Wall clock time and date at job start Sat Mar 6 2021 14:40:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35902 * 117.00199 * 2 1 4 4 C 1.38711 * 120.05636 * 180.22861 * 3 2 1 5 5 C 1.38172 * 119.94007 * 180.27799 * 4 3 2 6 6 C 1.50701 * 119.96825 * 179.75336 * 5 4 3 7 7 H 1.09000 * 112.90925 * 348.46505 * 6 5 4 8 8 C 1.53784 * 113.61605 * 119.72157 * 6 5 4 9 9 C 1.53787 * 87.07923 * 139.97671 * 8 6 5 10 10 H 1.08997 * 113.61087 * 219.93398 * 9 8 6 11 11 N 1.46503 * 113.61181 * 89.11654 * 9 8 6 12 12 C 1.34776 * 119.99784 * 154.99519 * 11 9 8 13 13 O 1.21288 * 120.00074 * 0.02562 * 12 11 9 14 14 C 1.50695 * 119.99809 * 179.97438 * 12 11 9 15 15 C 1.50703 * 109.46941 * 180.02562 * 14 12 11 16 16 C 1.34850 * 125.89253 * 85.02825 * 15 14 12 17 17 C 1.40886 * 107.42147 * 179.97438 * 16 15 14 18 18 C 1.34858 * 107.41551 * 0.02562 * 17 16 15 19 19 C 1.50693 * 125.88928 * 180.02562 * 18 17 16 20 20 O 1.42898 * 109.47177 * 244.96902 * 19 18 17 21 21 Si 1.86298 * 109.47450 * 4.97227 * 19 18 17 22 22 N 1.36341 * 125.89183 * 264.71520 * 15 14 12 23 23 C 1.53778 * 87.08035 * 334.56830 * 9 8 6 24 24 C 1.38237 * 120.05609 * 359.46902 * 5 4 3 25 25 C 1.38285 * 120.11397 * 0.30144 * 24 5 4 26 26 C 1.38126 * 120.05454 * 359.95470 * 25 24 5 27 27 H 1.08994 * 109.46926 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.47121 * 299.99801 * 1 2 3 29 29 H 1.09005 * 109.46759 * 59.99947 * 1 2 3 30 30 H 1.07993 * 120.03099 * 0.02562 * 4 3 2 31 31 H 1.09004 * 113.61451 * 25.43157 * 8 6 5 32 32 H 1.08994 * 113.61477 * 254.52459 * 8 6 5 33 33 H 0.96997 * 119.99779 * 335.00324 * 11 9 8 34 34 H 1.09002 * 109.47694 * 300.00286 * 14 12 11 35 35 H 1.08997 * 109.47225 * 60.00875 * 14 12 11 36 36 H 1.08000 * 126.28859 * 359.97438 * 16 15 14 37 37 H 1.07998 * 126.29336 * 179.97438 * 17 16 15 38 38 H 1.09006 * 109.47260 * 124.97269 * 19 18 17 39 39 H 0.96705 * 113.99651 * 60.00356 * 20 19 18 40 40 H 1.48509 * 109.99654 * 58.68086 * 21 19 18 41 41 H 1.48499 * 110.00357 * 179.97438 * 21 19 18 42 42 H 0.97004 * 125.63597 * 0.02562 * 22 15 14 43 43 H 1.08999 * 113.61111 * 139.98327 * 23 9 8 44 44 H 1.08999 * 113.61280 * 270.79710 * 23 9 8 45 45 H 1.08001 * 119.94405 * 180.27585 * 24 5 4 46 46 H 1.07999 * 119.97274 * 179.97438 * 25 24 5 47 47 H 1.08000 * 120.02463 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 -0.0048 5 6 4.0560 2.5171 0.0010 6 6 5.5608 2.5981 0.0015 7 1 6.0374 1.6377 0.1977 8 6 6.1385 3.3346 -1.2188 9 6 7.1516 3.9740 -0.2545 10 1 7.3484 5.0257 -0.4624 11 7 8.3766 3.1886 -0.0848 12 6 9.5208 3.7966 0.2862 13 8 9.5362 4.9937 0.4800 14 6 10.7808 2.9886 0.4612 15 6 11.9076 3.8990 0.8765 16 6 12.1883 4.2850 2.1378 17 6 13.3147 5.1292 2.0798 18 6 13.6792 5.2275 0.7851 19 6 14.8378 6.0302 0.2520 20 8 14.3454 7.0836 -0.5786 21 14 15.7962 6.7574 1.6744 22 7 12.8228 4.4697 0.0425 23 6 6.1155 3.7477 0.8591 24 6 3.3020 3.6757 0.0005 25 6 1.9209 3.6047 0.0005 26 6 1.2915 2.3753 0.0000 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 4.0207 0.3800 -0.0089 31 1 5.4476 4.0506 -1.6640 32 1 6.5941 2.6711 -1.9538 33 1 8.3641 2.2312 -0.2396 34 1 10.6234 2.2319 1.2299 35 1 11.0345 2.5024 -0.4807 36 1 11.6487 3.9994 3.0287 37 1 13.7971 5.6100 2.9179 38 1 15.4908 5.3818 -0.3323 39 1 13.7562 7.7006 -0.1233 40 1 16.2868 5.6735 2.5632 41 1 16.9420 7.5510 1.1620 42 1 12.8573 4.3575 -0.9204 43 1 6.5526 3.4177 1.8016 44 1 5.4193 4.5772 0.9829 45 1 3.7923 4.6380 0.0006 46 1 1.3341 4.5114 0.0005 47 1 0.2129 2.3204 -0.0004 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_14644196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:33 Heat of formation + Delta-G solvation = -5.691311 kcal Electronic energy + Delta-G solvation = -28313.468708 eV Core-core repulsion = 24236.705341 eV Total energy + Delta-G solvation = -4076.763368 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.33080 -41.59218 -40.77700 -39.57086 -37.88391 -37.66270 -34.50270 -33.04638 -32.05938 -31.91093 -30.93680 -29.33694 -28.23642 -26.67119 -26.14102 -25.04214 -23.58729 -22.54759 -21.99576 -21.34593 -20.99989 -20.23641 -18.91067 -18.80204 -18.07795 -17.27282 -17.20548 -16.92786 -16.68046 -16.67420 -16.35798 -16.19344 -15.81070 -15.44883 -15.20899 -14.92087 -14.62344 -14.44466 -14.39325 -14.15458 -14.11008 -13.96443 -13.87456 -13.60954 -13.40857 -13.25758 -13.13636 -12.73926 -12.65682 -12.28300 -12.09864 -12.09545 -11.98865 -11.64061 -11.56349 -11.24436 -10.96770 -10.63062 -10.05082 -9.78700 -9.74413 -9.15762 -8.95531 -4.92952 0.32598 0.47553 1.11595 1.29451 1.62606 1.68993 1.89049 1.92399 2.30337 2.35139 2.52052 2.73676 3.49085 3.51285 3.68136 3.72372 3.74738 3.82057 3.87806 3.97175 4.04940 4.10587 4.19019 4.22253 4.27698 4.34349 4.37453 4.38887 4.50216 4.54740 4.62049 4.64554 4.69374 4.70925 4.79629 4.81025 4.88689 4.98964 5.04025 5.10950 5.18668 5.26725 5.30176 5.34162 5.49138 5.57438 5.72145 5.82397 6.01062 6.14602 6.43387 6.54376 6.65465 6.68241 7.28293 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.165 4.165 5 C -0.034 4.034 6 C -0.066 4.066 7 H 0.112 0.888 8 C -0.124 4.124 9 C 0.118 3.882 10 H 0.083 0.917 11 N -0.701 5.701 12 C 0.514 3.486 13 O -0.573 6.573 14 C -0.067 4.067 15 C 0.032 3.968 16 C -0.200 4.200 17 C -0.201 4.201 18 C -0.023 4.023 19 C -0.054 4.054 20 O -0.561 6.561 21 Si 0.801 3.199 22 N -0.538 5.538 23 C -0.141 4.141 24 C -0.161 4.161 25 C -0.084 4.084 26 C -0.222 4.222 27 H 0.115 0.885 28 H 0.062 0.938 29 H 0.063 0.937 30 H 0.133 0.867 31 H 0.098 0.902 32 H 0.088 0.912 33 H 0.417 0.583 34 H 0.143 0.857 35 H 0.128 0.872 36 H 0.141 0.859 37 H 0.154 0.846 38 H 0.107 0.893 39 H 0.395 0.605 40 H -0.285 1.285 41 H -0.293 1.293 42 H 0.418 0.582 43 H 0.069 0.931 44 H 0.095 0.905 45 H 0.138 0.862 46 H 0.142 0.858 47 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.876 -3.096 -0.424 4.979 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.184 4.184 5 C -0.034 4.034 6 C -0.084 4.084 7 H 0.130 0.870 8 C -0.162 4.162 9 C 0.012 3.988 10 H 0.101 0.899 11 N -0.354 5.354 12 C 0.301 3.699 13 O -0.452 6.452 14 C -0.108 4.108 15 C -0.082 4.082 16 C -0.224 4.224 17 C -0.226 4.226 18 C -0.136 4.136 19 C -0.164 4.164 20 O -0.369 6.369 21 Si 0.705 3.295 22 N -0.133 5.133 23 C -0.179 4.179 24 C -0.179 4.179 25 C -0.102 4.102 26 C -0.241 4.241 27 H 0.133 0.867 28 H 0.081 0.919 29 H 0.081 0.919 30 H 0.151 0.849 31 H 0.117 0.883 32 H 0.106 0.894 33 H 0.255 0.745 34 H 0.161 0.839 35 H 0.145 0.855 36 H 0.159 0.841 37 H 0.171 0.829 38 H 0.124 0.876 39 H 0.245 0.755 40 H -0.211 1.211 41 H -0.221 1.221 42 H 0.255 0.745 43 H 0.088 0.912 44 H 0.114 0.886 45 H 0.156 0.844 46 H 0.160 0.840 47 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -2.663 -2.729 -0.492 3.844 hybrid contribution -0.621 -0.853 -0.865 1.365 sum -3.284 -3.582 -1.357 5.045 Atomic orbital electron populations 1.23291 0.76674 1.05378 1.02092 1.86038 1.23261 1.27302 1.88794 1.19300 0.92883 0.84612 0.96787 1.20511 0.91428 0.98879 1.07537 1.19642 0.95674 0.91800 0.96331 1.21613 0.89753 0.99589 0.97480 0.87011 1.23361 0.96982 0.99804 0.96047 1.21774 0.83719 0.96239 0.97045 0.89886 1.45570 1.07897 1.12347 1.69578 1.20988 0.85451 0.88007 0.75437 1.90753 1.86111 1.17196 1.51098 1.20248 0.87289 0.96456 1.06763 1.19927 0.95003 1.02993 0.90287 1.20852 1.00639 1.04332 0.96608 1.20926 1.00765 1.05536 0.95355 1.21003 0.98298 1.02369 0.91937 1.24976 0.96496 0.90342 1.04570 1.86431 1.69029 1.40569 1.40851 0.92921 0.78244 0.82009 0.76289 1.41903 1.24067 1.37710 1.09635 1.23535 0.97899 0.98636 0.97838 1.21169 0.93811 0.98794 1.04143 1.21239 0.95020 0.97550 0.96434 1.21484 1.00918 0.92437 1.09248 0.86669 0.91905 0.91860 0.84910 0.88314 0.89362 0.74509 0.83930 0.85451 0.84129 0.82885 0.87599 0.75502 1.21122 1.22053 0.74459 0.91229 0.88621 0.84437 0.84003 0.84320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -1.70 10.50 -92.44 -0.97 -2.67 16 3 C 0.11 0.52 6.69 22.51 0.15 0.67 16 4 C -0.16 -0.50 9.65 22.37 0.22 -0.29 16 5 C -0.03 -0.01 5.29 -19.88 -0.11 -0.11 16 6 C -0.07 0.28 3.85 -11.01 -0.04 0.24 16 7 H 0.11 -0.76 8.10 -2.39 -0.02 -0.78 16 8 C -0.12 0.65 7.29 31.12 0.23 0.88 16 9 C 0.12 -0.27 4.32 45.52 0.20 -0.08 16 10 H 0.08 0.23 7.46 -2.39 -0.02 0.21 16 11 N -0.70 3.23 5.26 -440.03 -2.32 0.91 16 12 C 0.51 0.48 7.82 87.66 0.69 1.16 16 13 O -0.57 -6.60 15.63 -3.05 -0.05 -6.64 16 14 C -0.07 0.32 6.24 29.10 0.18 0.50 16 15 C 0.03 0.09 5.66 41.08 0.23 0.32 16 16 C -0.20 -1.02 10.76 22.14 0.24 -0.78 16 17 C -0.20 -0.92 9.37 22.14 0.21 -0.71 16 18 C -0.02 -0.09 6.50 41.08 0.27 0.18 16 19 C -0.05 -0.10 3.08 71.23 0.22 0.12 16 20 O -0.56 -1.73 12.88 -148.98 -1.92 -3.65 16 21 Si 0.80 -0.12 30.60 68.60 2.10 1.98 16 22 N -0.54 -1.54 6.07 -171.12 -1.04 -2.58 16 23 C -0.14 0.37 7.25 31.12 0.23 0.59 16 24 C -0.16 0.00 8.61 22.28 0.19 0.19 16 25 C -0.08 -0.04 10.04 22.25 0.22 0.18 16 26 C -0.22 -0.48 9.04 22.37 0.20 -0.27 16 27 H 0.12 -0.66 8.14 -2.39 -0.02 -0.68 16 28 H 0.06 -0.25 7.66 -2.39 -0.02 -0.26 16 29 H 0.06 -0.26 7.66 -2.38 -0.02 -0.27 16 30 H 0.13 0.15 8.06 -2.91 -0.02 0.12 16 31 H 0.10 -0.47 7.72 -2.39 -0.02 -0.49 16 32 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 33 H 0.42 -4.61 8.70 -92.71 -0.81 -5.41 16 34 H 0.14 -1.39 8.14 -2.39 -0.02 -1.41 16 35 H 0.13 -1.31 8.14 -2.39 -0.02 -1.33 16 36 H 0.14 0.42 8.06 -2.91 -0.02 0.40 16 37 H 0.15 0.10 6.24 -2.91 -0.02 0.08 16 38 H 0.11 0.20 7.96 -2.38 -0.02 0.18 16 39 H 0.39 -1.28 8.70 -74.05 -0.64 -1.92 16 40 H -0.28 -1.36 7.11 99.48 0.71 -0.65 16 41 H -0.29 -1.76 7.11 99.48 0.71 -1.05 16 42 H 0.42 -0.20 8.96 -92.71 -0.83 -1.04 16 43 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 44 H 0.10 -0.24 6.31 -2.39 -0.02 -0.25 16 45 H 0.14 -0.44 6.65 -2.91 -0.02 -0.46 16 46 H 0.14 -0.51 8.06 -2.91 -0.02 -0.53 16 47 H 0.14 -0.19 6.30 -2.91 -0.02 -0.21 16 Total: 0.00 -24.50 389.75 -0.78 -25.28 By element: Atomic # 1 Polarization: -15.26 SS G_CDS: -1.22 Total: -16.48 kcal Atomic # 6 Polarization: -0.78 SS G_CDS: 4.63 Total: 3.85 kcal Atomic # 7 Polarization: 1.69 SS G_CDS: -3.36 Total: -1.67 kcal Atomic # 8 Polarization: -10.02 SS G_CDS: -2.94 Total: -12.96 kcal Atomic # 14 Polarization: -0.12 SS G_CDS: 2.10 Total: 1.98 kcal Total: -24.50 -0.78 -25.28 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_14644196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.585 kcal (2) G-P(sol) polarization free energy of solvation -24.496 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.781 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.276 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.691 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds