 17 16 13.1497 2.3377 0.9087 18 6 12.0276 1.0726 0.4395 19 6 12.3887 -0.3832 0.2937 20 8 12.2456 -0.7748 -1.0731 21 14 14.1532 -0.6423 0.8325 22 6 10.8171 1.5748 0.2319 23 6 6.1181 3.7468 0.8557 24 6 3.3018 3.6759 -0.0005 25 6 1.9207 3.6048 -0.0005 26 6 1.2913 2.3753 0.0000 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3632 -1.0277 -0.0005 30 1 4.0207 0.3801 -0.0106 31 1 5.4462 4.0520 -1.6662 32 1 6.5908 2.6727 -1.9597 33 1 8.3632 2.2286 -0.2478 34 1 11.7267 -0.9859 0.9156 35 1 12.8066 -0.2790 -1.6851 36 1 14.3225 -0.2090 2.2427 37 1 14.5218 -2.0740 0.6930 38 1 9.9669 0.9770 -0.0615 39 1 6.5564 3.4158 1.7972 40 1 5.4221 4.5763 0.9802 41 1 3.7920 4.6382 -0.0004 42 1 1.3337 4.5114 -0.0006 43 1 0.2127 2.3204 -0.0005 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_13431040.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:24 Heat of formation + Delta-G solvation = -13.035102 kcal Electronic energy + Delta-G solvation = -28732.545132 eV Core-core repulsion = 24477.553156 eV Total energy + Delta-G solvation = -4254.991975 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.068 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.73415 -40.99310 -39.93705 -38.81951 -38.04166 -37.78433 -36.93700 -34.47032 -32.15119 -31.63788 -30.92587 -28.25275 -27.07955 -26.69841 -26.60757 -25.12137 -23.57928 -22.37396 -22.22855 -20.85637 -20.27326 -19.42800 -18.73298 -17.90080 -17.76420 -17.24487 -17.03913 -16.84269 -16.67832 -16.43001 -16.11506 -15.90454 -15.74883 -15.68863 -15.14159 -14.76740 -14.55556 -14.43970 -14.35526 -14.19400 -14.07273 -13.97688 -13.47330 -13.26444 -13.17963 -12.90613 -12.67994 -12.59508 -12.37783 -12.30426 -12.15417 -12.10740 -11.86755 -11.64692 -11.58115 -11.25975 -10.97387 -10.57450 -10.17801 -9.89372 -9.75428 -9.63841 -9.16131 -5.13896 -0.63077 -0.18889 0.32047 0.47158 0.48177 0.71949 1.04637 1.19032 1.58194 1.90384 2.10890 2.15548 2.34529 2.73174 3.28479 3.46291 3.60296 3.69313 3.73142 3.83208 3.87177 3.89054 3.96833 4.08883 4.18345 4.27117 4.33888 4.36295 4.38227 4.45154 4.54107 4.61853 4.67668 4.70122 4.77998 4.78592 4.86738 4.96433 4.97562 5.02116 5.09634 5.15134 5.33639 5.48032 5.53467 5.70046 5.81949 6.42935 6.44192 6.70899 7.13209 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.166 4.166 5 C -0.034 4.034 6 C -0.067 4.067 7 H 0.108 0.892 8 C -0.122 4.122 9 C 0.118 3.882 10 H 0.091 0.909 11 N -0.693 5.693 12 C 0.573 3.427 13 O -0.558 6.558 14 C -0.167 4.167 15 C -0.139 4.139 16 Cl 0.004 6.996 17 S 0.267 5.733 18 C -0.229 4.229 19 C -0.019 4.019 20 O -0.543 6.543 21 Si 0.714 3.286 22 C -0.069 4.069 23 C -0.140 4.140 24 C -0.160 4.160 25 C -0.084 4.084 26 C -0.222 4.222 27 H 0.062 0.938 28 H 0.063 0.937 29 H 0.115 0.885 30 H 0.132 0.868 31 H 0.103 0.897 32 H 0.088 0.912 33 H 0.414 0.586 34 H 0.134 0.866 35 H 0.398 0.602 36 H -0.262 1.262 37 H -0.267 1.267 38 H 0.179 0.821 39 H 0.066 0.934 40 H 0.100 0.900 41 H 0.139 0.861 42 H 0.143 0.857 43 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.039 -3.533 -2.463 4.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.184 4.184 5 C -0.034 4.034 6 C -0.086 4.086 7 H 0.127 0.873 8 C -0.160 4.160 9 C 0.013 3.987 10 H 0.109 0.891 11 N -0.344 5.344 12 C 0.359 3.641 13 O -0.437 6.437 14 C -0.187 4.187 15 C -0.285 4.285 16 Cl 0.032 6.968 17 S 0.532 5.468 18 C -0.346 4.346 19 C -0.133 4.133 20 O -0.351 6.351 21 Si 0.617 3.383 22 C -0.097 4.097 23 C -0.179 4.179 24 C -0.178 4.178 25 C -0.102 4.102 26 C -0.240 4.240 27 H 0.081 0.919 28 H 0.082 0.918 29 H 0.133 0.867 30 H 0.150 0.850 31 H 0.122 0.878 32 H 0.107 0.893 33 H 0.251 0.749 34 H 0.151 0.849 35 H 0.249 0.751 36 H -0.188 1.188 37 H -0.192 1.192 38 H 0.196 0.804 39 H 0.085 0.915 40 H 0.118 0.882 41 H 0.157 0.843 42 H 0.161 0.839 43 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 1.725 -3.520 -1.123 4.078 hybrid contribution -2.486 0.062 -0.039 2.488 sum -0.761 -3.458 -1.162 3.727 Atomic orbital electron populations 1.23289 0.76676 1.05367 1.02096 1.86041 1.23258 1.27288 1.88794 1.19294 0.92842 0.84645 0.96797 1.20504 0.91473 0.98859 1.07598 1.19610 0.95519 0.91853 0.96393 1.21608 0.89907 0.99485 0.97559 0.87340 1.23367 0.96809 0.99869 0.95959 1.21848 0.83149 0.96425 0.97296 0.89135 1.45393 1.07735 1.12219 1.69095 1.17674 0.83244 0.86599 0.76534 1.90859 1.85862 1.15587 1.51428 1.20303 0.93382 0.94799 1.10219 1.25809 1.00929 0.93661 1.08137 1.98426 1.95812 1.09602 1.92912 1.83181 1.08204 0.92109 1.63258 1.24944 0.97654 1.00996 1.11035 1.24436 1.11782 0.88508 0.88541 1.86522 1.69481 1.63680 1.15414 0.94318 0.76836 0.84509 0.82679 1.21129 0.98823 0.90499 0.99285 1.23550 0.97847 0.98799 0.97659 1.21173 0.93809 0.98778 1.04077 1.21244 0.95001 0.97555 0.96390 1.21487 1.00922 0.92419 1.09213 0.91923 0.91825 0.86688 0.85034 0.87816 0.89345 0.74867 0.84881 0.75119 1.18789 1.19157 0.80417 0.91526 0.88175 0.84309 0.83931 0.84282 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.34 -1.87 10.50 -92.49 -0.97 -2.84 16 3 C 0.11 0.58 6.69 22.51 0.15 0.73 16 4 C -0.17 -0.64 9.65 22.36 0.22 -0.42 16 5 C -0.03 -0.03 5.29 -19.88 -0.11 -0.14 16 6 C -0.07 0.20 3.85 -11.02 -0.04 0.16 16 7 H 0.11 -0.55 8.09 -2.39 -0.02 -0.57 16 8 C -0.12 0.51 7.29 31.12 0.23 0.74 16 9 C 0.12 -0.08 4.32 45.52 0.20 0.11 16 10 H 0.09 0.31 7.46 -2.38 -0.02 0.29 16 11 N -0.69 0.59 5.24 -443.65 -2.33 -1.74 16 12 C 0.57 3.32 7.79 86.55 0.67 3.99 16 13 O -0.56 -7.59 14.51 -4.22 -0.06 -7.65 16 14 C -0.17 -0.42 5.98 -19.84 -0.12 -0.54 16 15 C -0.14 -0.52 6.87 67.35 0.46 -0.06 16 16 Cl 0.00 0.03 27.20 -2.72 -0.07 -0.05 16 17 S 0.27 -0.72 20.19 -56.49 -1.14 -1.86 16 18 C -0.23 1.06 5.65 24.51 0.14 1.20 16 19 C -0.02 0.12 2.94 71.23 0.21 0.33 16 20 O -0.54 3.26 12.88 -148.98 -1.92 1.34 16 21 Si 0.71 -4.08 30.92 68.60 2.12 -1.96 16 22 C -0.07 0.25 9.75 22.70 0.22 0.47 16 23 C -0.14 0.19 7.25 31.12 0.23 0.41 16 24 C -0.16 -0.06 8.61 22.28 0.19 0.13 16 25 C -0.08 -0.07 10.04 22.25 0.22 0.15 16 26 C -0.22 -0.56 9.04 22.37 0.20 -0.36 16 27 H 0.06 -0.22 7.66 -2.39 -0.02 -0.24 16 28 H 0.06 -0.23 7.66 -2.39 -0.02 -0.25 16 29 H 0.11 -0.61 8.14 -2.39 -0.02 -0.63 16 30 H 0.13 0.28 8.06 -2.91 -0.02 0.26 16 31 H 0.10 -0.46 7.72 -2.39 -0.02 -0.48 16 32 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 33 H 0.41 -2.70 7.24 -92.71 -0.67 -3.37 16 34 H 0.13 -0.94 7.96 -2.38 -0.02 -0.96 16 35 H 0.40 -5.29 8.70 -74.06 -0.64 -5.94 16 36 H -0.26 0.27 7.11 99.48 0.71 0.98 16 37 H -0.27 -0.20 7.11 99.48 0.71 0.51 16 38 H 0.18 -1.53 7.10 -2.91 -0.02 -1.55 16 39 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 40 H 0.10 -0.19 6.32 -2.39 -0.02 -0.21 16 41 H 0.14 -0.41 6.66 -2.91 -0.02 -0.43 16 42 H 0.14 -0.48 8.06 -2.91 -0.02 -0.50 16 43 H 0.14 -0.15 6.30 -2.91 -0.02 -0.17 16 Total: 0.00 -20.14 385.89 -0.38 -20.52 By element: Atomic # 1 Polarization: -13.56 SS G_CDS: -0.19 Total: -13.75 kcal Atomic # 6 Polarization: 3.80 SS G_CDS: 4.19 Total: 7.99 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -2.33 Total: -1.74 kcal Atomic # 8 Polarization: -6.20 SS G_CDS: -2.95 Total: -9.15 kcal Atomic # 14 Polarization: -4.08 SS G_CDS: 2.12 Total: -1.96 kcal Atomic # 16 Polarization: -0.72 SS G_CDS: -1.14 Total: -1.86 kcal Atomic # 17 Polarization: 0.03 SS G_CDS: -0.07 Total: -0.05 kcal Total: -20.14 -0.38 -20.52 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13431040.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.483 kcal (2) G-P(sol) polarization free energy of solvation -20.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.660 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.375 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.518 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.035 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds