Wall clock time and date at job start Sat Mar 6 2021 14:40:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35897 * 116.99694 * 2 1 4 4 C 1.38715 * 120.04944 * 180.02562 * 3 2 1 5 5 C 1.38169 * 119.94083 * 180.02562 * 4 3 2 6 6 C 1.50706 * 119.96932 * 179.97438 * 5 4 3 7 7 H 1.08994 * 112.84919 * 11.19257 * 6 5 4 8 8 C 1.54046 * 113.69280 * 142.46633 * 6 5 4 9 9 C 1.53777 * 86.98547 * 139.98888 * 8 6 5 10 10 H 1.09002 * 113.61528 * 219.97756 * 9 8 6 11 11 N 1.46505 * 113.61744 * 89.15811 * 9 8 6 12 12 C 1.34775 * 119.99852 * 105.86251 * 11 9 8 13 13 O 1.21286 * 120.00166 * 0.02562 * 12 11 9 14 14 C 1.50693 * 120.00013 * 180.02562 * 12 11 9 15 15 O 1.42903 * 109.47691 * 180.02562 * 14 12 11 16 16 C 1.35893 * 117.00583 * 180.02562 * 15 14 12 17 17 C 1.38709 * 120.05819 * 179.97438 * 16 15 14 18 18 C 1.50698 * 120.02582 * 0.02562 * 17 16 15 19 19 O 1.42906 * 109.47154 * 284.71727 * 18 17 16 20 20 Si 1.86300 * 109.47338 * 164.71937 * 18 17 16 21 21 C 1.38163 * 119.94656 * 179.71995 * 17 16 15 22 22 C 1.38245 * 120.05555 * 0.28485 * 21 17 16 23 23 C 1.38290 * 120.11120 * 359.97147 * 22 21 17 24 24 C 1.38120 * 120.05282 * 0.02562 * 23 22 21 25 25 C 1.53775 * 87.17308 * 334.56695 * 9 8 6 26 26 C 1.38242 * 120.05784 * 0.24607 * 5 4 3 27 27 C 1.38295 * 120.10871 * 359.49744 * 26 5 4 28 28 C 1.38124 * 120.05383 * 0.50480 * 27 26 5 29 29 H 1.08995 * 109.47566 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.46846 * 300.00502 * 1 2 3 31 31 H 1.09002 * 109.46959 * 59.99984 * 1 2 3 32 32 H 1.07998 * 120.02896 * 359.97438 * 4 3 2 33 33 H 1.08993 * 113.61771 * 25.48420 * 8 6 5 34 34 H 1.09010 * 113.69601 * 254.50073 * 8 6 5 35 35 H 0.96991 * 120.00052 * 285.86351 * 11 9 8 36 36 H 1.09000 * 109.47379 * 60.00435 * 14 12 11 37 37 H 1.09002 * 109.47546 * 300.00196 * 14 12 11 38 38 H 1.09001 * 109.47612 * 44.72182 * 18 17 16 39 39 H 0.96698 * 113.99401 * 59.99915 * 19 18 17 40 40 H 1.48506 * 110.00048 * 300.00058 * 20 18 17 41 41 H 1.48502 * 109.99996 * 61.31383 * 20 18 17 42 42 H 1.08001 * 119.97764 * 180.25817 * 21 17 16 43 43 H 1.07995 * 119.94747 * 179.97438 * 22 21 17 44 44 H 1.07999 * 119.97301 * 180.02562 * 23 22 21 45 45 H 1.08010 * 120.02573 * 179.97438 * 24 23 22 46 46 H 1.09003 * 113.61726 * 140.01775 * 25 9 8 47 47 H 1.08997 * 113.62244 * 270.92650 * 25 9 8 48 48 H 1.08002 * 119.94602 * 179.72537 * 26 5 4 49 49 H 1.08000 * 119.97013 * 180.23311 * 27 26 5 50 50 H 1.07996 * 120.02429 * 179.72900 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4312 1.2848 -0.0005 5 6 4.0560 2.5171 0.0000 6 6 5.5609 2.5981 0.0000 7 1 6.0365 1.6370 -0.1954 8 6 6.1189 3.7487 -0.8589 9 6 7.1529 3.9721 0.2572 10 1 7.3508 5.0237 0.4650 11 7 8.3772 3.1852 0.0891 12 6 9.5152 3.7866 -0.3108 13 8 9.5258 4.9792 -0.5311 14 6 10.7743 2.9772 -0.4843 15 8 11.8361 3.8333 -0.9107 16 6 13.0495 3.2565 -1.1154 17 6 14.1246 4.0285 -1.5304 18 6 13.9484 5.5083 -1.7543 19 8 13.2455 5.7244 -2.9796 20 14 15.6200 6.3260 -1.8449 21 6 15.3585 3.4407 -1.7323 22 6 15.5208 2.0833 -1.5266 23 6 14.4493 1.3105 -1.1180 24 6 13.2137 1.8934 -0.9148 25 6 6.1381 3.3343 1.2205 26 6 3.3020 3.6758 0.0062 27 6 1.9209 3.6047 0.0014 28 6 1.2915 2.3753 0.0009 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 4.0206 0.3798 -0.0005 33 1 5.4232 4.5787 -0.9821 34 1 6.5575 3.4194 -1.8009 35 1 8.3689 2.2316 0.2656 36 1 10.6084 2.2030 -1.2335 37 1 11.0415 2.5128 0.4649 38 1 13.3793 5.9356 -0.9287 39 1 12.3650 5.3254 -3.0034 40 1 16.3612 6.1086 -0.5766 41 1 16.3938 5.7747 -2.9862 42 1 16.1970 4.0421 -2.0514 43 1 16.4861 1.6257 -1.6854 44 1 14.5787 0.2504 -0.9576 45 1 12.3770 1.2893 -0.5960 46 1 6.5921 2.6704 1.9563 47 1 5.4476 4.0510 1.6649 48 1 3.7924 4.6380 0.0111 49 1 1.3341 4.5114 0.0025 50 1 0.2129 2.3204 0.0016 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_2989392.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:47 Heat of formation + Delta-G solvation = -51.483167 kcal Electronic energy + Delta-G solvation = -32003.567108 eV Core-core repulsion = 27543.335635 eV Total energy + Delta-G solvation = -4460.231473 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -41.87625 -41.48535 -40.81955 -39.74451 -38.53702 -37.82675 -37.50362 -34.64230 -32.84857 -32.20110 -31.43436 -30.97106 -29.39243 -28.24107 -26.70829 -26.69893 -25.95709 -23.90251 -23.56527 -22.69593 -22.37931 -21.85243 -20.31932 -19.51994 -18.80254 -18.39542 -18.25387 -17.56456 -17.38423 -17.23979 -16.93849 -16.73708 -16.70504 -16.68003 -15.99228 -15.82898 -15.69487 -15.51818 -15.21837 -15.13222 -14.80263 -14.45022 -14.33379 -14.13523 -14.01747 -13.73447 -13.57677 -13.46209 -13.27100 -13.18513 -12.82491 -12.69719 -12.68069 -12.30917 -12.28769 -12.19860 -12.11987 -11.66067 -11.59817 -11.28010 -11.26988 -11.09450 -11.01992 -10.18755 -10.10548 -9.75607 -9.36448 -9.16586 -4.84789 0.08682 0.24988 0.31587 0.46750 1.33179 1.37873 1.39263 1.59628 1.88568 2.34168 2.49054 2.56035 2.72574 3.43658 3.45081 3.53771 3.66563 3.68657 3.72782 3.86730 3.87989 3.92978 3.94217 4.00073 4.04166 4.08587 4.16674 4.18024 4.19481 4.26760 4.33583 4.37837 4.38326 4.53439 4.53969 4.61374 4.64659 4.70092 4.77824 4.81804 4.83272 4.96006 5.01025 5.08877 5.12088 5.12686 5.23237 5.33346 5.37172 5.45375 5.50685 5.58261 5.69098 5.81492 6.14512 6.40941 6.42519 6.52133 7.08633 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.165 4.165 5 C -0.035 4.035 6 C -0.067 4.067 7 H 0.113 0.887 8 C -0.141 4.141 9 C 0.118 3.882 10 H 0.086 0.914 11 N -0.692 5.692 12 C 0.517 3.483 13 O -0.566 6.566 14 C 0.036 3.964 15 O -0.312 6.312 16 C 0.127 3.873 17 C -0.165 4.165 18 C -0.089 4.089 19 O -0.547 6.547 20 Si 0.811 3.189 21 C -0.104 4.104 22 C -0.156 4.156 23 C -0.075 4.075 24 C -0.202 4.202 25 C -0.122 4.122 26 C -0.161 4.161 27 C -0.085 4.085 28 C -0.222 4.222 29 H 0.115 0.885 30 H 0.063 0.937 31 H 0.062 0.938 32 H 0.134 0.866 33 H 0.097 0.903 34 H 0.069 0.931 35 H 0.421 0.579 36 H 0.125 0.875 37 H 0.124 0.876 38 H 0.069 0.931 39 H 0.369 0.631 40 H -0.265 1.265 41 H -0.281 1.281 42 H 0.124 0.876 43 H 0.146 0.854 44 H 0.160 0.840 45 H 0.165 0.835 46 H 0.091 0.909 47 H 0.101 0.899 48 H 0.138 0.862 49 H 0.142 0.858 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.544 -5.225 3.198 7.077 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.183 4.183 5 C -0.035 4.035 6 C -0.085 4.085 7 H 0.131 0.869 8 C -0.180 4.180 9 C 0.012 3.988 10 H 0.104 0.896 11 N -0.346 5.346 12 C 0.303 3.697 13 O -0.444 6.444 14 C -0.041 4.041 15 O -0.225 6.225 16 C 0.082 3.918 17 C -0.166 4.166 18 C -0.196 4.196 19 O -0.353 6.353 20 Si 0.712 3.288 21 C -0.121 4.121 22 C -0.174 4.174 23 C -0.093 4.093 24 C -0.221 4.221 25 C -0.160 4.160 26 C -0.179 4.179 27 C -0.103 4.103 28 C -0.241 4.241 29 H 0.133 0.867 30 H 0.082 0.918 31 H 0.081 0.919 32 H 0.151 0.849 33 H 0.116 0.884 34 H 0.087 0.913 35 H 0.259 0.741 36 H 0.143 0.857 37 H 0.142 0.858 38 H 0.087 0.913 39 H 0.218 0.782 40 H -0.191 1.191 41 H -0.208 1.208 42 H 0.141 0.859 43 H 0.164 0.836 44 H 0.177 0.823 45 H 0.182 0.818 46 H 0.110 0.890 47 H 0.120 0.880 48 H 0.156 0.844 49 H 0.160 0.840 50 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -2.150 -4.168 2.914 5.521 hybrid contribution -1.541 -1.806 0.249 2.387 sum -3.691 -5.974 3.163 7.702 Atomic orbital electron populations 1.23291 0.76678 1.05381 1.02085 1.86039 1.23254 1.27302 1.88792 1.19303 0.92909 0.84599 0.96793 1.20513 0.91405 0.98892 1.07502 1.19632 0.95657 0.91787 0.96408 1.21678 0.89788 0.99589 0.97424 0.86893 1.23600 0.97834 0.98806 0.97741 1.21836 0.83212 0.96295 0.97410 0.89564 1.45348 1.07887 1.13045 1.68352 1.20433 0.85149 0.87733 0.76355 1.90777 1.85702 1.17267 1.50642 1.22747 0.84167 0.92769 1.04444 1.86072 1.16521 1.37349 1.82591 1.18912 0.84433 0.92239 0.96241 1.19861 0.93083 0.96971 1.06689 1.25462 1.10305 0.94205 0.89671 1.86639 1.33548 1.79122 1.36024 0.92310 0.69103 0.89932 0.77472 1.21018 0.95509 0.96496 0.99112 1.21392 1.01026 0.93011 1.01973 1.21421 0.91406 1.01421 0.95018 1.21673 1.00800 0.92759 1.06839 1.23358 0.96727 0.99869 0.96000 1.21177 0.93795 0.98825 1.04101 1.21243 0.95057 0.97534 0.96434 1.21484 1.00920 0.92462 1.09227 0.86663 0.91849 0.91938 0.84854 0.88429 0.91253 0.74142 0.85707 0.85807 0.91327 0.78245 1.19080 1.20798 0.85871 0.83637 0.82281 0.81761 0.89011 0.88018 0.84377 0.84037 0.84364 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -1.56 10.50 -92.40 -0.97 -2.53 16 3 C 0.11 0.47 6.69 22.51 0.15 0.62 16 4 C -0.16 -0.39 9.65 22.37 0.22 -0.17 16 5 C -0.03 0.02 5.29 -19.88 -0.11 -0.08 16 6 C -0.07 0.35 3.87 -10.92 -0.04 0.31 16 7 H 0.11 -0.91 8.09 -2.39 -0.02 -0.93 16 8 C -0.14 0.48 7.27 31.21 0.23 0.71 16 9 C 0.12 -0.39 4.29 45.51 0.20 -0.19 16 10 H 0.09 0.14 7.50 -2.39 -0.02 0.12 16 11 N -0.69 3.84 5.26 -440.05 -2.32 1.53 16 12 C 0.52 0.57 7.91 87.66 0.69 1.27 16 13 O -0.57 -7.01 16.12 15.99 0.26 -6.75 16 14 C 0.04 -0.15 5.22 71.23 0.37 0.22 16 15 O -0.31 -1.48 8.60 -73.31 -0.63 -2.11 16 16 C 0.13 0.58 6.63 22.51 0.15 0.73 16 17 C -0.16 -1.29 5.28 -19.77 -0.10 -1.40 16 18 C -0.09 -0.72 2.33 71.24 0.17 -0.56 16 19 O -0.55 -5.58 12.65 -148.98 -1.89 -7.47 16 20 Si 0.81 3.54 30.40 68.60 2.09 5.63 16 21 C -0.10 -0.67 8.66 22.25 0.19 -0.48 16 22 C -0.16 -0.31 10.04 22.28 0.22 -0.08 16 23 C -0.07 0.11 10.04 22.25 0.22 0.33 16 24 C -0.20 0.26 9.04 22.37 0.20 0.46 16 25 C -0.12 0.80 7.29 31.12 0.23 1.02 16 26 C -0.16 0.10 8.60 22.28 0.19 0.29 16 27 C -0.08 -0.01 10.04 22.26 0.22 0.21 16 28 C -0.22 -0.40 9.04 22.36 0.20 -0.19 16 29 H 0.12 -0.70 8.14 -2.39 -0.02 -0.71 16 30 H 0.06 -0.27 7.66 -2.39 -0.02 -0.29 16 31 H 0.06 -0.26 7.66 -2.39 -0.02 -0.28 16 32 H 0.13 0.04 8.05 -2.91 -0.02 0.02 16 33 H 0.10 -0.31 6.34 -2.39 -0.02 -0.33 16 34 H 0.07 -0.12 8.14 -2.38 -0.02 -0.14 16 35 H 0.42 -5.36 8.70 -92.72 -0.81 -6.16 16 36 H 0.13 -1.28 7.65 -2.39 -0.02 -1.30 16 37 H 0.12 -1.25 7.67 -2.39 -0.02 -1.27 16 38 H 0.07 0.59 7.82 -2.39 -0.02 0.57 16 39 H 0.37 2.95 8.64 -74.06 -0.64 2.31 16 40 H -0.26 -1.71 7.11 99.48 0.71 -1.00 16 41 H -0.28 -2.45 6.81 99.48 0.68 -1.78 16 42 H 0.12 0.77 4.94 -2.91 -0.01 0.76 16 43 H 0.15 -0.33 8.06 -2.91 -0.02 -0.35 16 44 H 0.16 -1.20 8.06 -2.91 -0.02 -1.22 16 45 H 0.16 -1.46 6.30 -2.91 -0.02 -1.48 16 46 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 47 H 0.10 -0.62 7.71 -2.39 -0.02 -0.63 16 48 H 0.14 -0.54 6.68 -2.91 -0.02 -0.56 16 49 H 0.14 -0.55 8.06 -2.91 -0.02 -0.57 16 50 H 0.14 -0.23 6.30 -2.91 -0.02 -0.25 16 Total: 0.00 -24.74 410.74 0.81 -23.93 By element: Atomic # 1 Polarization: -15.86 SS G_CDS: -0.45 Total: -16.31 kcal Atomic # 6 Polarization: -0.64 SS G_CDS: 4.72 Total: 4.08 kcal Atomic # 7 Polarization: 3.84 SS G_CDS: -2.32 Total: 1.53 kcal Atomic # 8 Polarization: -15.63 SS G_CDS: -3.23 Total: -18.86 kcal Atomic # 14 Polarization: 3.54 SS G_CDS: 2.09 Total: 5.63 kcal Total: -24.74 0.81 -23.93 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_2989392.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.551 kcal (2) G-P(sol) polarization free energy of solvation -24.742 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.293 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.810 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.932 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.483 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds