Wall clock time and date at job start Sat Mar 6 2021 14:40:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35899 * 116.99903 * 2 1 4 4 C 1.38721 * 120.05455 * 359.97438 * 3 2 1 5 5 C 1.38163 * 119.94041 * 180.02562 * 4 3 2 6 6 C 1.38244 * 120.05857 * 359.74353 * 5 4 3 7 7 C 1.38282 * 120.10972 * 0.51257 * 6 5 4 8 8 C 1.50707 * 119.97261 * 179.76432 * 7 6 5 9 9 H 1.08998 * 112.85084 * 168.52834 * 8 7 6 10 10 C 1.53780 * 113.61309 * 299.72936 * 8 7 6 11 11 C 1.53777 * 87.08203 * 139.97929 * 10 8 7 12 12 H 1.09001 * 113.61257 * 219.93444 * 11 10 8 13 13 N 1.46496 * 113.61861 * 89.11535 * 11 10 8 14 14 C 1.34777 * 120.00258 * 156.53091 * 13 11 10 15 15 O 1.21690 * 120.00222 * 359.97438 * 14 13 11 16 16 C 1.46676 * 119.99963 * 179.97438 * 14 13 11 17 17 C 1.37874 * 126.23351 * 180.02562 * 16 14 13 18 18 C 1.50695 * 126.45809 * 359.97213 * 17 16 14 19 19 C 1.39834 * 107.08673 * 180.02562 * 17 16 14 20 20 C 1.35453 * 107.86668 * 359.97438 * 19 17 16 21 21 C 1.50701 * 125.56879 * 180.02562 * 20 19 17 22 22 O 1.42903 * 109.47356 * 244.98052 * 21 20 19 23 23 Si 1.86295 * 109.46897 * 4.97704 * 21 20 19 24 24 N 1.35539 * 108.87124 * 359.73869 * 20 19 17 25 25 C 1.53775 * 87.17460 * 334.52027 * 11 10 8 26 26 C 1.38119 * 120.05791 * 359.48747 * 7 6 5 27 27 H 1.08997 * 109.46874 * 300.00118 * 1 2 3 28 28 H 1.09003 * 109.47041 * 60.00218 * 1 2 3 29 29 H 1.09006 * 109.46763 * 180.02562 * 1 2 3 30 30 H 1.07991 * 120.02536 * 0.04288 * 4 3 2 31 31 H 1.08004 * 119.96808 * 180.02562 * 5 4 3 32 32 H 1.08003 * 119.94300 * 180.25252 * 6 5 4 33 33 H 1.08996 * 113.61741 * 25.42362 * 10 8 7 34 34 H 1.09004 * 113.68547 * 254.53453 * 10 8 7 35 35 H 0.96999 * 119.99694 * 336.52481 * 13 11 10 36 36 H 1.09002 * 109.46894 * 90.00056 * 18 17 16 37 37 H 1.08998 * 109.47253 * 210.00404 * 18 17 16 38 38 H 1.09000 * 109.47392 * 330.00788 * 18 17 16 39 39 H 1.07999 * 126.06908 * 180.02562 * 19 17 16 40 40 H 1.08999 * 109.47125 * 124.98056 * 21 20 19 41 41 H 0.96705 * 113.99726 * 59.99703 * 22 21 20 42 42 H 1.48504 * 109.99984 * 58.68322 * 23 21 20 43 43 H 1.48496 * 110.00253 * 179.97438 * 23 21 20 44 44 H 0.96993 * 125.68415 * 180.28600 * 24 20 19 45 45 H 1.08999 * 113.61562 * 140.02002 * 25 11 10 46 46 H 1.09003 * 113.61852 * 270.93148 * 25 11 10 47 47 H 1.07998 * 120.03039 * 180.27477 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 1.2915 2.3750 -0.0005 5 6 1.9212 3.6048 -0.0011 6 6 3.3018 3.6758 0.0043 7 6 4.0561 2.5169 -0.0005 8 6 5.5610 2.5979 0.0000 9 1 6.0366 1.6369 0.1958 10 6 6.1386 3.3340 -1.2205 11 6 7.1516 3.9738 -0.2565 12 1 7.3484 5.0254 -0.4649 13 7 8.3766 3.1886 -0.0865 14 6 9.5134 3.7917 0.3142 15 8 9.5224 4.9885 0.5344 16 6 10.7398 3.0054 0.4850 17 6 11.9673 3.4872 0.8874 18 6 12.2992 4.9161 1.2325 19 6 12.8467 2.4003 0.9138 20 6 12.1564 1.2979 0.5360 21 6 12.7208 -0.0951 0.4266 22 8 12.6878 -0.5167 -0.9385 23 14 14.4813 -0.1014 1.0359 24 7 10.8733 1.6509 0.2786 25 6 6.1167 3.7500 0.8587 26 6 3.4315 1.2850 0.0000 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 0.2130 2.3200 -0.0003 31 1 1.3342 4.5114 -0.0011 32 1 3.7921 4.6382 0.0080 33 1 5.4477 4.0496 -1.6661 34 1 6.5944 2.6712 -1.9561 35 1 8.3696 2.2347 -0.2622 36 1 12.1278 5.0822 2.2961 37 1 13.3452 5.1130 0.9978 38 1 11.6644 5.5866 0.6532 39 1 13.8909 2.4338 1.1877 40 1 12.1243 -0.7775 1.0320 41 1 13.1988 0.0461 -1.5363 42 1 14.5328 0.3655 2.4447 43 1 15.0493 -1.4696 0.9338 44 1 10.1674 1.0498 -0.0062 45 1 6.5546 3.4218 1.8013 46 1 5.4198 4.5792 0.9805 47 1 4.0210 0.3801 0.0008 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_13940406.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:31 Heat of formation + Delta-G solvation = -8.827445 kcal Electronic energy + Delta-G solvation = -28908.235041 eV Core-core repulsion = 24831.335680 eV Total energy + Delta-G solvation = -4076.899361 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.60553 -41.59352 -40.69072 -39.41423 -37.93088 -37.73190 -34.74029 -33.39163 -32.24417 -31.60350 -30.86466 -28.34128 -28.15429 -27.21131 -26.82352 -25.78321 -23.62836 -23.03263 -22.23075 -21.58964 -20.58273 -20.18117 -19.54796 -18.76795 -18.10558 -17.29013 -17.11886 -16.87462 -16.76500 -16.69925 -16.27731 -16.14591 -15.82077 -15.46522 -15.31988 -14.99948 -14.71467 -14.52212 -14.36250 -14.27154 -14.04685 -13.90368 -13.60970 -13.56682 -13.46517 -13.32979 -13.23392 -12.90036 -12.74276 -12.39189 -12.18626 -12.16101 -12.02013 -11.72296 -11.66631 -11.35239 -10.99971 -10.72691 -10.19017 -9.81570 -9.76730 -9.16784 -9.14403 -5.06640 0.30746 0.36894 0.48411 1.11101 1.52919 1.63525 1.83738 1.97492 2.15477 2.28634 2.35584 2.72136 3.27997 3.33440 3.51365 3.58264 3.63764 3.77273 3.81988 3.86167 3.97440 4.11105 4.14831 4.15737 4.17398 4.18071 4.31108 4.35696 4.47422 4.51662 4.55854 4.59780 4.64528 4.73149 4.75046 4.84214 4.87239 4.91433 5.01513 5.04327 5.05293 5.22974 5.32510 5.38604 5.46488 5.49625 5.64500 5.66897 5.77407 5.91149 6.23535 6.36841 6.41871 6.43417 7.14346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.212 4.212 5 C -0.076 4.076 6 C -0.154 4.154 7 C -0.033 4.033 8 C -0.074 4.074 9 H 0.096 0.904 10 C -0.134 4.134 11 C 0.122 3.878 12 H 0.109 0.891 13 N -0.716 5.716 14 C 0.594 3.406 15 O -0.519 6.519 16 C -0.057 4.057 17 C -0.063 4.063 18 C -0.094 4.094 19 C -0.200 4.200 20 C 0.026 3.974 21 C -0.055 4.055 22 O -0.543 6.543 23 Si 0.721 3.279 24 N -0.525 5.525 25 C -0.142 4.142 26 C -0.149 4.149 27 H 0.056 0.944 28 H 0.056 0.944 29 H 0.101 0.899 30 H 0.128 0.872 31 H 0.126 0.874 32 H 0.126 0.874 33 H 0.102 0.898 34 H 0.077 0.923 35 H 0.394 0.606 36 H 0.069 0.931 37 H 0.066 0.934 38 H 0.081 0.919 39 H 0.151 0.849 40 H 0.114 0.886 41 H 0.384 0.616 42 H -0.253 1.253 43 H -0.253 1.253 44 H 0.416 0.584 45 H 0.075 0.925 46 H 0.099 0.901 47 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.454 -1.004 -1.894 2.191 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.231 4.231 5 C -0.094 4.094 6 C -0.172 4.172 7 C -0.033 4.033 8 C -0.093 4.093 9 H 0.115 0.885 10 C -0.172 4.172 11 C 0.016 3.984 12 H 0.127 0.873 13 N -0.367 5.367 14 C 0.382 3.618 15 O -0.394 6.394 16 C -0.170 4.170 17 C -0.071 4.071 18 C -0.151 4.151 19 C -0.225 4.225 20 C -0.092 4.092 21 C -0.166 4.166 22 O -0.349 6.349 23 Si 0.620 3.380 24 N -0.121 5.121 25 C -0.181 4.181 26 C -0.168 4.168 27 H 0.075 0.925 28 H 0.075 0.925 29 H 0.120 0.880 30 H 0.145 0.855 31 H 0.144 0.856 32 H 0.144 0.856 33 H 0.120 0.880 34 H 0.095 0.905 35 H 0.228 0.772 36 H 0.087 0.913 37 H 0.085 0.915 38 H 0.100 0.900 39 H 0.168 0.832 40 H 0.132 0.868 41 H 0.232 0.768 42 H -0.177 1.177 43 H -0.178 1.178 44 H 0.253 0.747 45 H 0.094 0.906 46 H 0.117 0.883 47 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -0.343 -1.179 -0.950 1.553 hybrid contribution -1.570 -0.923 -0.104 1.824 sum -1.913 -2.102 -1.054 3.032 Atomic orbital electron populations 1.23090 0.78057 1.04210 1.01460 1.86077 1.21649 1.26900 1.88577 1.19037 0.92307 0.84278 0.95962 1.21277 1.00183 0.92455 1.09193 1.20953 0.94579 0.97079 0.96790 1.20924 0.93651 0.98143 1.04497 1.19429 0.94633 0.92196 0.97019 1.21658 0.90963 0.99089 0.97549 0.88549 1.23418 0.97608 1.00016 0.96140 1.21855 0.82963 0.97072 0.96462 0.87314 1.45571 1.09428 1.11620 1.70098 1.17011 0.81386 0.86796 0.76615 1.90841 1.84341 1.13778 1.50469 1.20212 0.96410 0.83100 1.17264 1.19942 0.90688 0.96509 0.99960 1.20399 1.01874 0.90718 1.02084 1.20603 1.00145 0.91179 1.10532 1.21108 0.84739 0.96987 1.06350 1.24956 1.12543 0.90831 0.88230 1.86504 1.75986 1.55675 1.16688 0.94013 0.76890 0.83729 0.83350 1.41864 1.10220 1.07600 1.52418 1.23622 0.97960 0.98408 0.98103 1.20291 0.91340 0.98166 1.07012 0.92535 0.92516 0.88034 0.85462 0.85598 0.85635 0.88007 0.90469 0.77215 0.91266 0.91507 0.89986 0.83155 0.86841 0.76837 1.17691 1.17812 0.74675 0.90641 0.88306 0.85395 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.77 10.50 -19.42 -0.20 -0.98 16 3 C 0.13 0.30 6.69 -39.21 -0.26 0.04 16 4 C -0.21 -0.24 9.04 -39.43 -0.36 -0.60 16 5 C -0.08 -0.04 10.04 -39.61 -0.40 -0.43 16 6 C -0.15 -0.04 8.62 -39.56 -0.34 -0.38 16 7 C -0.03 -0.02 5.29 -104.65 -0.55 -0.57 16 8 C -0.07 0.10 3.87 -90.81 -0.35 -0.25 16 9 H 0.10 -0.20 8.09 -51.93 -0.42 -0.62 16 10 C -0.13 0.26 7.29 -25.92 -0.19 0.07 16 11 C 0.12 -0.08 4.29 -67.13 -0.29 -0.37 16 12 H 0.11 0.08 7.50 -51.93 -0.39 -0.30 16 13 N -0.72 0.41 5.26 -54.33 -0.29 0.12 16 14 C 0.59 1.45 7.79 -12.85 -0.10 1.35 16 15 O -0.52 -2.93 14.42 5.20 0.07 -2.86 16 16 C -0.06 -0.10 7.06 -81.98 -0.58 -0.67 16 17 C -0.06 -0.13 6.21 -104.16 -0.65 -0.77 16 18 C -0.09 -0.15 9.83 36.00 0.35 0.20 16 19 C -0.20 -0.05 9.27 -39.98 -0.37 -0.42 16 20 C 0.03 -0.01 6.46 -81.95 -0.53 -0.54 16 21 C -0.06 0.09 3.08 36.01 0.11 0.20 16 22 O -0.54 0.71 12.88 -35.23 -0.45 0.25 16 23 Si 0.72 -1.53 30.56 -169.99 -5.19 -6.72 16 24 N -0.52 0.33 5.99 -5.69 -0.03 0.30 16 25 C -0.14 0.12 7.27 -25.77 -0.19 -0.07 16 26 C -0.15 -0.26 9.65 -39.43 -0.38 -0.64 16 27 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 28 H 0.06 -0.11 7.66 -51.93 -0.40 -0.50 16 29 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 30 H 0.13 -0.07 6.30 -52.49 -0.33 -0.40 16 31 H 0.13 -0.18 8.06 -52.48 -0.42 -0.60 16 32 H 0.13 -0.17 6.64 -52.48 -0.35 -0.52 16 33 H 0.10 -0.21 7.73 -51.93 -0.40 -0.61 16 34 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 35 H 0.39 -1.16 7.83 -40.82 -0.32 -1.48 16 36 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 37 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 38 H 0.08 0.26 6.48 -51.93 -0.34 -0.07 16 39 H 0.15 -0.28 6.19 -52.49 -0.32 -0.60 16 40 H 0.11 -0.17 7.96 -51.93 -0.41 -0.58 16 41 H 0.38 -1.82 8.70 45.56 0.40 -1.43 16 42 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 43 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 44 H 0.42 -1.21 8.19 -40.82 -0.33 -1.54 16 45 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 46 H 0.10 -0.12 6.30 -51.93 -0.33 -0.44 16 47 H 0.13 0.10 8.05 -52.49 -0.42 -0.32 16 LS Contribution 385.43 15.07 5.81 5.81 Total: 0.00 -8.63 385.43 -10.87 -19.49 By element: Atomic # 1 Polarization: -6.02 SS G_CDS: -6.50 Total: -12.53 kcal Atomic # 6 Polarization: 1.18 SS G_CDS: -4.08 Total: -2.89 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -0.32 Total: 0.42 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -0.58 Total: -3.58 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.19 Total: -6.72 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -8.63 -10.87 -19.49 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13940406.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.666 kcal (2) G-P(sol) polarization free energy of solvation -8.627 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.040 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.867 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.494 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds