Wall clock time and date at job start Sat Mar 6 2021 14:40:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35897 * 117.00044 * 2 1 4 4 C 1.38713 * 120.05689 * 180.23245 * 3 2 1 5 5 C 1.38166 * 119.94598 * 180.26716 * 4 3 2 6 6 C 1.50690 * 119.97623 * 179.74358 * 5 4 3 7 7 H 1.09000 * 112.90879 * 348.47877 * 6 5 4 8 8 C 1.53786 * 113.61518 * 119.72529 * 6 5 4 9 9 C 1.53781 * 87.17350 * 140.02616 * 8 6 5 10 10 H 1.08998 * 113.61196 * 219.97759 * 9 8 6 11 11 N 1.46506 * 113.61613 * 89.15811 * 9 8 6 12 12 C 1.34774 * 119.99981 * 154.99882 * 11 9 8 13 13 O 1.21275 * 120.00090 * 0.02562 * 12 11 9 14 14 C 1.50696 * 119.99541 * 180.02562 * 12 11 9 15 15 C 1.53044 * 109.32929 * 180.86345 * 14 12 11 16 16 C 1.53553 * 108.55317 * 190.15580 * 15 14 12 17 17 N 1.47032 * 107.64875 * 60.97396 * 16 15 14 18 18 C 1.38933 * 118.88020 * 316.32376 * 17 16 15 19 19 C 1.31109 * 121.84630 * 13.29451 * 18 17 16 20 20 C 1.50699 * 118.54483 * 179.61381 * 19 18 17 21 21 O 1.42907 * 109.47153 * 120.02239 * 20 19 18 22 22 Si 1.86303 * 109.47241 * 0.02562 * 20 19 18 23 23 C 1.53781 * 87.08070 * 334.52830 * 9 8 6 24 24 C 1.38248 * 120.05076 * 359.47346 * 5 4 3 25 25 C 1.38280 * 120.11487 * 0.29482 * 24 5 4 26 26 C 1.38123 * 120.05562 * 359.95603 * 25 24 5 27 27 H 1.08996 * 109.47285 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.47211 * 300.00496 * 1 2 3 29 29 H 1.08999 * 109.47131 * 60.00173 * 1 2 3 30 30 H 1.07999 * 120.02862 * 0.02562 * 4 3 2 31 31 H 1.09002 * 113.61357 * 25.43533 * 8 6 5 32 32 H 1.09002 * 113.61608 * 254.61695 * 8 6 5 33 33 H 0.97003 * 119.99276 * 335.00814 * 11 9 8 34 34 H 1.09003 * 109.33212 * 300.33971 * 14 12 11 35 35 H 1.09000 * 109.61745 * 309.89245 * 15 14 12 36 36 H 1.09007 * 109.61991 * 70.43816 * 15 14 12 37 37 H 1.08996 * 109.83983 * 301.43286 * 16 15 14 38 38 H 1.09007 * 109.87270 * 180.53168 * 16 15 14 39 39 H 0.96991 * 120.56115 * 136.34669 * 17 16 15 40 40 H 1.07997 * 119.07311 * 193.31329 * 18 17 16 41 41 H 1.09000 * 109.47480 * 240.02057 * 20 19 18 42 42 H 0.96705 * 113.99403 * 299.99933 * 21 20 19 43 43 H 1.48492 * 110.00081 * 58.67906 * 22 20 19 44 44 H 1.48496 * 110.00055 * 180.02562 * 22 20 19 45 45 H 1.09005 * 113.61471 * 139.98321 * 23 9 8 46 46 H 1.08996 * 113.61178 * 270.79663 * 23 9 8 47 47 H 1.08007 * 119.94098 * 180.27554 * 24 5 4 48 48 H 1.08002 * 119.97667 * 179.97438 * 25 24 5 49 49 H 1.08007 * 120.02882 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4311 1.2848 -0.0049 5 6 4.0560 2.5171 0.0007 6 6 5.5607 2.5982 0.0013 7 1 6.0374 1.6378 0.1976 8 6 6.1384 3.3345 -1.2190 9 6 7.1532 3.9744 -0.2569 10 1 7.3495 5.0260 -0.4657 11 7 8.3787 3.1893 -0.0892 12 6 9.5235 3.7975 0.2795 13 8 9.5391 4.9946 0.4728 14 6 10.7841 2.9899 0.4514 15 6 11.9219 3.9142 0.8912 16 6 13.2423 3.1343 0.8146 17 7 13.4385 2.7261 -0.5842 18 6 12.3575 2.2156 -1.2921 19 6 11.1281 2.3219 -0.8491 20 6 10.0105 1.7488 -1.6820 21 8 9.3208 0.7483 -0.9300 22 14 10.7164 0.9866 -3.2285 23 6 6.1184 3.7504 0.8583 24 6 3.3019 3.6757 0.0002 25 6 1.9209 3.6047 0.0002 26 6 1.2914 2.3753 -0.0002 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 4.0207 0.3799 -0.0091 31 1 5.4476 4.0503 -1.6644 32 1 6.5928 2.6708 -1.9547 33 1 8.3661 2.2317 -0.2437 34 1 10.6243 2.2298 1.2162 35 1 11.9680 4.7786 0.2287 36 1 11.7503 4.2439 1.9159 37 1 13.1886 2.2524 1.4529 38 1 14.0678 3.7711 1.1330 39 1 14.3079 2.8114 -1.0056 40 1 12.5350 1.7171 -2.2336 41 1 9.3152 2.5432 -1.9531 42 1 9.8794 0.0087 -0.6543 43 1 11.6898 -0.0766 -2.8720 44 1 9.6242 0.4184 -4.0588 45 1 6.5564 3.4213 1.8007 46 1 5.4231 4.5805 0.9819 47 1 3.7923 4.6381 0.0000 48 1 1.3340 4.5113 0.0002 49 1 0.2128 2.3203 -0.0006 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_15608500.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:41 Heat of formation + Delta-G solvation = -20.584167 kcal Electronic energy + Delta-G solvation = -30765.595199 eV Core-core repulsion = 26660.874550 eV Total energy + Delta-G solvation = -4104.720649 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.177 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -41.78349 -41.10604 -40.12051 -38.90424 -37.97498 -37.62064 -34.28013 -33.31057 -32.81220 -31.96086 -30.81568 -28.25767 -27.46370 -26.63915 -26.40440 -25.26899 -23.50477 -23.30826 -22.31509 -21.69963 -20.17344 -19.35742 -19.10956 -18.63789 -17.96700 -17.43176 -17.16956 -16.94812 -16.79901 -16.62197 -16.38260 -16.09924 -15.73513 -15.64148 -15.40553 -15.02977 -14.74376 -14.53831 -14.38690 -14.33007 -14.11590 -13.83061 -13.74952 -13.38976 -13.26588 -13.12868 -13.04032 -12.76333 -12.60336 -12.29741 -12.19461 -12.05857 -11.97186 -11.70563 -11.57759 -11.49497 -11.45478 -11.13933 -10.56923 -10.51236 -9.74180 -9.64096 -9.05442 -8.56053 -4.98910 0.41898 0.58281 1.15477 1.30013 1.53643 1.90848 1.96217 2.36719 2.40581 2.50115 2.83155 3.22747 3.56922 3.62302 3.75132 3.78576 3.82699 3.91771 3.99586 4.03185 4.13060 4.20346 4.22118 4.24017 4.24338 4.25926 4.37095 4.43366 4.52370 4.56319 4.62221 4.63491 4.69610 4.72614 4.76977 4.80503 4.81071 4.97301 5.04692 5.09127 5.16003 5.18498 5.27926 5.29988 5.35715 5.42508 5.56981 5.72614 5.83852 5.88250 6.17511 6.36415 6.51005 6.72927 6.87276 7.52642 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.128 3.872 4 C -0.149 4.149 5 C -0.030 4.030 6 C -0.074 4.074 7 H 0.099 0.901 8 C -0.135 4.135 9 C 0.117 3.883 10 H 0.103 0.897 11 N -0.712 5.712 12 C 0.528 3.472 13 O -0.543 6.543 14 C -0.036 4.036 15 C -0.121 4.121 16 C 0.119 3.881 17 N -0.747 5.747 18 C 0.160 3.840 19 C -0.284 4.284 20 C -0.066 4.066 21 O -0.542 6.542 22 Si 0.671 3.329 23 C -0.143 4.143 24 C -0.154 4.154 25 C -0.077 4.077 26 C -0.214 4.214 27 H 0.101 0.899 28 H 0.056 0.944 29 H 0.056 0.944 30 H 0.129 0.871 31 H 0.097 0.903 32 H 0.076 0.924 33 H 0.415 0.585 34 H 0.093 0.907 35 H 0.082 0.918 36 H 0.080 0.920 37 H 0.061 0.939 38 H 0.084 0.916 39 H 0.404 0.596 40 H 0.133 0.867 41 H 0.118 0.882 42 H 0.380 0.620 43 H -0.261 1.261 44 H -0.257 1.257 45 H 0.073 0.927 46 H 0.095 0.905 47 H 0.125 0.875 48 H 0.125 0.875 49 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.381 -1.236 -1.351 3.003 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.083 3.917 4 C -0.168 4.168 5 C -0.030 4.030 6 C -0.092 4.092 7 H 0.118 0.882 8 C -0.173 4.173 9 C 0.011 3.989 10 H 0.121 0.879 11 N -0.372 5.372 12 C 0.315 3.685 13 O -0.420 6.420 14 C -0.057 4.057 15 C -0.159 4.159 16 C -0.005 4.005 17 N -0.377 5.377 18 C 0.037 3.963 19 C -0.295 4.295 20 C -0.177 4.177 21 O -0.350 6.350 22 Si 0.573 3.427 23 C -0.181 4.181 24 C -0.173 4.173 25 C -0.095 4.095 26 C -0.232 4.232 27 H 0.119 0.881 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.147 0.853 31 H 0.116 0.884 32 H 0.095 0.905 33 H 0.259 0.741 34 H 0.111 0.889 35 H 0.101 0.899 36 H 0.099 0.901 37 H 0.079 0.921 38 H 0.102 0.898 39 H 0.238 0.762 40 H 0.150 0.850 41 H 0.136 0.864 42 H 0.230 0.770 43 H -0.186 1.186 44 H -0.182 1.182 45 H 0.091 0.909 46 H 0.113 0.887 47 H 0.143 0.857 48 H 0.143 0.857 49 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 2.049 -0.922 -1.647 2.786 hybrid contribution -0.284 -1.188 0.746 1.431 sum 1.765 -2.110 -0.901 2.895 Atomic orbital electron populations 1.23075 0.78173 1.04125 1.01414 1.86077 1.21551 1.26950 1.88628 1.19035 0.92314 0.84226 0.96090 1.20316 0.91286 0.98272 1.06903 1.19475 0.94816 0.92106 0.96567 1.21642 0.90607 0.99319 0.97619 0.88240 1.23399 0.97693 0.99883 0.96289 1.21818 0.83857 0.97075 0.96186 0.87881 1.46367 1.07976 1.13196 1.69612 1.20496 0.84616 0.87969 0.75459 1.90690 1.85837 1.15165 1.50328 1.19631 0.92869 0.96917 0.96284 1.21740 0.92974 0.98167 1.03049 1.21663 0.97952 0.98443 0.82459 1.44607 1.10620 1.69978 1.12460 1.20369 0.87396 0.93692 0.94812 1.20489 0.93714 1.13828 1.01467 1.24956 0.97436 0.93845 1.01447 1.86234 1.40631 1.34881 1.73211 0.95148 0.81429 0.86004 0.80102 1.23597 0.98112 0.98256 0.98166 1.20929 0.93605 0.98192 1.04533 1.20937 0.94582 0.97023 0.96967 1.21254 1.00090 0.92468 1.09422 0.88102 0.92580 0.92572 0.85336 0.88409 0.90493 0.74132 0.88905 0.89900 0.90144 0.92088 0.89790 0.76154 0.85032 0.86435 0.77015 1.18592 1.18186 0.90857 0.88691 0.85679 0.85695 0.85551 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.32 -1.01 10.50 -19.42 -0.20 -1.22 16 3 C 0.13 0.42 6.69 -39.22 -0.26 0.15 16 4 C -0.15 -0.43 9.65 -39.43 -0.38 -0.81 16 5 C -0.03 -0.05 5.29 -104.65 -0.55 -0.61 16 6 C -0.07 -0.04 3.87 -90.82 -0.35 -0.39 16 7 H 0.10 0.06 8.10 -51.93 -0.42 -0.36 16 8 C -0.13 0.00 7.28 -25.92 -0.19 -0.19 16 9 C 0.12 0.14 4.32 -67.11 -0.29 -0.15 16 10 H 0.10 0.25 7.46 -51.93 -0.39 -0.13 16 11 N -0.71 -0.97 3.71 -53.02 -0.20 -1.16 16 12 C 0.53 1.59 6.82 -10.99 -0.07 1.51 16 13 O -0.54 -3.58 15.40 5.56 0.09 -3.49 16 14 C -0.04 -0.02 2.64 -93.14 -0.25 -0.27 16 15 C -0.12 -0.03 4.92 -26.42 -0.13 -0.16 16 16 C 0.12 -0.24 7.16 -3.47 -0.02 -0.27 16 17 N -0.75 1.69 5.83 -60.67 -0.35 1.34 16 18 C 0.16 -0.27 9.63 -16.08 -0.15 -0.42 16 19 C -0.28 0.20 5.11 -101.34 -0.52 -0.31 16 20 C -0.07 0.07 1.68 36.00 0.06 0.13 16 21 O -0.54 0.66 10.41 -35.23 -0.37 0.30 16 22 Si 0.67 -1.07 29.68 -169.99 -5.05 -6.11 16 23 C -0.14 -0.11 7.26 -25.78 -0.19 -0.30 16 24 C -0.15 -0.20 8.61 -39.56 -0.34 -0.54 16 25 C -0.08 -0.10 10.04 -39.61 -0.40 -0.50 16 26 C -0.21 -0.42 9.04 -39.43 -0.36 -0.77 16 27 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 28 H 0.06 -0.07 7.66 -51.93 -0.40 -0.47 16 29 H 0.06 -0.07 7.66 -51.93 -0.40 -0.47 16 30 H 0.13 0.28 8.06 -52.49 -0.42 -0.14 16 31 H 0.10 -0.05 7.72 -51.93 -0.40 -0.45 16 32 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.41 0.21 4.72 -40.82 -0.19 0.02 16 34 H 0.09 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.08 0.18 7.75 -51.93 -0.40 -0.22 16 36 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 37 H 0.06 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 39 H 0.40 -1.66 8.96 -40.82 -0.37 -2.03 16 40 H 0.13 -0.44 4.36 -52.49 -0.23 -0.67 16 41 H 0.12 -0.03 6.18 -51.93 -0.32 -0.35 16 42 H 0.38 -1.41 8.70 45.56 0.40 -1.02 16 43 H -0.26 -0.02 7.10 56.52 0.40 0.39 16 44 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 45 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 46 H 0.09 0.02 6.33 -51.93 -0.33 -0.31 16 47 H 0.13 -0.03 6.66 -52.48 -0.35 -0.38 16 48 H 0.13 -0.08 8.06 -52.49 -0.42 -0.50 16 49 H 0.13 0.02 6.30 -52.48 -0.33 -0.31 16 LS Contribution 381.21 15.07 5.74 5.74 Total: 0.00 -7.61 381.21 -10.87 -18.48 By element: Atomic # 1 Polarization: -3.83 SS G_CDS: -7.13 Total: -10.96 kcal Atomic # 6 Polarization: 0.49 SS G_CDS: -3.40 Total: -2.91 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -0.55 Total: 0.17 kcal Atomic # 8 Polarization: -3.93 SS G_CDS: -0.48 Total: -4.41 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.05 Total: -6.11 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -7.61 -10.87 -18.48 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_15608500.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.102 kcal (2) G-P(sol) polarization free energy of solvation -7.611 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.713 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.482 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.584 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds