Wall clock time and date at job start Sat Mar 6 2021 14:40:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35905 * 117.00158 * 2 1 4 4 C 1.38710 * 120.05519 * 179.97438 * 3 2 1 5 5 C 1.38167 * 119.94211 * 179.97438 * 4 3 2 6 6 C 1.50700 * 119.97050 * 180.02562 * 5 4 3 7 7 H 1.08998 * 112.85151 * 11.19771 * 6 5 4 8 8 C 1.53779 * 113.61271 * 142.50411 * 6 5 4 9 9 C 1.53779 * 87.08060 * 139.98126 * 8 6 5 10 10 H 1.09003 * 113.69207 * 220.00621 * 9 8 6 11 11 N 1.46496 * 113.61535 * 89.11949 * 9 8 6 12 12 C 1.34778 * 120.00231 * 107.50459 * 11 9 8 13 13 O 1.21274 * 120.00008 * 359.97438 * 12 11 9 14 14 C 1.50705 * 119.99701 * 179.97438 * 12 11 9 15 15 C 1.53546 * 109.82212 * 80.00073 * 14 12 11 16 16 C 1.53030 * 108.56134 * 180.48717 * 15 14 12 17 17 C 1.50202 * 110.32246 * 310.43982 * 16 15 14 18 18 C 1.50707 * 118.54493 * 200.05564 * 17 16 15 19 19 O 1.42901 * 109.46732 * 69.96740 * 18 17 16 20 20 Si 1.86304 * 109.46814 * 189.95779 * 18 17 16 21 21 C 1.31111 * 122.90699 * 20.01540 * 17 16 15 22 22 N 1.38925 * 121.84663 * 359.63930 * 21 17 16 23 23 C 1.53782 * 87.08348 * 334.56647 * 9 8 6 24 24 C 1.38240 * 120.05698 * 0.27505 * 5 4 3 25 25 C 1.38294 * 120.10785 * 359.45641 * 24 5 4 26 26 C 1.38122 * 120.05866 * 0.54149 * 25 24 5 27 27 H 1.08995 * 109.47312 * 60.00097 * 1 2 3 28 28 H 1.09000 * 109.47387 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.46920 * 300.00160 * 1 2 3 30 30 H 1.08000 * 120.02863 * 0.02562 * 4 3 2 31 31 H 1.09001 * 113.61774 * 25.43628 * 8 6 5 32 32 H 1.08997 * 113.61540 * 254.52944 * 8 6 5 33 33 H 0.97003 * 120.00049 * 287.49845 * 11 9 8 34 34 H 1.09001 * 109.81461 * 319.13516 * 14 12 11 35 35 H 1.09006 * 109.61557 * 300.20837 * 15 14 12 36 36 H 1.09004 * 109.62390 * 60.75783 * 15 14 12 37 37 H 1.08997 * 109.33320 * 70.68722 * 16 15 14 38 38 H 1.09004 * 109.32771 * 190.16605 * 16 15 14 39 39 H 1.08992 * 109.47443 * 309.96137 * 18 17 16 40 40 H 0.96697 * 114.00492 * 59.99199 * 19 18 17 41 41 H 1.48497 * 109.99866 * 180.02562 * 20 18 17 42 42 H 1.48496 * 110.00449 * 301.32491 * 20 18 17 43 43 H 1.08004 * 119.07364 * 179.61124 * 21 17 16 44 44 H 0.96999 * 120.55390 * 193.27021 * 22 21 17 45 45 H 1.08998 * 113.61418 * 139.98066 * 23 9 8 46 46 H 1.08992 * 113.61563 * 270.80366 * 23 9 8 47 47 H 1.07994 * 119.94712 * 179.70045 * 24 5 4 48 48 H 1.08001 * 119.96699 * 180.25241 * 25 24 5 49 49 H 1.07991 * 120.03044 * 179.70882 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.0560 2.5171 0.0000 6 6 5.5608 2.5981 0.0000 7 1 6.0365 1.6369 -0.1946 8 6 6.1158 3.7472 -0.8582 9 6 7.1514 3.9741 0.2557 10 1 7.3482 5.0260 0.4631 11 7 8.3765 3.1887 0.0869 12 6 9.5209 3.7965 -0.2840 13 8 9.5363 4.9934 -0.4785 14 6 10.7812 2.9885 -0.4571 15 6 10.7644 2.2832 -1.8209 16 6 12.0488 1.4632 -1.9611 17 6 13.2453 2.3061 -1.6235 18 6 14.5986 1.8678 -2.1214 19 8 14.6602 2.0314 -3.5396 20 14 15.9215 2.9054 -1.3187 21 6 13.1644 3.4067 -0.9156 22 7 11.9514 3.8782 -0.4296 23 6 6.1380 3.3353 1.2200 24 6 3.3020 3.6758 0.0047 25 6 1.9209 3.6047 -0.0015 26 6 1.2914 2.3753 -0.0010 27 1 -0.3633 0.5138 -0.8899 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3633 0.5139 0.8900 30 1 4.0206 0.3799 0.0005 31 1 5.4187 4.5760 -0.9817 32 1 6.5532 3.4167 -1.8003 33 1 8.3641 2.2313 0.2422 34 1 10.8587 2.2494 0.3403 35 1 9.8997 1.6222 -1.8804 36 1 10.7158 3.0264 -2.6168 37 1 12.0073 0.6091 -1.2851 38 1 12.1377 1.1044 -2.9865 39 1 14.7564 0.8192 -1.8693 40 1 14.5280 2.9421 -3.8367 41 1 17.2608 2.4835 -1.8018 42 1 15.6992 4.3406 -1.6285 43 1 14.0663 3.9621 -0.7040 44 1 11.8778 4.7791 -0.0777 45 1 6.5934 2.6722 1.9556 46 1 5.4479 4.0516 1.6657 47 1 3.7922 4.6380 0.0091 48 1 1.3341 4.5114 -0.0019 49 1 0.2128 2.3203 -0.0010 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_15413834.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:38 Heat of formation + Delta-G solvation = -27.658053 kcal Electronic energy + Delta-G solvation = -29425.089482 eV Core-core repulsion = 25320.062087 eV Total energy + Delta-G solvation = -4105.027396 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.177 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -41.87026 -41.15375 -40.28550 -39.23931 -37.93219 -37.35017 -34.69431 -33.22728 -32.98226 -32.07647 -30.94964 -28.34221 -27.73532 -26.83986 -26.01749 -25.35437 -23.80013 -23.56283 -22.46066 -21.90721 -20.38807 -19.47500 -19.09245 -18.79781 -18.05386 -17.32645 -17.21989 -16.95032 -16.75893 -16.69659 -16.46139 -16.00522 -15.87121 -15.72608 -15.53140 -15.24860 -14.99744 -14.56847 -14.44182 -14.39846 -14.14484 -14.01312 -13.86496 -13.62274 -13.35275 -13.26160 -13.14367 -12.89243 -12.74857 -12.39856 -12.22701 -12.18518 -11.98125 -11.72466 -11.67592 -11.61947 -11.37214 -11.25107 -10.87118 -10.26981 -10.20624 -9.76699 -9.15267 -8.49037 -4.88885 0.30888 0.48288 1.32132 1.41010 1.46276 1.63224 1.78373 2.05937 2.28888 2.58254 2.71906 3.32319 3.42240 3.55543 3.59534 3.63554 3.70772 3.79374 3.82556 3.85333 3.96852 3.97860 4.10905 4.15151 4.18350 4.26095 4.30860 4.34957 4.47424 4.51059 4.54621 4.56036 4.58940 4.62753 4.64706 4.71802 4.76102 4.85904 4.89302 5.00294 5.01824 5.05222 5.15304 5.26679 5.32580 5.40982 5.47789 5.54912 5.64539 5.77375 6.17895 6.35202 6.42028 6.60864 6.80202 7.03576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.129 3.871 4 C -0.149 4.149 5 C -0.033 4.033 6 C -0.073 4.073 7 H 0.099 0.901 8 C -0.143 4.143 9 C 0.119 3.881 10 H 0.106 0.894 11 N -0.708 5.708 12 C 0.516 3.484 13 O -0.529 6.529 14 C 0.136 3.864 15 C -0.126 4.126 16 C -0.054 4.054 17 C -0.275 4.275 18 C -0.050 4.050 19 O -0.537 6.537 20 Si 0.667 3.333 21 C 0.138 3.862 22 N -0.731 5.731 23 C -0.134 4.134 24 C -0.155 4.155 25 C -0.076 4.076 26 C -0.212 4.212 27 H 0.056 0.944 28 H 0.101 0.899 29 H 0.056 0.944 30 H 0.129 0.871 31 H 0.097 0.903 32 H 0.075 0.925 33 H 0.404 0.596 34 H 0.093 0.907 35 H 0.079 0.921 36 H 0.075 0.925 37 H 0.068 0.932 38 H 0.077 0.923 39 H 0.109 0.891 40 H 0.372 0.628 41 H -0.261 1.261 42 H -0.265 1.265 43 H 0.135 0.865 44 H 0.409 0.591 45 H 0.078 0.922 46 H 0.100 0.900 47 H 0.125 0.875 48 H 0.126 0.874 49 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.664 -1.857 3.830 5.617 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.167 4.167 5 C -0.033 4.033 6 C -0.092 4.092 7 H 0.118 0.882 8 C -0.181 4.181 9 C 0.013 3.987 10 H 0.124 0.876 11 N -0.360 5.360 12 C 0.301 3.699 13 O -0.404 6.404 14 C 0.027 3.973 15 C -0.165 4.165 16 C -0.091 4.091 17 C -0.285 4.285 18 C -0.161 4.161 19 O -0.342 6.342 20 Si 0.570 3.430 21 C 0.018 3.982 22 N -0.364 5.364 23 C -0.172 4.172 24 C -0.173 4.173 25 C -0.094 4.094 26 C -0.231 4.231 27 H 0.075 0.925 28 H 0.120 0.880 29 H 0.075 0.925 30 H 0.147 0.853 31 H 0.115 0.885 32 H 0.094 0.906 33 H 0.239 0.761 34 H 0.111 0.889 35 H 0.097 0.903 36 H 0.093 0.907 37 H 0.086 0.914 38 H 0.096 0.904 39 H 0.126 0.874 40 H 0.220 0.780 41 H -0.186 1.186 42 H -0.190 1.190 43 H 0.151 0.849 44 H 0.246 0.754 45 H 0.097 0.903 46 H 0.119 0.881 47 H 0.143 0.857 48 H 0.143 0.857 49 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -2.894 -1.351 3.601 4.813 hybrid contribution -0.906 0.410 -0.879 1.328 sum -3.800 -0.941 2.721 4.767 Atomic orbital electron populations 1.23088 0.78065 1.04222 1.01447 1.86079 1.21641 1.26892 1.88571 1.19040 0.92332 0.84261 0.95944 1.20300 0.91324 0.98191 1.06921 1.19433 0.94673 0.92172 0.97034 1.21612 0.90950 0.99172 0.97441 0.88249 1.23566 0.97951 0.98494 0.98098 1.21884 0.83170 0.97027 0.96604 0.87566 1.45614 1.08634 1.11801 1.69952 1.20631 0.84855 0.88347 0.76071 1.90738 1.85351 1.14981 1.49317 1.21002 0.84397 0.92060 0.99852 1.21869 0.99382 0.99853 0.95389 1.19963 0.90254 0.96604 1.02327 1.20903 0.97065 1.01783 1.08797 1.24670 0.99475 1.07487 0.84468 1.86569 1.93935 1.32860 1.20875 0.95428 0.78099 0.78207 0.91298 1.20505 0.88250 0.95612 0.93877 1.44277 1.05835 1.16618 1.69641 1.23420 0.97546 0.99999 0.96210 1.20917 0.93649 0.98137 1.04569 1.20950 0.94586 0.97076 0.96830 1.21275 1.00185 0.92466 1.09176 0.92546 0.88019 0.92533 0.85282 0.88452 0.90612 0.76148 0.88926 0.90288 0.90656 0.91354 0.90403 0.87351 0.78026 1.18610 1.19036 0.84867 0.75395 0.90306 0.88147 0.85721 0.85652 0.85485 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.65 10.50 -19.44 -0.20 -0.86 16 3 C 0.13 0.25 6.69 -39.22 -0.26 -0.01 16 4 C -0.15 -0.17 9.65 -39.43 -0.38 -0.55 16 5 C -0.03 0.00 5.29 -104.65 -0.55 -0.55 16 6 C -0.07 0.16 3.86 -90.96 -0.35 -0.19 16 7 H 0.10 -0.30 8.09 -51.93 -0.42 -0.72 16 8 C -0.14 0.24 7.25 -25.92 -0.19 0.05 16 9 C 0.12 -0.20 4.32 -67.12 -0.29 -0.49 16 10 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 11 N -0.71 1.61 5.26 -53.02 -0.28 1.33 16 12 C 0.52 0.10 7.10 -10.98 -0.08 0.02 16 13 O -0.53 -2.23 15.66 5.56 0.09 -2.14 16 14 C 0.14 -0.17 3.36 -68.51 -0.23 -0.40 16 15 C -0.13 0.16 5.47 -26.43 -0.14 0.01 16 16 C -0.05 0.04 5.85 -28.11 -0.16 -0.13 16 17 C -0.28 0.03 5.37 -101.33 -0.54 -0.51 16 18 C -0.05 -0.01 2.81 36.01 0.10 0.09 16 19 O -0.54 -1.13 12.88 -35.23 -0.45 -1.58 16 20 Si 0.67 -0.25 29.95 -169.99 -5.09 -5.34 16 21 C 0.14 -0.05 9.62 -16.08 -0.15 -0.20 16 22 N -0.73 0.10 5.47 -55.34 -0.30 -0.20 16 23 C -0.13 0.37 7.29 -25.92 -0.19 0.18 16 24 C -0.15 0.03 8.60 -39.56 -0.34 -0.31 16 25 C -0.08 -0.01 10.04 -39.60 -0.40 -0.41 16 26 C -0.21 -0.17 9.04 -39.43 -0.36 -0.53 16 27 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 28 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 29 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 30 H 0.13 0.02 8.05 -52.49 -0.42 -0.40 16 31 H 0.10 -0.17 6.32 -51.93 -0.33 -0.49 16 32 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 33 H 0.40 -1.93 8.70 -40.82 -0.36 -2.28 16 34 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 35 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 36 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 37 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 39 H 0.11 -0.02 7.96 -51.93 -0.41 -0.44 16 40 H 0.37 -0.16 8.70 45.56 0.40 0.23 16 41 H -0.26 -0.86 7.11 56.52 0.40 -0.46 16 42 H -0.26 -0.41 6.84 56.52 0.39 -0.03 16 43 H 0.13 -0.18 4.30 -52.48 -0.23 -0.41 16 44 H 0.41 0.08 8.08 -40.82 -0.33 -0.25 16 45 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 46 H 0.10 -0.26 7.72 -51.93 -0.40 -0.66 16 47 H 0.12 -0.21 6.67 -52.49 -0.35 -0.56 16 48 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 49 H 0.13 -0.11 6.30 -52.49 -0.33 -0.44 16 LS Contribution 391.95 15.07 5.91 5.91 Total: 0.00 -8.11 391.95 -11.25 -19.36 By element: Atomic # 1 Polarization: -6.10 SS G_CDS: -7.38 Total: -13.49 kcal Atomic # 6 Polarization: 0.54 SS G_CDS: -3.53 Total: -2.99 kcal Atomic # 7 Polarization: 1.71 SS G_CDS: -0.58 Total: 1.13 kcal Atomic # 8 Polarization: -4.01 SS G_CDS: -0.57 Total: -4.58 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: -5.09 Total: -5.34 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -8.11 -11.25 -19.36 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_15413834.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.297 kcal (2) G-P(sol) polarization free energy of solvation -8.111 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.408 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.250 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.361 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.658 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds