Wall clock time and date at job start Sat Mar 6 2021 14:40:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35897 * 117.00044 * 2 1 4 4 C 1.38713 * 120.05689 * 180.23245 * 3 2 1 5 5 C 1.38166 * 119.94598 * 180.26716 * 4 3 2 6 6 C 1.50690 * 119.97623 * 179.74358 * 5 4 3 7 7 H 1.09000 * 112.90879 * 348.47877 * 6 5 4 8 8 C 1.53786 * 113.61518 * 119.72529 * 6 5 4 9 9 C 1.53781 * 87.17350 * 140.02616 * 8 6 5 10 10 H 1.08998 * 113.61196 * 219.97759 * 9 8 6 11 11 N 1.46506 * 113.61613 * 89.15811 * 9 8 6 12 12 C 1.34774 * 119.99981 * 154.99882 * 11 9 8 13 13 O 1.21275 * 120.00090 * 0.02562 * 12 11 9 14 14 C 1.50696 * 119.99541 * 180.02562 * 12 11 9 15 15 C 1.53044 * 109.32929 * 180.86345 * 14 12 11 16 16 C 1.53553 * 108.55317 * 190.15580 * 15 14 12 17 17 N 1.47032 * 107.64875 * 60.97396 * 16 15 14 18 18 C 1.38933 * 118.88020 * 316.32376 * 17 16 15 19 19 C 1.31109 * 121.84630 * 13.29451 * 18 17 16 20 20 C 1.50699 * 118.54483 * 179.61381 * 19 18 17 21 21 O 1.42907 * 109.47153 * 120.02239 * 20 19 18 22 22 Si 1.86303 * 109.47241 * 0.02562 * 20 19 18 23 23 C 1.53781 * 87.08070 * 334.52830 * 9 8 6 24 24 C 1.38248 * 120.05076 * 359.47346 * 5 4 3 25 25 C 1.38280 * 120.11487 * 0.29482 * 24 5 4 26 26 C 1.38123 * 120.05562 * 359.95603 * 25 24 5 27 27 H 1.08996 * 109.47285 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.47211 * 300.00496 * 1 2 3 29 29 H 1.08999 * 109.47131 * 60.00173 * 1 2 3 30 30 H 1.07999 * 120.02862 * 0.02562 * 4 3 2 31 31 H 1.09002 * 113.61357 * 25.43533 * 8 6 5 32 32 H 1.09002 * 113.61608 * 254.61695 * 8 6 5 33 33 H 0.97003 * 119.99276 * 335.00814 * 11 9 8 34 34 H 1.09003 * 109.33212 * 300.33971 * 14 12 11 35 35 H 1.09000 * 109.61745 * 309.89245 * 15 14 12 36 36 H 1.09007 * 109.61991 * 70.43816 * 15 14 12 37 37 H 1.08996 * 109.83983 * 301.43286 * 16 15 14 38 38 H 1.09007 * 109.87270 * 180.53168 * 16 15 14 39 39 H 0.96991 * 120.56115 * 136.34669 * 17 16 15 40 40 H 1.07997 * 119.07311 * 193.31329 * 18 17 16 41 41 H 1.09000 * 109.47480 * 240.02057 * 20 19 18 42 42 H 0.96705 * 113.99403 * 299.99933 * 21 20 19 43 43 H 1.48492 * 110.00081 * 58.67906 * 22 20 19 44 44 H 1.48496 * 110.00055 * 180.02562 * 22 20 19 45 45 H 1.09005 * 113.61471 * 139.98321 * 23 9 8 46 46 H 1.08996 * 113.61178 * 270.79663 * 23 9 8 47 47 H 1.08007 * 119.94098 * 180.27554 * 24 5 4 48 48 H 1.08002 * 119.97667 * 179.97438 * 25 24 5 49 49 H 1.08007 * 120.02882 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4311 1.2848 -0.0049 5 6 4.0560 2.5171 0.0007 6 6 5.5607 2.5982 0.0013 7 1 6.0374 1.6378 0.1976 8 6 6.1384 3.3345 -1.2190 9 6 7.1532 3.9744 -0.2569 10 1 7.3495 5.0260 -0.4657 11 7 8.3787 3.1893 -0.0892 12 6 9.5235 3.7975 0.2795 13 8 9.5391 4.9946 0.4728 14 6 10.7841 2.9899 0.4514 15 6 11.9219 3.9142 0.8912 16 6 13.2423 3.1343 0.8146 17 7 13.4385 2.7261 -0.5842 18 6 12.3575 2.2156 -1.2921 19 6 11.1281 2.3219 -0.8491 20 6 10.0105 1.7488 -1.6820 21 8 9.3208 0.7483 -0.9300 22 14 10.7164 0.9866 -3.2285 23 6 6.1184 3.7504 0.8583 24 6 3.3019 3.6757 0.0002 25 6 1.9209 3.6047 0.0002 26 6 1.2914 2.3753 -0.0002 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 4.0207 0.3799 -0.0091 31 1 5.4476 4.0503 -1.6644 32 1 6.5928 2.6708 -1.9547 33 1 8.3661 2.2317 -0.2437 34 1 10.6243 2.2298 1.2162 35 1 11.9680 4.7786 0.2287 36 1 11.7503 4.2439 1.9159 37 1 13.1886 2.2524 1.4529 38 1 14.0678 3.7711 1.1330 39 1 14.3079 2.8114 -1.0056 40 1 12.5350 1.7171 -2.2336 41 1 9.3152 2.5432 -1.9531 42 1 9.8794 0.0087 -0.6543 43 1 11.6898 -0.0766 -2.8720 44 1 9.6242 0.4184 -4.0588 45 1 6.5564 3.4213 1.8007 46 1 5.4231 4.5805 0.9819 47 1 3.7923 4.6381 0.0000 48 1 1.3340 4.5113 0.0002 49 1 0.2128 2.3203 -0.0006 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_15608500.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:40 Heat of formation + Delta-G solvation = -18.137960 kcal Electronic energy + Delta-G solvation = -30765.489124 eV Core-core repulsion = 26660.874550 eV Total energy + Delta-G solvation = -4104.614574 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.177 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -41.89539 -41.19255 -40.17152 -39.01909 -37.99515 -37.63256 -34.44566 -33.29635 -32.73898 -32.05721 -30.91189 -28.26190 -27.44170 -26.71059 -26.40863 -25.28509 -23.60619 -23.25358 -22.40425 -21.84780 -20.27609 -19.28429 -19.08496 -18.70663 -18.07340 -17.41098 -17.25484 -16.99988 -16.88265 -16.69292 -16.42030 -16.08264 -15.78273 -15.67593 -15.47906 -15.05451 -14.73553 -14.55048 -14.46690 -14.38376 -14.14334 -13.89743 -13.78834 -13.45684 -13.28415 -13.14995 -13.11053 -12.73729 -12.63466 -12.32733 -12.23111 -12.12688 -11.94689 -11.71988 -11.66390 -11.58453 -11.38073 -11.24852 -10.76725 -10.45975 -9.90917 -9.76908 -9.17844 -8.43924 -4.88639 0.30201 0.45290 1.24076 1.36726 1.59399 1.74234 1.99823 2.30270 2.33315 2.67486 2.71414 3.32056 3.48383 3.67144 3.70711 3.71748 3.85538 3.87964 3.94405 3.99275 4.08374 4.16291 4.22416 4.25839 4.33072 4.33507 4.36444 4.39464 4.52006 4.60609 4.62989 4.64588 4.68899 4.70325 4.75417 4.80885 4.83441 4.90652 4.97440 4.98705 5.07926 5.18285 5.22621 5.28901 5.31608 5.43953 5.47268 5.60214 5.71561 5.80399 6.30644 6.41536 6.49645 6.78108 6.98307 7.35305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.111 3.889 4 C -0.169 4.169 5 C -0.033 4.033 6 C -0.068 4.068 7 H 0.097 0.903 8 C -0.124 4.124 9 C 0.111 3.889 10 H 0.089 0.911 11 N -0.703 5.703 12 C 0.523 3.477 13 O -0.586 6.586 14 C -0.033 4.033 15 C -0.119 4.119 16 C 0.123 3.877 17 N -0.744 5.744 18 C 0.166 3.834 19 C -0.299 4.299 20 C -0.069 4.069 21 O -0.552 6.552 22 Si 0.747 3.253 23 C -0.138 4.138 24 C -0.160 4.160 25 C -0.082 4.082 26 C -0.220 4.220 27 H 0.115 0.885 28 H 0.063 0.937 29 H 0.064 0.936 30 H 0.126 0.874 31 H 0.106 0.894 32 H 0.078 0.922 33 H 0.420 0.580 34 H 0.099 0.901 35 H 0.060 0.940 36 H 0.074 0.926 37 H 0.068 0.932 38 H 0.100 0.900 39 H 0.415 0.585 40 H 0.151 0.849 41 H 0.106 0.894 42 H 0.392 0.608 43 H -0.274 1.274 44 H -0.307 1.307 45 H 0.063 0.937 46 H 0.103 0.897 47 H 0.140 0.860 48 H 0.146 0.854 49 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.833 -1.418 -1.586 3.543 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.255 6.255 3 C 0.066 3.934 4 C -0.187 4.187 5 C -0.033 4.033 6 C -0.086 4.086 7 H 0.116 0.884 8 C -0.162 4.162 9 C 0.005 3.995 10 H 0.108 0.892 11 N -0.362 5.362 12 C 0.311 3.689 13 O -0.466 6.466 14 C -0.054 4.054 15 C -0.158 4.158 16 C -0.002 4.002 17 N -0.374 5.374 18 C 0.043 3.957 19 C -0.310 4.310 20 C -0.179 4.179 21 O -0.361 6.361 22 Si 0.653 3.347 23 C -0.177 4.177 24 C -0.178 4.178 25 C -0.099 4.099 26 C -0.239 4.239 27 H 0.133 0.867 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.144 0.856 31 H 0.125 0.875 32 H 0.096 0.904 33 H 0.265 0.735 34 H 0.117 0.883 35 H 0.079 0.921 36 H 0.093 0.907 37 H 0.086 0.914 38 H 0.118 0.882 39 H 0.251 0.749 40 H 0.167 0.833 41 H 0.124 0.876 42 H 0.244 0.756 43 H -0.201 1.201 44 H -0.236 1.236 45 H 0.082 0.918 46 H 0.121 0.879 47 H 0.158 0.842 48 H 0.164 0.836 49 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 2.519 -1.119 -1.870 3.331 hybrid contribution -0.489 -1.152 0.824 1.499 sum 2.030 -2.271 -1.046 3.221 Atomic orbital electron populations 1.23302 0.76582 1.05395 1.02175 1.86040 1.23356 1.27280 1.88787 1.19260 0.92651 0.84766 0.96764 1.20476 0.91636 0.98729 1.07900 1.19585 0.95247 0.92022 0.96423 1.21576 0.90091 0.99156 0.97775 0.88434 1.23353 0.97162 0.99750 0.95923 1.21846 0.84059 0.96512 0.97054 0.89240 1.46372 1.07788 1.13399 1.68686 1.21003 0.85590 0.87650 0.74633 1.90662 1.86512 1.16982 1.52432 1.19633 0.91701 0.96730 0.97353 1.21693 0.94321 0.97688 1.02106 1.21672 0.97095 0.98640 0.82795 1.44683 1.11032 1.69295 1.12416 1.20594 0.87176 0.92802 0.95146 1.20396 0.94262 1.15053 1.01320 1.25007 0.97179 0.93765 1.01917 1.86197 1.41312 1.35361 1.73255 0.94265 0.78808 0.84299 0.77321 1.23578 0.97982 0.98587 0.97524 1.21171 0.93886 0.98626 1.04080 1.21257 0.94842 0.97646 0.96195 1.21494 1.00971 0.92292 1.09128 0.86685 0.91806 0.91757 0.85590 0.87519 0.90355 0.73538 0.88298 0.92095 0.90713 0.91429 0.88181 0.74863 0.83261 0.87587 0.75643 1.20054 1.23589 0.91798 0.87883 0.84182 0.83600 0.84015 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 113.37 1.11 1.10 16 2 O -0.34 -2.46 10.50 -92.39 -0.97 -3.43 16 3 C 0.11 0.81 6.69 22.51 0.15 0.96 16 4 C -0.17 -1.17 9.65 22.37 0.22 -0.96 16 5 C -0.03 -0.13 5.29 -19.88 -0.11 -0.24 16 6 C -0.07 -0.12 3.87 -10.92 -0.04 -0.16 16 7 H 0.10 0.21 8.10 -2.39 -0.02 0.19 16 8 C -0.12 -0.07 7.28 31.12 0.23 0.16 16 9 C 0.11 0.39 4.32 45.52 0.20 0.59 16 10 H 0.09 0.59 7.46 -2.39 -0.02 0.57 16 11 N -0.70 -2.80 3.71 -440.04 -1.63 -4.44 16 12 C 0.52 3.94 6.82 87.66 0.60 4.54 16 13 O -0.59 -8.97 15.40 -3.01 -0.05 -9.02 16 14 C -0.03 -0.06 2.64 -12.43 -0.03 -0.09 16 15 C -0.12 -0.14 4.92 30.79 0.15 0.01 16 16 C 0.12 -0.58 7.16 86.46 0.62 0.04 16 17 N -0.74 4.24 5.83 -345.87 -2.02 2.22 16 18 C 0.17 -0.71 9.63 83.42 0.80 0.09 16 19 C -0.30 0.44 5.11 -16.75 -0.09 0.36 16 20 C -0.07 0.13 1.68 71.24 0.12 0.25 16 21 O -0.55 1.21 10.41 -148.98 -1.55 -0.34 16 22 Si 0.75 -2.46 29.68 68.60 2.04 -0.42 16 23 C -0.14 -0.33 7.26 31.21 0.23 -0.10 16 24 C -0.16 -0.38 8.61 22.28 0.19 -0.19 16 25 C -0.08 -0.17 10.04 22.25 0.22 0.05 16 26 C -0.22 -0.84 9.04 22.37 0.20 -0.64 16 27 H 0.11 -0.49 8.14 -2.39 -0.02 -0.51 16 28 H 0.06 -0.17 7.66 -2.39 -0.02 -0.19 16 29 H 0.06 -0.18 7.66 -2.39 -0.02 -0.19 16 30 H 0.13 0.78 8.06 -2.91 -0.02 0.76 16 31 H 0.11 -0.12 7.72 -2.39 -0.02 -0.13 16 32 H 0.08 0.04 8.14 -2.39 -0.02 0.02 16 33 H 0.42 0.83 4.72 -92.71 -0.44 0.39 16 34 H 0.10 0.01 8.14 -2.39 -0.02 0.00 16 35 H 0.06 0.35 7.75 -2.39 -0.02 0.34 16 36 H 0.07 0.14 8.14 -2.38 -0.02 0.12 16 37 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 38 H 0.10 -0.78 8.14 -2.38 -0.02 -0.80 16 39 H 0.41 -4.08 8.96 -92.71 -0.83 -4.91 16 40 H 0.15 -1.23 4.36 -2.91 -0.01 -1.24 16 41 H 0.11 0.04 6.18 -2.39 -0.01 0.02 16 42 H 0.39 -3.01 8.70 -74.05 -0.64 -3.65 16 43 H -0.27 0.25 7.10 99.48 0.71 0.96 16 44 H -0.31 -1.64 7.11 99.48 0.71 -0.93 16 45 H 0.06 0.28 8.14 -2.38 -0.02 0.26 16 46 H 0.10 0.06 6.33 -2.39 -0.02 0.05 16 47 H 0.14 -0.17 6.66 -2.91 -0.02 -0.19 16 48 H 0.15 -0.39 8.06 -2.91 -0.02 -0.41 16 49 H 0.14 -0.04 6.30 -2.91 -0.02 -0.06 16 Total: 0.00 -19.32 381.21 -0.28 -19.60 By element: Atomic # 1 Polarization: -9.04 SS G_CDS: -0.87 Total: -9.91 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: 4.77 Total: 5.74 kcal Atomic # 7 Polarization: 1.43 SS G_CDS: -3.65 Total: -2.22 kcal Atomic # 8 Polarization: -10.22 SS G_CDS: -2.57 Total: -12.79 kcal Atomic # 14 Polarization: -2.46 SS G_CDS: 2.04 Total: -0.42 kcal Total: -19.32 -0.28 -19.60 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_15608500.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.462 kcal (2) G-P(sol) polarization free energy of solvation -19.317 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.600 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.138 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds