Wall clock time and date at job start Sat Mar 6 2021 14:40:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35905 * 117.00158 * 2 1 4 4 C 1.38710 * 120.05519 * 179.97438 * 3 2 1 5 5 C 1.38167 * 119.94211 * 179.97438 * 4 3 2 6 6 C 1.50700 * 119.97050 * 180.02562 * 5 4 3 7 7 H 1.08998 * 112.85151 * 11.19771 * 6 5 4 8 8 C 1.53779 * 113.61271 * 142.50411 * 6 5 4 9 9 C 1.53779 * 87.08060 * 139.98126 * 8 6 5 10 10 H 1.09003 * 113.69207 * 220.00621 * 9 8 6 11 11 N 1.46496 * 113.61535 * 89.11949 * 9 8 6 12 12 C 1.34778 * 120.00231 * 107.50459 * 11 9 8 13 13 O 1.21274 * 120.00008 * 359.97438 * 12 11 9 14 14 C 1.50705 * 119.99701 * 179.97438 * 12 11 9 15 15 C 1.53546 * 109.82212 * 80.00073 * 14 12 11 16 16 C 1.53030 * 108.56134 * 180.48717 * 15 14 12 17 17 C 1.50202 * 110.32246 * 310.43982 * 16 15 14 18 18 C 1.50707 * 118.54493 * 200.05564 * 17 16 15 19 19 O 1.42901 * 109.46732 * 69.96740 * 18 17 16 20 20 Si 1.86304 * 109.46814 * 189.95779 * 18 17 16 21 21 C 1.31111 * 122.90699 * 20.01540 * 17 16 15 22 22 N 1.38925 * 121.84663 * 359.63930 * 21 17 16 23 23 C 1.53782 * 87.08348 * 334.56647 * 9 8 6 24 24 C 1.38240 * 120.05698 * 0.27505 * 5 4 3 25 25 C 1.38294 * 120.10785 * 359.45641 * 24 5 4 26 26 C 1.38122 * 120.05866 * 0.54149 * 25 24 5 27 27 H 1.08995 * 109.47312 * 60.00097 * 1 2 3 28 28 H 1.09000 * 109.47387 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.46920 * 300.00160 * 1 2 3 30 30 H 1.08000 * 120.02863 * 0.02562 * 4 3 2 31 31 H 1.09001 * 113.61774 * 25.43628 * 8 6 5 32 32 H 1.08997 * 113.61540 * 254.52944 * 8 6 5 33 33 H 0.97003 * 120.00049 * 287.49845 * 11 9 8 34 34 H 1.09001 * 109.81461 * 319.13516 * 14 12 11 35 35 H 1.09006 * 109.61557 * 300.20837 * 15 14 12 36 36 H 1.09004 * 109.62390 * 60.75783 * 15 14 12 37 37 H 1.08997 * 109.33320 * 70.68722 * 16 15 14 38 38 H 1.09004 * 109.32771 * 190.16605 * 16 15 14 39 39 H 1.08992 * 109.47443 * 309.96137 * 18 17 16 40 40 H 0.96697 * 114.00492 * 59.99199 * 19 18 17 41 41 H 1.48497 * 109.99866 * 180.02562 * 20 18 17 42 42 H 1.48496 * 110.00449 * 301.32491 * 20 18 17 43 43 H 1.08004 * 119.07364 * 179.61124 * 21 17 16 44 44 H 0.96999 * 120.55390 * 193.27021 * 22 21 17 45 45 H 1.08998 * 113.61418 * 139.98066 * 23 9 8 46 46 H 1.08992 * 113.61563 * 270.80366 * 23 9 8 47 47 H 1.07994 * 119.94712 * 179.70045 * 24 5 4 48 48 H 1.08001 * 119.96699 * 180.25241 * 25 24 5 49 49 H 1.07991 * 120.03044 * 179.70882 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.0560 2.5171 0.0000 6 6 5.5608 2.5981 0.0000 7 1 6.0365 1.6369 -0.1946 8 6 6.1158 3.7472 -0.8582 9 6 7.1514 3.9741 0.2557 10 1 7.3482 5.0260 0.4631 11 7 8.3765 3.1887 0.0869 12 6 9.5209 3.7965 -0.2840 13 8 9.5363 4.9934 -0.4785 14 6 10.7812 2.9885 -0.4571 15 6 10.7644 2.2832 -1.8209 16 6 12.0488 1.4632 -1.9611 17 6 13.2453 2.3061 -1.6235 18 6 14.5986 1.8678 -2.1214 19 8 14.6602 2.0314 -3.5396 20 14 15.9215 2.9054 -1.3187 21 6 13.1644 3.4067 -0.9156 22 7 11.9514 3.8782 -0.4296 23 6 6.1380 3.3353 1.2200 24 6 3.3020 3.6758 0.0047 25 6 1.9209 3.6047 -0.0015 26 6 1.2914 2.3753 -0.0010 27 1 -0.3633 0.5138 -0.8899 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3633 0.5139 0.8900 30 1 4.0206 0.3799 0.0005 31 1 5.4187 4.5760 -0.9817 32 1 6.5532 3.4167 -1.8003 33 1 8.3641 2.2313 0.2422 34 1 10.8587 2.2494 0.3403 35 1 9.8997 1.6222 -1.8804 36 1 10.7158 3.0264 -2.6168 37 1 12.0073 0.6091 -1.2851 38 1 12.1377 1.1044 -2.9865 39 1 14.7564 0.8192 -1.8693 40 1 14.5280 2.9421 -3.8367 41 1 17.2608 2.4835 -1.8018 42 1 15.6992 4.3406 -1.6285 43 1 14.0663 3.9621 -0.7040 44 1 11.8778 4.7791 -0.0777 45 1 6.5934 2.6722 1.9556 46 1 5.4479 4.0516 1.6657 47 1 3.7922 4.6380 0.0091 48 1 1.3341 4.5114 -0.0019 49 1 0.2128 2.3203 -0.0010 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_15413834.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:36 Heat of formation + Delta-G solvation = -26.629461 kcal Electronic energy + Delta-G solvation = -29425.044879 eV Core-core repulsion = 25320.062087 eV Total energy + Delta-G solvation = -4104.982793 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.177 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -41.81149 -41.13589 -40.22807 -39.25352 -37.91272 -37.41305 -34.66848 -33.19153 -32.93599 -32.03894 -30.91242 -28.25367 -27.70138 -26.68175 -25.94921 -25.30280 -23.75397 -23.53910 -22.40071 -21.86477 -20.30504 -19.44983 -19.02518 -18.76387 -18.07056 -17.27875 -17.20343 -16.91019 -16.73602 -16.67156 -16.43053 -16.02350 -15.80429 -15.70032 -15.50913 -15.23666 -14.95836 -14.52243 -14.41587 -14.31316 -14.10894 -13.95407 -13.87867 -13.47844 -13.25132 -13.18600 -13.14232 -12.90233 -12.67983 -12.32359 -12.29334 -12.11197 -11.94099 -11.68424 -11.62980 -11.57702 -11.25768 -11.22471 -10.90388 -10.30969 -10.13647 -9.74521 -9.15688 -8.44925 -4.90063 0.32600 0.47608 1.34581 1.40337 1.47219 1.58659 1.87578 2.00295 2.35207 2.64775 2.73638 3.47137 3.50832 3.61516 3.68453 3.73531 3.80144 3.87651 3.89066 3.97530 4.07888 4.09900 4.18882 4.27635 4.33840 4.34341 4.38804 4.47602 4.54689 4.61949 4.63003 4.65854 4.68549 4.70929 4.79191 4.82414 4.86154 4.97702 5.02921 5.07069 5.10248 5.15572 5.23241 5.31796 5.34316 5.47951 5.52918 5.59868 5.70499 5.82511 6.25314 6.43487 6.46673 6.61766 6.82433 7.11726 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.165 4.165 5 C -0.034 4.034 6 C -0.067 4.067 7 H 0.112 0.888 8 C -0.141 4.141 9 C 0.117 3.883 10 H 0.088 0.912 11 N -0.693 5.693 12 C 0.516 3.484 13 O -0.574 6.574 14 C 0.139 3.861 15 C -0.121 4.121 16 C -0.054 4.054 17 C -0.280 4.280 18 C -0.057 4.057 19 O -0.558 6.558 20 Si 0.748 3.252 21 C 0.137 3.863 22 N -0.736 5.736 23 C -0.123 4.123 24 C -0.161 4.161 25 C -0.085 4.085 26 C -0.223 4.223 27 H 0.062 0.938 28 H 0.115 0.885 29 H 0.063 0.937 30 H 0.133 0.867 31 H 0.097 0.903 32 H 0.068 0.932 33 H 0.419 0.581 34 H 0.119 0.881 35 H 0.100 0.900 36 H 0.051 0.949 37 H 0.084 0.916 38 H 0.065 0.935 39 H 0.115 0.885 40 H 0.381 0.619 41 H -0.312 1.312 42 H -0.290 1.290 43 H 0.141 0.859 44 H 0.406 0.594 45 H 0.090 0.910 46 H 0.101 0.899 47 H 0.138 0.862 48 H 0.142 0.858 49 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.246 -2.564 4.715 6.843 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.183 4.183 5 C -0.034 4.034 6 C -0.085 4.085 7 H 0.130 0.870 8 C -0.180 4.180 9 C 0.012 3.988 10 H 0.106 0.894 11 N -0.345 5.345 12 C 0.302 3.698 13 O -0.453 6.453 14 C 0.030 3.970 15 C -0.160 4.160 16 C -0.091 4.091 17 C -0.291 4.291 18 C -0.167 4.167 19 O -0.365 6.365 20 Si 0.656 3.344 21 C 0.016 3.984 22 N -0.369 5.369 23 C -0.160 4.160 24 C -0.179 4.179 25 C -0.103 4.103 26 C -0.241 4.241 27 H 0.080 0.920 28 H 0.133 0.867 29 H 0.082 0.918 30 H 0.151 0.849 31 H 0.115 0.885 32 H 0.087 0.913 33 H 0.257 0.743 34 H 0.137 0.863 35 H 0.118 0.882 36 H 0.069 0.931 37 H 0.102 0.898 38 H 0.084 0.916 39 H 0.133 0.867 40 H 0.229 0.771 41 H -0.241 1.241 42 H -0.218 1.218 43 H 0.158 0.842 44 H 0.243 0.757 45 H 0.109 0.891 46 H 0.119 0.881 47 H 0.156 0.844 48 H 0.159 0.841 49 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -3.522 -2.099 4.503 6.090 hybrid contribution -0.744 0.651 -1.196 1.551 sum -4.266 -1.448 3.307 5.589 Atomic orbital electron populations 1.23287 0.76691 1.05380 1.02070 1.86040 1.23242 1.27308 1.88788 1.19307 0.92906 0.84597 0.96779 1.20519 0.91410 0.98918 1.07485 1.19638 0.95683 0.91775 0.96343 1.21629 0.89768 0.99600 0.97517 0.86967 1.23549 0.97911 0.98758 0.97773 1.21831 0.83424 0.96361 0.97211 0.89429 1.45505 1.07830 1.12524 1.68653 1.20899 0.85696 0.87821 0.75362 1.90722 1.86046 1.16975 1.51565 1.21131 0.83293 0.91970 1.00596 1.21828 1.00091 0.99489 0.94550 1.19975 0.90130 0.97033 1.01979 1.20913 0.97072 1.02108 1.08974 1.24844 1.00047 1.08133 0.83693 1.86539 1.94068 1.33853 1.22064 0.94547 0.74277 0.75512 0.90044 1.20594 0.88519 0.95495 0.93776 1.44386 1.06198 1.16757 1.69543 1.23358 0.96838 0.99840 0.96006 1.21169 0.93777 0.98808 1.04143 1.21238 0.95060 0.97521 0.96466 1.21482 1.00908 0.92466 1.09264 0.91962 0.86663 0.91845 0.84864 0.88507 0.91341 0.74346 0.86324 0.88152 0.93061 0.89764 0.91614 0.86723 0.77079 1.24099 1.21811 0.84237 0.75716 0.89123 0.88101 0.84383 0.84052 0.84376 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -1.60 10.50 -92.49 -0.97 -2.57 16 3 C 0.11 0.48 6.69 22.51 0.15 0.63 16 4 C -0.16 -0.42 9.65 22.37 0.22 -0.20 16 5 C -0.03 0.02 5.29 -19.88 -0.11 -0.09 16 6 C -0.07 0.35 3.86 -11.01 -0.04 0.30 16 7 H 0.11 -0.86 8.09 -2.39 -0.02 -0.88 16 8 C -0.14 0.51 7.25 31.12 0.23 0.73 16 9 C 0.12 -0.43 4.32 45.52 0.20 -0.23 16 10 H 0.09 0.07 7.46 -2.39 -0.02 0.05 16 11 N -0.69 3.79 5.26 -440.04 -2.32 1.48 16 12 C 0.52 0.08 7.10 87.66 0.62 0.70 16 13 O -0.57 -5.34 15.66 -3.01 -0.05 -5.39 16 14 C 0.14 -0.47 3.36 44.33 0.15 -0.32 16 15 C -0.12 0.38 5.47 30.79 0.17 0.55 16 16 C -0.05 0.11 5.85 29.70 0.17 0.29 16 17 C -0.28 0.17 5.37 -16.75 -0.09 0.08 16 18 C -0.06 -0.03 2.81 71.24 0.20 0.17 16 19 O -0.56 -2.63 12.88 -148.98 -1.92 -4.55 16 20 Si 0.75 -0.25 29.95 68.60 2.05 1.80 16 21 C 0.14 -0.13 9.62 83.42 0.80 0.67 16 22 N -0.74 0.33 5.47 -328.99 -1.80 -1.47 16 23 C -0.12 0.80 7.29 31.12 0.23 1.03 16 24 C -0.16 0.11 8.60 22.28 0.19 0.30 16 25 C -0.08 -0.01 10.04 22.26 0.22 0.22 16 26 C -0.22 -0.40 9.04 22.37 0.20 -0.20 16 27 H 0.06 -0.25 7.66 -2.39 -0.02 -0.27 16 28 H 0.12 -0.68 8.14 -2.39 -0.02 -0.70 16 29 H 0.06 -0.27 7.66 -2.38 -0.02 -0.29 16 30 H 0.13 0.08 8.05 -2.91 -0.02 0.05 16 31 H 0.10 -0.33 6.32 -2.39 -0.02 -0.35 16 32 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 33 H 0.42 -4.82 8.70 -92.71 -0.81 -5.62 16 34 H 0.12 -0.99 8.14 -2.39 -0.02 -1.01 16 35 H 0.10 -0.76 8.14 -2.38 -0.02 -0.78 16 36 H 0.05 0.11 8.14 -2.39 -0.02 0.09 16 37 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 38 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 39 H 0.11 -0.11 7.96 -2.39 -0.02 -0.13 16 40 H 0.38 -0.04 8.70 -74.06 -0.64 -0.68 16 41 H -0.31 -2.58 7.11 99.48 0.71 -1.88 16 42 H -0.29 -1.08 6.84 99.48 0.68 -0.40 16 43 H 0.14 -0.40 4.30 -2.91 -0.01 -0.41 16 44 H 0.41 0.32 8.08 -92.71 -0.75 -0.43 16 45 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 46 H 0.10 -0.62 7.72 -2.39 -0.02 -0.64 16 47 H 0.14 -0.55 6.67 -2.91 -0.02 -0.57 16 48 H 0.14 -0.56 8.06 -2.91 -0.02 -0.58 16 49 H 0.14 -0.22 6.30 -2.92 -0.02 -0.24 16 Total: 0.00 -20.47 391.95 -1.56 -22.03 By element: Atomic # 1 Polarization: -15.83 SS G_CDS: -1.19 Total: -17.02 kcal Atomic # 6 Polarization: 1.07 SS G_CDS: 4.62 Total: 5.69 kcal Atomic # 7 Polarization: 4.12 SS G_CDS: -4.11 Total: 0.01 kcal Atomic # 8 Polarization: -9.57 SS G_CDS: -2.94 Total: -12.51 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: 2.05 Total: 1.80 kcal Total: -20.47 -1.56 -22.03 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_15413834.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.599 kcal (2) G-P(sol) polarization free energy of solvation -20.465 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.065 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.030 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.629 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds